RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 M0QXV9 152 aa11.64□□□□□ -0.55
TNFRSF1A-212ENST00000539372 IGLV7-43P04211 117 aa11.64□□□□□ -0.55
TNFRSF1A-212ENST00000539372 ALKBH7Q9BT30 221 aaPredicted RBP11.64□□□□□ -0.55
TNFRSF1A-212ENST00000539372 GNB1LQ9BYB4 327 aa11.64□□□□□ -0.55
TNFRSF1A-212ENST00000539372 SEC11AP67812 179 aa11.63□□□□□ -0.55
TNFRSF1A-212ENST00000539372 ERASQ7Z444 233 aa11.63□□□□□ -0.55
TNFRSF1A-212ENST00000539372 Q8IZM0 81 aa11.63□□□□□ -0.55
TNFRSF1A-212ENST00000539372 UBE2BP63146 152 aa11.62□□□□□ -0.55
TNFRSF1A-212ENST00000539372 LINC00469Q8N7U9 141 aa11.62□□□□□ -0.55
TNFRSF1A-212ENST00000539372 UBR4Q5T4S7 5183 aa11.6□□□□□ -0.55
TNFRSF1A-212ENST00000539372 DIRC1Q969H9 104 aa11.6□□□□□ -0.55
TNFRSF1A-212ENST00000539372 LINC01546A6NGU7 62 aa11.59□□□□□ -0.55
TNFRSF1A-212ENST00000539372 FABP9Q0Z7S8 132 aa11.59□□□□□ -0.55
TNFRSF1A-212ENST00000539372 MRPL18Q9H0U6 180 aaKnown RBP11.59□□□□□ -0.55
TNFRSF1A-212ENST00000539372 FA2HQ7L5A8 372 aa11.58□□□□□ -0.56
TNFRSF1A-212ENST00000539372 XAGE1AQ9HD64 81 aa11.58□□□□□ -0.56
TNFRSF1A-212ENST00000539372 RPS10P5Q9NQ39 176 aa11.58□□□□□ -0.56
TNFRSF1A-212ENST00000539372 TINCRA0A1B0GVN0 87 aa11.57□□□□□ -0.56
TNFRSF1A-212ENST00000539372 F8VRH5 84 aa11.57□□□□□ -0.56
TNFRSF1A-212ENST00000539372 COX19Q49B96 90 aa11.57□□□□□ -0.56
TNFRSF1A-212ENST00000539372 C10orf91Q5T1B1 145 aa11.57□□□□□ -0.56
TNFRSF1A-212ENST00000539372 CST9LQ9H4G1 147 aa11.57□□□□□ -0.56
TNFRSF1A-212ENST00000539372 SMIM1B2RUZ4 78 aa11.56□□□□□ -0.56
TNFRSF1A-212ENST00000539372 RHEBQ15382 184 aa11.56□□□□□ -0.56
TNFRSF1A-212ENST00000539372 SMCO4Q9NRQ5 59 aa11.56□□□□□ -0.56
TNFRSF1A-212ENST00000539372 H0Y9J4 135 aa11.55□□□□□ -0.56
TNFRSF1A-212ENST00000539372 CARHSP1Q9Y2V2 147 aaKnown RBP11.55□□□□□ -0.56
TNFRSF1A-212ENST00000539372 LINC01549A6NIU2 74 aa11.54□□□□□ -0.56
TNFRSF1A-212ENST00000539372 CXCL5P42830 114 aa11.54□□□□□ -0.56
TNFRSF1A-212ENST00000539372 PDZD11Q5EBL8 140 aa11.54□□□□□ -0.56
TNFRSF1A-212ENST00000539372 PRR26Q8N8Z3 221 aa11.54□□□□□ -0.56
TNFRSF1A-212ENST00000539372 COX7B2Q8TF08 81 aa11.54□□□□□ -0.56
TNFRSF1A-212ENST00000539372 C22orf24Q9Y442 160 aa11.54□□□□□ -0.56
TNFRSF1A-212ENST00000539372 IGLV5-45A0A087WSX0 123 aa11.53□□□□□ -0.56
TNFRSF1A-212ENST00000539372 SPINK8P0C7L1 97 aa11.53□□□□□ -0.56
TNFRSF1A-212ENST00000539372 PMVKQ15126 192 aa11.53□□□□□ -0.56
TNFRSF1A-212ENST00000539372 TRAPPC1Q9Y5R8 145 aa11.5□□□□□ -0.57
TNFRSF1A-212ENST00000539372 LRP2P98164 4655 aa11.49□□□□□ -0.57
TNFRSF1A-212ENST00000539372 LBHQ53QV2 105 aaPredicted RBP11.49□□□□□ -0.57
TNFRSF1A-212ENST00000539372 A0A096LNJ9 63 aa11.48□□□□□ -0.57
TNFRSF1A-212ENST00000539372 KRTAP1-4P0C5Y4 121 aa11.48□□□□□ -0.57
TNFRSF1A-212ENST00000539372 NDUFA6P56556 154 aa11.48□□□□□ -0.57
TNFRSF1A-212ENST00000539372 RAB5BP61020 215 aa11.48□□□□□ -0.57
TNFRSF1A-212ENST00000539372 URB1-AS1Q96HZ7 61 aa11.48□□□□□ -0.57
TNFRSF1A-212ENST00000539372 PMCHL1Q16048 86 aa11.47□□□□□ -0.57
TNFRSF1A-212ENST00000539372 MRPL55Q7Z7F7 128 aaKnown RBP11.47□□□□□ -0.57
TNFRSF1A-212ENST00000539372 C18orf32Q8TCD1 76 aa11.47□□□□□ -0.57
TNFRSF1A-212ENST00000539372 H3BRM9 83 aa11.46□□□□□ -0.57
TNFRSF1A-212ENST00000539372 NUPR1O60356 82 aa11.45□□□□□ -0.58
TNFRSF1A-212ENST00000539372 ZNF861PO60384 105 aa11.45□□□□□ -0.58
TNFRSF1A-212ENST00000539372 APOC3P02656 99 aa11.45□□□□□ -0.58
TNFRSF1A-212ENST00000539372 LINC00614P0C842 121 aa11.45□□□□□ -0.58
TNFRSF1A-212ENST00000539372 IGLC3P0DOY3 106 aa11.45□□□□□ -0.58
TNFRSF1A-212ENST00000539372 TP73-AS1Q9UF72 201 aa11.45□□□□□ -0.58
TNFRSF1A-212ENST00000539372 IGLV1-50A0A075B6I6 118 aa11.44□□□□□ -0.58
TNFRSF1A-212ENST00000539372 NDUFA5Q16718 116 aa11.44□□□□□ -0.58
TNFRSF1A-212ENST00000539372 RPL37AP8A6NKH3 93 aa11.43□□□□□ -0.58
TNFRSF1A-212ENST00000539372 ATP5LO75964 103 aa11.43□□□□□ -0.58
TNFRSF1A-212ENST00000539372 HBDP02042 147 aa11.43□□□□□ -0.58
TNFRSF1A-212ENST00000539372 GAGE10A6NGK3 116 aa11.42□□□□□ -0.58
TNFRSF1A-212ENST00000539372 LINC00167Q96N53 147 aa11.42□□□□□ -0.58
TNFRSF1A-212ENST00000539372 ZNF22P17026 224 aaPredicted RBP11.41□□□□□ -0.58
TNFRSF1A-212ENST00000539372 SVBPQ8N300 66 aa11.41□□□□□ -0.58
TNFRSF1A-212ENST00000539372 IGLV5-39A0A0G2JS06 123 aa11.4□□□□□ -0.58
TNFRSF1A-212ENST00000539372 BCE1O60756 84 aa11.4□□□□□ -0.58
TNFRSF1A-212ENST00000539372 SNAPINO95295 136 aa11.4□□□□□ -0.58
TNFRSF1A-212ENST00000539372 PFN2P35080 140 aa11.4□□□□□ -0.58
TNFRSF1A-212ENST00000539372 BAGE3Q86Y29 109 aa11.38□□□□□ -0.59
TNFRSF1A-212ENST00000539372 NKAPP1Q8N9T2 125 aa11.38□□□□□ -0.59
TNFRSF1A-212ENST00000539372 IGLV5-37A0A075B6J1 123 aa11.37□□□□□ -0.59
TNFRSF1A-212ENST00000539372 C11orf86A6NJI1 115 aa11.37□□□□□ -0.59
TNFRSF1A-212ENST00000539372 SCO1O75880 301 aa11.37□□□□□ -0.59
TNFRSF1A-212ENST00000539372 RPL13AP40429 203 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-212ENST00000539372 RPL28P46779 137 aaKnown RBP11.37□□□□□ -0.59
TNFRSF1A-212ENST00000539372 TMEM170BQ5T4T1 132 aa11.35□□□□□ -0.59
TNFRSF1A-212ENST00000539372 ZNF625Q96I27 306 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF1A-212ENST00000539372 ERG28Q9UKR5 140 aa11.34□□□□□ -0.59
TNFRSF1A-212ENST00000539372 SLC7A5P1Q8MH63 180 aa11.33□□□□□ -0.6
TNFRSF1A-212ENST00000539372 YPEL4Q96NS1 127 aa11.33□□□□□ -0.6
TNFRSF1A-212ENST00000539372 SND1-IT1Q9HBX3 110 aa11.33□□□□□ -0.6
TNFRSF1A-212ENST00000539372 IGKV2-28A0A075B6P5 120 aa11.32□□□□□ -0.6
TNFRSF1A-212ENST00000539372 IGKV2D-28P01615 120 aa11.32□□□□□ -0.6
TNFRSF1A-212ENST00000539372 CHTOPQ9Y3Y2 248 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-212ENST00000539372 LPAP08519 4548 aa11.31□□□□□ -0.6
TNFRSF1A-212ENST00000539372 UBE2AP49459 152 aa11.31□□□□□ -0.6
TNFRSF1A-212ENST00000539372 A0A087X002 238 aa11.3□□□□□ -0.6
TNFRSF1A-212ENST00000539372 VPREB1P12018 145 aa11.3□□□□□ -0.6
TNFRSF1A-212ENST00000539372 COX17Q14061 63 aa11.29□□□□□ -0.6
TNFRSF1A-212ENST00000539372 CHCHD1Q96BP2 118 aaKnown RBP11.29□□□□□ -0.6
TNFRSF1A-212ENST00000539372 ANAPC11Q9NYG5 84 aa11.29□□□□□ -0.6
TNFRSF1A-212ENST00000539372 KRTAP13-1Q8IUC0 172 aa11.28□□□□□ -0.6
TNFRSF1A-212ENST00000539372 IFI27L1Q96BM0 104 aa11.28□□□□□ -0.6
TNFRSF1A-212ENST00000539372 CBLN2Q8IUK8 224 aa11.27□□□□□ -0.61
TNFRSF1A-212ENST00000539372 Q8NDZ9 215 aa11.27□□□□□ -0.61
TNFRSF1A-212ENST00000539372 TMEM223A0PJW6 202 aa11.26□□□□□ -0.61
TNFRSF1A-212ENST00000539372 TMEM238C9JI98 176 aa11.26□□□□□ -0.61
TNFRSF1A-212ENST00000539372 TSPAN13O95857 204 aa11.26□□□□□ -0.61
TNFRSF1A-212ENST00000539372 CRYGAP11844 174 aa11.26□□□□□ -0.61
TNFRSF1A-212ENST00000539372 RPL24P83731 157 aaKnown RBP11.26□□□□□ -0.61
TNFRSF1A-212ENST00000539372 PRR4Q16378 134 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms