RNA–Protein interactions for RNA: ENST00000538744.5

DDX55-205, Transcript of DEAD-box helicase 55, humanhuman

TSL 5 BASIC

Gene DDX55, Length 1,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-205ENST00000538744 WFDC10BQ8IUB3 73 aa13.87□□□□□ -0.19
DDX55-205ENST00000538744 IBA57-AS1B1ANH7 110 aa13.87□□□□□ -0.19
DDX55-205ENST00000538744 MALP21145 153 aa13.87□□□□□ -0.19
DDX55-205ENST00000538744 FOXI1Q12951 378 aa13.87□□□□□ -0.19
DDX55-205ENST00000538744 NBEAL1Q6ZS30 2694 aa13.86□□□□□ -0.19
DDX55-205ENST00000538744 H7C2G1 150 aa13.86□□□□□ -0.19
DDX55-205ENST00000538744 Q1RN00 199 aa13.86□□□□□ -0.19
DDX55-205ENST00000538744 ESRGQ1W209 222 aa13.86□□□□□ -0.19
DDX55-205ENST00000538744 SOSTDC1Q6X4U4 206 aa13.86□□□□□ -0.19
DDX55-205ENST00000538744 CRPP02741 224 aa13.85□□□□□ -0.19
DDX55-205ENST00000538744 ENHOQ6UWT2 76 aa13.85□□□□□ -0.19
DDX55-205ENST00000538744 GAGE12HA6NDE8 117 aa13.84□□□□□ -0.19
DDX55-205ENST00000538744 H3BMG7 143 aa13.84□□□□□ -0.19
DDX55-205ENST00000538744 PSMB2P49721 201 aa13.84□□□□□ -0.19
DDX55-205ENST00000538744 LINC00158P58513 81 aa13.84□□□□□ -0.19
DDX55-205ENST00000538744 TRAV8-4A0A0B4J246 113 aa13.83□□□□□ -0.2
DDX55-205ENST00000538744 CFAP161Q6P656 301 aa13.83□□□□□ -0.2
DDX55-205ENST00000538744 MIR7-3HGQ8N6C7 128 aa13.83□□□□□ -0.2
DDX55-205ENST00000538744 SCGB1C2P0DMR2 95 aa13.82□□□□□ -0.2
DDX55-205ENST00000538744 CXCL5P42830 114 aa13.82□□□□□ -0.2
DDX55-205ENST00000538744 CKS1BP61024 79 aa13.82□□□□□ -0.2
DDX55-205ENST00000538744 KIAA0087Q14695 138 aa13.82□□□□□ -0.2
DDX55-205ENST00000538744 UBE2WQ96B02 151 aa13.82□□□□□ -0.2
DDX55-205ENST00000538744 TRBV20-1A0A075B6N2 111 aa13.81□□□□□ -0.2
DDX55-205ENST00000538744 C15orf53Q8NAA6 179 aa13.81□□□□□ -0.2
DDX55-205ENST00000538744 RPL13AP40429 203 aaKnown RBP13.8□□□□□ -0.2
DDX55-205ENST00000538744 C2orf82Q6UX34 121 aa13.8□□□□□ -0.2
DDX55-205ENST00000538744 KLK5Q9Y337 293 aaPredicted RBP13.8□□□□□ -0.2
DDX55-205ENST00000538744 TRBV30A0A0K0K1B3 111 aa13.79□□□□□ -0.2
DDX55-205ENST00000538744 F8W1H4 67 aa13.79□□□□□ -0.2
DDX55-205ENST00000538744 PFN2P35080 140 aa13.79□□□□□ -0.2
DDX55-205ENST00000538744 TCL1BO95988 128 aa13.78□□□□□ -0.2
DDX55-205ENST00000538744 MGAM2Q2M2H8 2515 aa13.78□□□□□ -0.2
DDX55-205ENST00000538744 LINC01556Q5JQF7 62 aa13.77□□□□□ -0.21
DDX55-205ENST00000538744 TRIAP1O43715 76 aa13.76□□□□□ -0.21
DDX55-205ENST00000538744 SPAG11BQ08648 103 aa13.76□□□□□ -0.21
DDX55-205ENST00000538744 SND1-IT1Q9HBX3 110 aa13.75□□□□□ -0.21
DDX55-205ENST00000538744 PRO0461Q9UI25 63 aa13.75□□□□□ -0.21
DDX55-205ENST00000538744 CCL18P55774 89 aa13.74□□□□□ -0.21
DDX55-205ENST00000538744 COX6CP09669 75 aa13.73□□□□□ -0.21
DDX55-205ENST00000538744 COX17Q14061 63 aa13.73□□□□□ -0.21
DDX55-205ENST00000538744 WFDC2Q14508 124 aa13.72□□□□□ -0.21
DDX55-205ENST00000538744 OCIAD2Q56VL3 154 aa13.72□□□□□ -0.21
DDX55-205ENST00000538744 DNAH10OSP0CZ25 163 aa13.71□□□□□ -0.21
DDX55-205ENST00000538744 MTURNQ8N3F0 131 aa13.71□□□□□ -0.21
DDX55-205ENST00000538744 TRAV13-2A0A0B4J235 113 aa13.7□□□□□ -0.22
DDX55-205ENST00000538744 B9D2Q9BPU9 175 aa13.7□□□□□ -0.22
DDX55-205ENST00000538744 ATXN8Q156A1 80 aa13.7□□□□□ -0.22
DDX55-205ENST00000538744 KRTAP26-1Q6PEX3 210 aa13.7□□□□□ -0.22
DDX55-205ENST00000538744 C6orf223Q8N319 242 aa13.69□□□□□ -0.22
DDX55-205ENST00000538744 LINC00588Q9Y4M8 146 aa13.69□□□□□ -0.22
DDX55-205ENST00000538744 C1orf43Q9BWL3 253 aa13.68□□□□□ -0.22
DDX55-205ENST00000538744 IGKV2-28A0A075B6P5 120 aa13.67□□□□□ -0.22
DDX55-205ENST00000538744 IGKV2D-28P01615 120 aa13.67□□□□□ -0.22
DDX55-205ENST00000538744 K7ERU9 68 aa13.67□□□□□ -0.22
DDX55-205ENST00000538744 UNQ6190/PRO20217Q6UXQ8 127 aa13.67□□□□□ -0.22
DDX55-205ENST00000538744 C9orf116Q5BN46 136 aaPredicted RBP13.66□□□□□ -0.22
DDX55-205ENST00000538744 LINC00337Q8N6G1 96 aa13.66□□□□□ -0.22
DDX55-205ENST00000538744 LINC00526Q96FQ7 95 aa13.66□□□□□ -0.22
DDX55-205ENST00000538744 HUWE1Q7Z6Z7 4374 aaKnown RBP13.65□□□□□ -0.22
DDX55-205ENST00000538744 C10orf25Q5T742 122 aa13.65□□□□□ -0.22
DDX55-205ENST00000538744 MUC7Q8TAX7 377 aa13.65□□□□□ -0.22
DDX55-205ENST00000538744 NTN5Q8WTR8 489 aaPredicted RBP13.65□□□□□ -0.22
DDX55-205ENST00000538744 SMCPP49901 116 aaPredicted RBP13.64□□□□□ -0.23
DDX55-205ENST00000538744 IGKV2D-24A0A075B6R9 120 aa13.63□□□□□ -0.23
DDX55-205ENST00000538744 GVQW2A0A096LPI5 108 aaPredicted RBP13.63□□□□□ -0.23
DDX55-205ENST00000538744 ETDBQ3ZM63 59 aa13.63□□□□□ -0.23
DDX55-205ENST00000538744 LINC01620Q4KN68 170 aa13.63□□□□□ -0.23
DDX55-205ENST00000538744 C9JAW5 83 aa13.62□□□□□ -0.23
DDX55-205ENST00000538744 ZNF561-AS1K7EIQ3 104 aa13.62□□□□□ -0.23
DDX55-205ENST00000538744 CLEC2BQ92478 149 aa13.61□□□□□ -0.23
DDX55-205ENST00000538744 LST1O00453 97 aa13.61□□□□□ -0.23
DDX55-205ENST00000538744 UPK3BQ9BT76 320 aa13.61□□□□□ -0.23
DDX55-205ENST00000538744 HIGD2BQ4VC39 106 aa13.6□□□□□ -0.23
DDX55-205ENST00000538744 C15orf56Q8N910 161 aa13.6□□□□□ -0.23
DDX55-205ENST00000538744 SLC25A20O43772 301 aa13.59□□□□□ -0.23
DDX55-205ENST00000538744 NDUFC2O95298 119 aa13.59□□□□□ -0.23
DDX55-205ENST00000538744 RPL28P46779 137 aaKnown RBP13.59□□□□□ -0.23
DDX55-205ENST00000538744 Q9HAA7 133 aa13.59□□□□□ -0.23
DDX55-205ENST00000538744 M0QXV9 152 aa13.59□□□□□ -0.23
DDX55-205ENST00000538744 C6orf48Q9UBA6 75 aa13.59□□□□□ -0.23
DDX55-205ENST00000538744 CAMK2N2Q96S95 79 aa13.58□□□□□ -0.24
DDX55-205ENST00000538744 C2orf48Q96LS8 159 aa13.57□□□□□ -0.24
DDX55-205ENST00000538744 NHLRC4P0CG21 123 aaPredicted RBP13.56□□□□□ -0.24
DDX55-205ENST00000538744 OR13C6PQ8NH95 151 aa13.56□□□□□ -0.24
DDX55-205ENST00000538744 TRBV10-2A0A0K0K1G8 114 aa13.56□□□□□ -0.24
DDX55-205ENST00000538744 SMIM11BQ8TCY0 68 aa13.56□□□□□ -0.24
DDX55-205ENST00000538744 F8WDY8 70 aa13.55□□□□□ -0.24
DDX55-205ENST00000538744 TEN1Q86WV5 123 aa13.55□□□□□ -0.24
DDX55-205ENST00000538744 RNF151Q2KHN1 245 aa13.54□□□□□ -0.24
DDX55-205ENST00000538744 ANKRD29Q8N6D5 301 aa13.54□□□□□ -0.24
DDX55-205ENST00000538744 RMI2Q96E14 147 aa13.53□□□□□ -0.24
DDX55-205ENST00000538744 LINC01600Q96MT4 127 aa13.53□□□□□ -0.24
DDX55-205ENST00000538744 COL7A1Q02388 2944 aa13.52□□□□□ -0.25
DDX55-205ENST00000538744 J3QR89 54 aa13.52□□□□□ -0.25
DDX55-205ENST00000538744 Q6ZRU5 148 aa13.51□□□□□ -0.25
DDX55-205ENST00000538744 PRR3P79522 188 aaKnown RBP13.5□□□□□ -0.25
DDX55-205ENST00000538744 APLNQ9ULZ1 77 aa13.5□□□□□ -0.25
DDX55-205ENST00000538744 H3BT86 120 aa13.5□□□□□ -0.25
DDX55-205ENST00000538744 TRACP01848 142 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms