RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 C16orf95Q9H693 158 aa6.73□□□□□ -1.33
CDH13-204ENST00000539548 KLK5Q9Y337 293 aaPredicted RBP6.73□□□□□ -1.33
CDH13-204ENST00000539548 LECT2O14960 151 aa6.72□□□□□ -1.33
CDH13-204ENST00000539548 HIST1H4AP62805 103 aaKnown RBP6.72□□□□□ -1.33
CDH13-204ENST00000539548 LINC01006Q8NI28 216 aa6.72□□□□□ -1.33
CDH13-204ENST00000539548 C14orf132Q9NPU4 83 aa6.72□□□□□ -1.33
CDH13-204ENST00000539548 SETD2Q9BYW2 2564 aaPredicted RBP6.72□□□□□ -1.33
CDH13-204ENST00000539548 NOTCH3Q9UM47 2321 aa6.72□□□□□ -1.33
CDH13-204ENST00000539548 LINC01561Q8N1V8 128 aa6.72□□□□□ -1.33
CDH13-204ENST00000539548 OR13C6PQ8NH95 151 aa6.72□□□□□ -1.33
CDH13-204ENST00000539548 KIR2DL5BQ8NHK3 375 aa6.72□□□□□ -1.33
CDH13-204ENST00000539548 ITPR3Q14573 2671 aa6.72□□□□□ -1.33
CDH13-204ENST00000539548 AKAP9Q99996 3911 aa6.72□□□□□ -1.33
CDH13-204ENST00000539548 OTOGQ6ZRI0 2925 aa6.72□□□□□ -1.33
CDH13-204ENST00000539548 A0A1B0GUV1 79 aa6.71□□□□□ -1.33
CDH13-204ENST00000539548 SS18Q15532 418 aa6.71□□□□□ -1.33
CDH13-204ENST00000539548 C9orf153Q5TBE3 101 aa6.71□□□□□ -1.33
CDH13-204ENST00000539548 Q6JHZ5 121 aa6.71□□□□□ -1.33
CDH13-204ENST00000539548 Q8IZM0 81 aa6.71□□□□□ -1.33
CDH13-204ENST00000539548 LINC00612Q8N6U2 182 aa6.71□□□□□ -1.33
CDH13-204ENST00000539548 C3orf56Q8N813 242 aa6.71□□□□□ -1.34
CDH13-204ENST00000539548 APCP25054 2843 aa6.7□□□□□ -1.34
CDH13-204ENST00000539548 COX7CP15954 63 aa6.7□□□□□ -1.34
CDH13-204ENST00000539548 C2orf48Q96LS8 159 aa6.7□□□□□ -1.34
CDH13-204ENST00000539548 LINC00167Q96N53 147 aa6.7□□□□□ -1.34
CDH13-204ENST00000539548 ATOX1O00244 68 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 LINC00846Q9NV44 126 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 ORMDL1Q9P0S3 153 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 MTORP42345 2549 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 A0A1B0GX51 115 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 NCR3O14931 201 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 SLPIP03973 132 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 RNASE1P07998 156 aaKnown RBP6.69□□□□□ -1.34
CDH13-204ENST00000539548 DEFB130BP0DP73 79 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 DEFB130AP0DP74 79 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 GYPEP15421 78 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 XCL1P47992 114 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 WFDC11Q8NEX6 87 aa6.69□□□□□ -1.34
CDH13-204ENST00000539548 CCDC168Q8NDH2 2452 aa6.68□□□□□ -1.34
CDH13-204ENST00000539548 C11orf68Q9H3H3 251 aaKnown RBP6.68□□□□□ -1.34
CDH13-204ENST00000539548 F8P00451 2351 aa6.68□□□□□ -1.34
CDH13-204ENST00000539548 NDUFC2O95298 119 aa6.67□□□□□ -1.34
CDH13-204ENST00000539548 CCKP06307 115 aa6.67□□□□□ -1.34
CDH13-204ENST00000539548 NANOS2P60321 138 aaKnown RBP6.67□□□□□ -1.34
CDH13-204ENST00000539548 RPL18AQ02543 176 aaKnown RBP6.67□□□□□ -1.34
CDH13-204ENST00000539548 TLN2Q9Y4G6 2542 aa6.67□□□□□ -1.34
CDH13-204ENST00000539548 IGKV3D-7A0A0C4DH55 119 aa6.67□□□□□ -1.34
CDH13-204ENST00000539548 CRYGAP11844 174 aa6.67□□□□□ -1.34
CDH13-204ENST00000539548 COX17Q14061 63 aa6.67□□□□□ -1.34
CDH13-204ENST00000539548 PDZD2O15018 2839 aa6.66□□□□□ -1.34
CDH13-204ENST00000539548 KIAA0087Q14695 138 aa6.66□□□□□ -1.34
CDH13-204ENST00000539548 Q8N814 137 aa6.66□□□□□ -1.34
CDH13-204ENST00000539548 PRO0255Q9UI72 69 aa6.66□□□□□ -1.34
CDH13-204ENST00000539548 JMJD7-PLA2G4BH0Y9G9 81 aa6.65□□□□□ -1.34
CDH13-204ENST00000539548 JMJD1CQ15652 2540 aa6.65□□□□□ -1.35
CDH13-204ENST00000539548 SMIM9A6NGZ8 99 aa6.65□□□□□ -1.35
CDH13-204ENST00000539548 CD164L2Q6UWJ8 174 aa6.65□□□□□ -1.35
CDH13-204ENST00000539548 SONP18583 2426 aaKnown RBP6.64□□□□□ -1.35
CDH13-204ENST00000539548 IGHV4-28A0A0C4DH34 117 aa6.64□□□□□ -1.35
CDH13-204ENST00000539548 TMEM256-PLSCR3K7ERE1 68 aa6.64□□□□□ -1.35
CDH13-204ENST00000539548 PRR3P79522 188 aaKnown RBP6.64□□□□□ -1.35
CDH13-204ENST00000539548 KRTAP1-1Q07627 177 aa6.64□□□□□ -1.35
CDH13-204ENST00000539548 X6R8D5 127 aa6.64□□□□□ -1.35
CDH13-204ENST00000539548 S100A7L2Q5SY68 101 aa6.64□□□□□ -1.35
CDH13-204ENST00000539548 CFAP161Q6P656 301 aa6.64□□□□□ -1.35
CDH13-204ENST00000539548 CLPSL2Q6UWE3 100 aa6.64□□□□□ -1.35
CDH13-204ENST00000539548 HIVEP1P15822 2718 aa6.63□□□□□ -1.35
CDH13-204ENST00000539548 LINC00269Q8N2A0 174 aa6.63□□□□□ -1.35
CDH13-204ENST00000539548 NF1P21359 2839 aa6.62□□□□□ -1.35
CDH13-204ENST00000539548 SERP2Q8N6R1 65 aa6.62□□□□□ -1.35
CDH13-204ENST00000539548 CHCHD10Q8WYQ3 142 aaPredicted RBP6.62□□□□□ -1.35
CDH13-204ENST00000539548 A0A087WVE0 104 aa6.61□□□□□ -1.35
CDH13-204ENST00000539548 A0A096LPF7 62 aa6.61□□□□□ -1.35
CDH13-204ENST00000539548 LYRM9A8MSI8 78 aa6.61□□□□□ -1.35
CDH13-204ENST00000539548 USP17L23D6RBM5 183 aa6.61□□□□□ -1.35
CDH13-204ENST00000539548 hADV29S1A0JD25 119 aa6.61□□□□□ -1.35
CDH13-204ENST00000539548 ATP5EP2Q5VTU8 51 aa6.61□□□□□ -1.35
CDH13-204ENST00000539548 LYPD5Q6UWN5 251 aa6.61□□□□□ -1.35
CDH13-204ENST00000539548 ZNF469Q96JG9 3925 aaPredicted RBP6.6□□□□□ -1.35
CDH13-204ENST00000539548 HILS1P60008 231 aa6.6□□□□□ -1.35
CDH13-204ENST00000539548 REG3AQ06141 175 aa6.6□□□□□ -1.35
CDH13-204ENST00000539548 UPK3BQ9BT76 320 aa6.6□□□□□ -1.35
CDH13-204ENST00000539548 C9orf116Q5BN46 136 aaPredicted RBP6.59□□□□□ -1.35
CDH13-204ENST00000539548 LINC00575Q6W349 94 aa6.59□□□□□ -1.35
CDH13-204ENST00000539548 LINC00482Q8N8I6 264 aa6.59□□□□□ -1.35
CDH13-204ENST00000539548 MUC7Q8TAX7 377 aa6.59□□□□□ -1.35
CDH13-204ENST00000539548 NIPBLQ6KC79 2804 aaeCLIP6.59□□□□□ -1.35
CDH13-204ENST00000539548 ANGP03950 147 aaKnown RBP6.59□□□□□ -1.35
CDH13-204ENST00000539548 RPS28P62857 69 aaKnown RBP6.59□□□□□ -1.35
CDH13-204ENST00000539548 C6orf99Q4VX62 202 aa6.59□□□□□ -1.35
CDH13-204ENST00000539548 Q8NDZ9 215 aa6.59□□□□□ -1.35
CDH13-204ENST00000539548 IGLV10-54A0A075B6I4 117 aa6.58□□□□□ -1.36
CDH13-204ENST00000539548 TRBV10-3A0A0K0K1G6 114 aa6.58□□□□□ -1.36
CDH13-204ENST00000539548 J3KT08 172 aa6.58□□□□□ -1.36
CDH13-204ENST00000539548 FLNAP21333 2647 aaKnown RBP6.58□□□□□ -1.36
CDH13-204ENST00000539548 KRTAP10-3P60369 221 aa6.58□□□□□ -1.36
CDH13-204ENST00000539548 Q8N3U1 123 aa6.57□□□□□ -1.36
CDH13-204ENST00000539548 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
CDH13-204ENST00000539548 A0A0J9YWU9 116 aa6.57□□□□□ -1.36
CDH13-204ENST00000539548 IGHV4-30-4P0DP06 118 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms