RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 KLK9Q2XQG4 91 aa-0.15□□□□□ -2.43
CCDC7-209ENST00000539197 VAMP8Q9BV40 100 aa-0.15□□□□□ -2.43
CCDC7-209ENST00000539197 BTAF1O14981 1849 aa-0.15□□□□□ -2.43
CCDC7-209ENST00000539197 NLRP1Q9C000 1473 aa-0.16□□□□□ -2.43
CCDC7-209ENST00000539197 KMT2CQ8NEZ4 4911 aaKnown RBP-0.16□□□□□ -2.43
CCDC7-209ENST00000539197 ZFYVE16Q7Z3T8 1539 aa-0.16□□□□□ -2.43
CCDC7-209ENST00000539197 BSNQ9UPA5 3926 aa-0.16□□□□□ -2.43
CCDC7-209ENST00000539197 DEFB107AQ8IZN7 70 aa-0.16□□□□□ -2.44
CCDC7-209ENST00000539197 PMCHL2Q9BQD1 86 aa-0.16□□□□□ -2.44
CCDC7-209ENST00000539197 CRIPTQ9P021 101 aa-0.16□□□□□ -2.44
CCDC7-209ENST00000539197 DIP2CQ9Y2E4 1556 aa-0.16□□□□□ -2.44
CCDC7-209ENST00000539197 DOPEY2Q9Y3R5 2298 aa-0.16□□□□□ -2.44
CCDC7-209ENST00000539197 MRC2Q9UBG0 1479 aa-0.16□□□□□ -2.44
CCDC7-209ENST00000539197 TOP2BQ02880 1626 aa-0.16□□□□□ -2.44
CCDC7-209ENST00000539197 ALMS1Q8TCU4 4167 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 TRBV25-1A0A075B6N4 114 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 A0A1B0GU69 56 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 SYS1-DBNDD2H3BUS1 97 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 H7BZZ5 65 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 NDUFC1O43677 76 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 MPC2O95563 127 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 RBP2P50120 134 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 PMCHL1Q16048 86 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 PSMG4Q5JS54 123 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 DEFB105AQ8NG35 78 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 TRGV9Q99603 122 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 AP4S1Q9Y587 144 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 PLEKHH2Q8IVE3 1493 aa-0.17□□□□□ -2.44
CCDC7-209ENST00000539197 COL4A6Q14031 1691 aa-0.18□□□□□ -2.44
CCDC7-209ENST00000539197 ANKRD36BQ8N2N9 1353 aa-0.18□□□□□ -2.44
CCDC7-209ENST00000539197 SETBP1Q9Y6X0 1596 aa-0.18□□□□□ -2.44
CCDC7-209ENST00000539197 LOC730098B7Z3J9 87 aa-0.18□□□□□ -2.44
CCDC7-209ENST00000539197 SPINK4O60575 86 aa-0.18□□□□□ -2.44
CCDC7-209ENST00000539197 C6orf201Q7Z4U5 140 aa-0.18□□□□□ -2.44
CCDC7-209ENST00000539197 APLNQ9ULZ1 77 aa-0.18□□□□□ -2.44
CCDC7-209ENST00000539197 SCN7AQ01118 1682 aa-0.18□□□□□ -2.44
CCDC7-209ENST00000539197 ATRQ13535 2644 aa-0.18□□□□□ -2.44
CCDC7-209ENST00000539197 HECTD4Q9Y4D8 3996 aa-0.19□□□□□ -2.44
CCDC7-209ENST00000539197 RYR3Q15413 4870 aa-0.19□□□□□ -2.44
CCDC7-209ENST00000539197 CPSF4LA6NMK7 179 aaKnown RBP-0.19□□□□□ -2.44
CCDC7-209ENST00000539197 H3BQF6 201 aa-0.19□□□□□ -2.44
CCDC7-209ENST00000539197 COX8AP10176 69 aa-0.19□□□□□ -2.44
CCDC7-209ENST00000539197 NCMAPQ5T1S8 102 aa-0.19□□□□□ -2.44
CCDC7-209ENST00000539197 USMG5Q96IX5 58 aa-0.19□□□□□ -2.44
CCDC7-209ENST00000539197 MLH3Q9UHC1 1453 aa-0.2□□□□□ -2.44
CCDC7-209ENST00000539197 H0Y9P7 68 aa-0.2□□□□□ -2.44
CCDC7-209ENST00000539197 ATOX1O00244 68 aa-0.2□□□□□ -2.44
CCDC7-209ENST00000539197 UQCRHP07919 91 aa-0.2□□□□□ -2.44
CCDC7-209ENST00000539197 GNGT1P63211 74 aa-0.2□□□□□ -2.44
CCDC7-209ENST00000539197 ACBD7Q8N6N7 88 aa-0.2□□□□□ -2.44
CCDC7-209ENST00000539197 SERP2Q8N6R1 65 aa-0.2□□□□□ -2.44
CCDC7-209ENST00000539197 PRDM15P57071 1507 aaPredicted RBP-0.2□□□□□ -2.44
CCDC7-209ENST00000539197 CNTLNQ9NXG0 1405 aa-0.21□□□□□ -2.44
CCDC7-209ENST00000539197 CSPG4Q6UVK1 2322 aa-0.21□□□□□ -2.44
CCDC7-209ENST00000539197 COL5A1-AS1Q5SY13 56 aa-0.21□□□□□ -2.44
CCDC7-209ENST00000539197 STAB1Q9NY15 2570 aa-0.21□□□□□ -2.44
CCDC7-209ENST00000539197 DCHS2Q6V1P9 2916 aa-0.21□□□□□ -2.44
CCDC7-209ENST00000539197 FLNAP21333 2647 aaKnown RBP-0.21□□□□□ -2.44
CCDC7-209ENST00000539197 MAP1BP46821 2468 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-209ENST00000539197 KIAA0556O60303 1618 aa-0.22□□□□□ -2.44
CCDC7-209ENST00000539197 ARMS2P0C7Q2 107 aa-0.22□□□□□ -2.44
CCDC7-209ENST00000539197 LINC00032P0C843 101 aa-0.22□□□□□ -2.44
CCDC7-209ENST00000539197 FAUP35544 74 aaKnown RBP-0.22□□□□□ -2.44
CCDC7-209ENST00000539197 DPY30Q9C005 99 aa-0.22□□□□□ -2.44
CCDC7-209ENST00000539197 NRXN1Q9ULB1 1477 aa-0.22□□□□□ -2.45
CCDC7-209ENST00000539197 CHD8Q9HCK8 2581 aa-0.23□□□□□ -2.45
CCDC7-209ENST00000539197 TOPAZ1Q8N9V7 1692 aa-0.23□□□□□ -2.45
CCDC7-209ENST00000539197 PRKDCP78527 4128 aaKnown RBP-0.23□□□□□ -2.45
CCDC7-209ENST00000539197 URB1O60287 2271 aaKnown RBP-0.23□□□□□ -2.45
CCDC7-209ENST00000539197 M0R143 59 aa-0.23□□□□□ -2.45
CCDC7-209ENST00000539197 PSENENQ9NZ42 101 aa-0.23□□□□□ -2.45
CCDC7-209ENST00000539197 SPTA1P02549 2419 aa-0.23□□□□□ -2.45
CCDC7-209ENST00000539197 SLIT1O75093 1534 aa-0.23□□□□□ -2.45
CCDC7-209ENST00000539197 APC2O95996 2303 aa-0.24□□□□□ -2.45
CCDC7-209ENST00000539197 XRN1Q8IZH2 1706 aaKnown RBP-0.24□□□□□ -2.45
CCDC7-209ENST00000539197 EP300Q09472 2414 aaPredicted RBP-0.24□□□□□ -2.45
CCDC7-209ENST00000539197 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.24□□□□□ -2.45
CCDC7-209ENST00000539197 TSC2P49815 1807 aa-0.24□□□□□ -2.45
CCDC7-209ENST00000539197 I3L3M4 83 aa-0.24□□□□□ -2.45
CCDC7-209ENST00000539197 H1FX-AS1Q4G0G2 97 aa-0.24□□□□□ -2.45
CCDC7-209ENST00000539197 SETXQ7Z333 2677 aaKnown RBP-0.24□□□□□ -2.45
CCDC7-209ENST00000539197 UBR4Q5T4S7 5183 aa-0.24□□□□□ -2.45
CCDC7-209ENST00000539197 UQCRHLA0A096LP55 91 aa-0.25□□□□□ -2.45
CCDC7-209ENST00000539197 M0R2T5 61 aa-0.25□□□□□ -2.45
CCDC7-209ENST00000539197 KRTAP6-1Q3LI64 71 aa-0.25□□□□□ -2.45
CCDC7-209ENST00000539197 ETDBQ3ZM63 59 aa-0.25□□□□□ -2.45
CCDC7-209ENST00000539197 NKTRP30414 1462 aaKnown RBP-0.25□□□□□ -2.45
CCDC7-209ENST00000539197 TEX14Q8IWB6 1497 aa-0.25□□□□□ -2.45
CCDC7-209ENST00000539197 PEG3Q9GZU2 1588 aa-0.25□□□□□ -2.45
CCDC7-209ENST00000539197 A0A0G2JMZ2 1700 aa-0.25□□□□□ -2.45
CCDC7-209ENST00000539197 CHD1O14646 1710 aa-0.25□□□□□ -2.45
CCDC7-209ENST00000539197 RYR2Q92736 4967 aa-0.25□□□□□ -2.45
CCDC7-209ENST00000539197 TCHHQ07283 1943 aa-0.26□□□□□ -2.45
CCDC7-209ENST00000539197 RNF213Q63HN8 5207 aa-0.26□□□□□ -2.45
CCDC7-209ENST00000539197 RAPGEF2Q9Y4G8 1499 aa-0.26□□□□□ -2.45
CCDC7-209ENST00000539197 EDC4Q6P2E9 1401 aaKnown RBP-0.26□□□□□ -2.45
CCDC7-209ENST00000539197 TRBV7-7A0A0K0K1E9 115 aa-0.26□□□□□ -2.45
CCDC7-209ENST00000539197 D6R8Y8 96 aa-0.26□□□□□ -2.45
CCDC7-209ENST00000539197 F8WEM9 126 aa-0.26□□□□□ -2.45
CCDC7-209ENST00000539197 IGLC2P0DOY2 106 aa-0.26□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 218.9 ms