RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 CKS1BP61024 79 aa6.08□□□□□ -1.44
UBE3B-208ENST00000538070 C9orf116Q5BN46 136 aaPredicted RBP6.08□□□□□ -1.44
UBE3B-208ENST00000538070 SS18L2Q9UHA2 77 aa6.08□□□□□ -1.44
UBE3B-208ENST00000538070 PRB2P02812 416 aaPredicted RBP6.07□□□□□ -1.44
UBE3B-208ENST00000538070 IFITM1P13164 125 aa6.07□□□□□ -1.44
UBE3B-208ENST00000538070 XGP55808 180 aa6.07□□□□□ -1.44
UBE3B-208ENST00000538070 UBE2WQ96B02 151 aa6.07□□□□□ -1.44
UBE3B-208ENST00000538070 TRBV30A0A0K0K1B3 111 aa6.07□□□□□ -1.44
UBE3B-208ENST00000538070 H7C423 109 aa6.07□□□□□ -1.44
UBE3B-208ENST00000538070 IGLV5-45A0A087WSX0 123 aa6.07□□□□□ -1.44
UBE3B-208ENST00000538070 TRAV8-4A0A0B4J246 113 aa6.06□□□□□ -1.44
UBE3B-208ENST00000538070 KLK12Q9UKR0 248 aa6.06□□□□□ -1.44
UBE3B-208ENST00000538070 TENM3Q9P273 2699 aa6.06□□□□□ -1.44
UBE3B-208ENST00000538070 TRBV10-2A0A0K0K1G8 114 aa6.06□□□□□ -1.44
UBE3B-208ENST00000538070 IGHV4-30-4P0DP06 118 aa6.06□□□□□ -1.44
UBE3B-208ENST00000538070 APOC4P55056 127 aa6.06□□□□□ -1.44
UBE3B-208ENST00000538070 CSDC2Q9Y534 153 aaKnown RBP6.06□□□□□ -1.44
UBE3B-208ENST00000538070 TTC32Q5I0X7 151 aa6.06□□□□□ -1.44
UBE3B-208ENST00000538070 SMIM20Q8N5G0 67 aa6.06□□□□□ -1.44
UBE3B-208ENST00000538070 CDIP1Q9H305 208 aa6.06□□□□□ -1.44
UBE3B-208ENST00000538070 IGHV3OR16-9A0A0B4J2B5 98 aa6.05□□□□□ -1.44
UBE3B-208ENST00000538070 SLPIP03973 132 aa6.05□□□□□ -1.44
UBE3B-208ENST00000538070 CCL18P55774 89 aa6.04□□□□□ -1.44
UBE3B-208ENST00000538070 MRPL23Q16540 153 aaKnown RBP6.04□□□□□ -1.44
UBE3B-208ENST00000538070 DNAL4O96015 105 aa6.04□□□□□ -1.44
UBE3B-208ENST00000538070 CHCHD10Q8WYQ3 142 aaPredicted RBP6.04□□□□□ -1.44
UBE3B-208ENST00000538070 M0QXV9 152 aa6.04□□□□□ -1.44
UBE3B-208ENST00000538070 LINC00337Q8N6G1 96 aa6.04□□□□□ -1.44
UBE3B-208ENST00000538070 KIR2DL5BQ8NHK3 375 aa6.04□□□□□ -1.44
UBE3B-208ENST00000538070 COPS9Q8WXC6 57 aa6.04□□□□□ -1.44
UBE3B-208ENST00000538070 SPATA25Q9BR10 227 aa6.04□□□□□ -1.44
UBE3B-208ENST00000538070 LST1O00453 97 aa6.03□□□□□ -1.44
UBE3B-208ENST00000538070 TIMM17BO60830 172 aa6.03□□□□□ -1.44
UBE3B-208ENST00000538070 SNCGO76070 127 aa6.03□□□□□ -1.44
UBE3B-208ENST00000538070 BAALC-AS2P0C853 105 aa6.03□□□□□ -1.44
UBE3B-208ENST00000538070 REG3AQ06141 175 aa6.03□□□□□ -1.44
UBE3B-208ENST00000538070 SPART-AS1P0CW21 52 aa6.03□□□□□ -1.44
UBE3B-208ENST00000538070 C6orf223Q8N319 242 aa6.03□□□□□ -1.44
UBE3B-208ENST00000538070 C3orf56Q8N813 242 aa6.03□□□□□ -1.44
UBE3B-208ENST00000538070 FAM218AQ96MZ4 157 aa6.03□□□□□ -1.44
UBE3B-208ENST00000538070 COX7A2LO14548 114 aa6.02□□□□□ -1.45
UBE3B-208ENST00000538070 MRAPQ8TCY5 172 aa6.02□□□□□ -1.45
UBE3B-208ENST00000538070 A0A087WZ39 114 aa6.02□□□□□ -1.45
UBE3B-208ENST00000538070 C15orf53Q8NAA6 179 aa6.02□□□□□ -1.45
UBE3B-208ENST00000538070 NCR3O14931 201 aa6.02□□□□□ -1.45
UBE3B-208ENST00000538070 SMIM11BQ8TCY0 68 aa6.02□□□□□ -1.45
UBE3B-208ENST00000538070 LYRM9A8MSI8 78 aa6.01□□□□□ -1.45
UBE3B-208ENST00000538070 LECT2O14960 151 aa6.01□□□□□ -1.45
UBE3B-208ENST00000538070 TRAV13-2A0A0B4J235 113 aa6.01□□□□□ -1.45
UBE3B-208ENST00000538070 SMIM9A6NGZ8 99 aa6.01□□□□□ -1.45
UBE3B-208ENST00000538070 GAGE2AQ6NT46 116 aa6.01□□□□□ -1.45
UBE3B-208ENST00000538070 IGKV2-28A0A075B6P5 120 aa6□□□□□ -1.45
UBE3B-208ENST00000538070 IGKV2D-28P01615 120 aa6□□□□□ -1.45
UBE3B-208ENST00000538070 HIGD2BQ4VC39 106 aa6□□□□□ -1.45
UBE3B-208ENST00000538070 A0A087WYN8 130 aa6□□□□□ -1.45
UBE3B-208ENST00000538070 GAGE2BQ13066 116 aa6□□□□□ -1.45
UBE3B-208ENST00000538070 GAGE2EQ4V326 116 aa6□□□□□ -1.45
UBE3B-208ENST00000538070 UNQ6190/PRO20217Q6UXQ8 127 aa6□□□□□ -1.45
UBE3B-208ENST00000538070 GAGE2DQ9UEU5 116 aa6□□□□□ -1.45
UBE3B-208ENST00000538070 CYSRT1A8MQ03 144 aa5.99□□□□□ -1.45
UBE3B-208ENST00000538070 DEFB121Q5J5C9 76 aa5.99□□□□□ -1.45
UBE3B-208ENST00000538070 XAGE1AQ9HD64 81 aa5.99□□□□□ -1.45
UBE3B-208ENST00000538070 S100A7L2Q5SY68 101 aa5.98□□□□□ -1.45
UBE3B-208ENST00000538070 Q8NAQ8 132 aa5.98□□□□□ -1.45
UBE3B-208ENST00000538070 IBA57-AS1B1ANH7 110 aa5.98□□□□□ -1.45
UBE3B-208ENST00000538070 H3BT86 120 aa5.98□□□□□ -1.45
UBE3B-208ENST00000538070 SPAG11BQ08648 103 aa5.98□□□□□ -1.45
UBE3B-208ENST00000538070 C10orf25Q5T742 122 aa5.98□□□□□ -1.45
UBE3B-208ENST00000538070 Q6ZTC4 211 aa5.98□□□□□ -1.45
UBE3B-208ENST00000538070 ANAPC13Q9BS18 74 aa5.98□□□□□ -1.45
UBE3B-208ENST00000538070 MIFP14174 115 aa5.97□□□□□ -1.45
UBE3B-208ENST00000538070 NANOS2P60321 138 aaKnown RBP5.97□□□□□ -1.45
UBE3B-208ENST00000538070 C14orf132Q9NPU4 83 aa5.97□□□□□ -1.45
UBE3B-208ENST00000538070 CD164L2Q6UWJ8 174 aa5.97□□□□□ -1.45
UBE3B-208ENST00000538070 WFDC10BQ8IUB3 73 aa5.97□□□□□ -1.45
UBE3B-208ENST00000538070 KRTAP10-11P60412 298 aa5.96□□□□□ -1.46
UBE3B-208ENST00000538070 RNF183Q96D59 192 aa5.96□□□□□ -1.46
UBE3B-208ENST00000538070 A0A1B0GUV1 79 aa5.96□□□□□ -1.46
UBE3B-208ENST00000538070 KPRPQ5T749 579 aaPredicted RBP5.96□□□□□ -1.46
UBE3B-208ENST00000538070 FAM19A3Q7Z5A8 133 aa5.96□□□□□ -1.46
UBE3B-208ENST00000538070 RPL18AQ02543 176 aaKnown RBP5.95□□□□□ -1.46
UBE3B-208ENST00000538070 KRTAP24-1Q3LI83 254 aa5.95□□□□□ -1.46
UBE3B-208ENST00000538070 LINC00612Q8N6U2 182 aa5.95□□□□□ -1.46
UBE3B-208ENST00000538070 A0A0J9YWU9 116 aa5.95□□□□□ -1.46
UBE3B-208ENST00000538070 C9orf129Q5T035 196 aaKnown RBP5.95□□□□□ -1.46
UBE3B-208ENST00000538070 Q8IZM0 81 aa5.94□□□□□ -1.46
UBE3B-208ENST00000538070 IGKV2D-24A0A075B6R9 120 aa5.94□□□□□ -1.46
UBE3B-208ENST00000538070 ZNF561-AS1K7EIQ3 104 aa5.93□□□□□ -1.46
UBE3B-208ENST00000538070 C6orf99Q4VX62 202 aa5.93□□□□□ -1.46
UBE3B-208ENST00000538070 LELP1Q5T871 98 aa5.93□□□□□ -1.46
UBE3B-208ENST00000538070 LYPD5Q6UWN5 251 aa5.93□□□□□ -1.46
UBE3B-208ENST00000538070 RPL28P46779 137 aaKnown RBP5.93□□□□□ -1.46
UBE3B-208ENST00000538070 STAB2Q8WWQ8 2551 aa5.92□□□□□ -1.46
UBE3B-208ENST00000538070 TRACP01848 142 aa5.92□□□□□ -1.46
UBE3B-208ENST00000538070 IGKV3D-7A0A0C4DH55 119 aa5.92□□□□□ -1.46
UBE3B-208ENST00000538070 CAMK2N2Q96S95 79 aa5.92□□□□□ -1.46
UBE3B-208ENST00000538070 DEFB131BA0A096LNP1 70 aa5.91□□□□□ -1.46
UBE3B-208ENST00000538070 KIAA0087Q14695 138 aa5.91□□□□□ -1.46
UBE3B-208ENST00000538070 ENHOQ6UWT2 76 aa5.91□□□□□ -1.46
UBE3B-208ENST00000538070 SCGB1A1P11684 91 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms