RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ALKBH7Q9BT30 221 aaPredicted RBP8.73□□□□□ -1.01
RTN3P1-201ENST00000536295 SEC11CQ9BY50 192 aa8.73□□□□□ -1.01
RTN3P1-201ENST00000536295 CDKN2A-AS1Q9UH64 79 aa8.73□□□□□ -1.01
RTN3P1-201ENST00000536295 SEC11AP67812 179 aa8.72□□□□□ -1.01
RTN3P1-201ENST00000536295 COMMD7Q86VX2 200 aa8.72□□□□□ -1.01
RTN3P1-201ENST00000536295 Q8IZM0 81 aa8.72□□□□□ -1.01
RTN3P1-201ENST00000536295 LINC00469Q8N7U9 141 aa8.72□□□□□ -1.01
RTN3P1-201ENST00000536295 ERASQ7Z444 233 aa8.71□□□□□ -1.02
RTN3P1-201ENST00000536295 GNB1LQ9BYB4 327 aa8.71□□□□□ -1.02
RTN3P1-201ENST00000536295 DIRC1Q969H9 104 aa8.7□□□□□ -1.02
RTN3P1-201ENST00000536295 XAGE1AQ9HD64 81 aa8.69□□□□□ -1.02
RTN3P1-201ENST00000536295 F8VRH5 84 aa8.68□□□□□ -1.02
RTN3P1-201ENST00000536295 FABP9Q0Z7S8 132 aa8.68□□□□□ -1.02
RTN3P1-201ENST00000536295 FA2HQ7L5A8 372 aa8.68□□□□□ -1.02
RTN3P1-201ENST00000536295 MRPL18Q9H0U6 180 aaKnown RBP8.68□□□□□ -1.02
RTN3P1-201ENST00000536295 RPS10P5Q9NQ39 176 aa8.68□□□□□ -1.02
RTN3P1-201ENST00000536295 SMIM1B2RUZ4 78 aa8.67□□□□□ -1.02
RTN3P1-201ENST00000536295 H0Y9J4 135 aa8.67□□□□□ -1.02
RTN3P1-201ENST00000536295 SMCO4Q9NRQ5 59 aa8.67□□□□□ -1.02
RTN3P1-201ENST00000536295 LRP2P98164 4655 aa8.66□□□□□ -1.02
RTN3P1-201ENST00000536295 TINCRA0A1B0GVN0 87 aa8.66□□□□□ -1.02
RTN3P1-201ENST00000536295 LINC01546A6NGU7 62 aa8.66□□□□□ -1.02
RTN3P1-201ENST00000536295 COX19Q49B96 90 aa8.66□□□□□ -1.02
RTN3P1-201ENST00000536295 PRR26Q8N8Z3 221 aa8.66□□□□□ -1.02
RTN3P1-201ENST00000536295 CST9LQ9H4G1 147 aa8.66□□□□□ -1.02
RTN3P1-201ENST00000536295 LINC01549A6NIU2 74 aa8.65□□□□□ -1.02
RTN3P1-201ENST00000536295 SPINK8P0C7L1 97 aa8.65□□□□□ -1.02
RTN3P1-201ENST00000536295 CXCL5P42830 114 aa8.65□□□□□ -1.02
RTN3P1-201ENST00000536295 RHEBQ15382 184 aa8.65□□□□□ -1.02
RTN3P1-201ENST00000536295 COX7B2Q8TF08 81 aa8.65□□□□□ -1.02
RTN3P1-201ENST00000536295 C22orf24Q9Y442 160 aa8.65□□□□□ -1.02
RTN3P1-201ENST00000536295 PMVKQ15126 192 aa8.64□□□□□ -1.03
RTN3P1-201ENST00000536295 PDZD11Q5EBL8 140 aa8.64□□□□□ -1.03
RTN3P1-201ENST00000536295 C10orf91Q5T1B1 145 aa8.64□□□□□ -1.03
RTN3P1-201ENST00000536295 LCE2DQ5TA82 110 aaPredicted RBP8.64□□□□□ -1.03
RTN3P1-201ENST00000536295 CARHSP1Q9Y2V2 147 aaKnown RBP8.64□□□□□ -1.03
RTN3P1-201ENST00000536295 IGLV5-45A0A087WSX0 123 aa8.63□□□□□ -1.03
RTN3P1-201ENST00000536295 NDUFA6P56556 154 aa8.62□□□□□ -1.03
RTN3P1-201ENST00000536295 RAB5BP61020 215 aa8.62□□□□□ -1.03
RTN3P1-201ENST00000536295 LBHQ53QV2 105 aaPredicted RBP8.62□□□□□ -1.03
RTN3P1-201ENST00000536295 TRAPPC1Q9Y5R8 145 aa8.61□□□□□ -1.03
RTN3P1-201ENST00000536295 RNF213Q63HN8 5207 aa8.61□□□□□ -1.03
RTN3P1-201ENST00000536295 KRTAP1-4P0C5Y4 121 aa8.6□□□□□ -1.03
RTN3P1-201ENST00000536295 MRPL55Q7Z7F7 128 aaKnown RBP8.6□□□□□ -1.03
RTN3P1-201ENST00000536295 H3BRM9 83 aa8.59□□□□□ -1.03
RTN3P1-201ENST00000536295 NUPR1O60356 82 aa8.59□□□□□ -1.03
RTN3P1-201ENST00000536295 PMCHL1Q16048 86 aa8.59□□□□□ -1.03
RTN3P1-201ENST00000536295 IGLV1-50A0A075B6I6 118 aa8.58□□□□□ -1.04
RTN3P1-201ENST00000536295 A0A096LNJ9 63 aa8.58□□□□□ -1.04
RTN3P1-201ENST00000536295 GAGE10A6NGK3 116 aa8.58□□□□□ -1.04
RTN3P1-201ENST00000536295 RPL37AP8A6NKH3 93 aa8.58□□□□□ -1.04
RTN3P1-201ENST00000536295 ZNF861PO60384 105 aa8.58□□□□□ -1.04
RTN3P1-201ENST00000536295 APOC3P02656 99 aa8.58□□□□□ -1.04
RTN3P1-201ENST00000536295 C18orf32Q8TCD1 76 aa8.58□□□□□ -1.04
RTN3P1-201ENST00000536295 URB1-AS1Q96HZ7 61 aa8.58□□□□□ -1.04
RTN3P1-201ENST00000536295 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
RTN3P1-201ENST00000536295 ATP5LO75964 103 aa8.57□□□□□ -1.04
RTN3P1-201ENST00000536295 LINC00614P0C842 121 aa8.57□□□□□ -1.04
RTN3P1-201ENST00000536295 IGLC3P0DOY3 106 aa8.57□□□□□ -1.04
RTN3P1-201ENST00000536295 HBDP02042 147 aa8.56□□□□□ -1.04
RTN3P1-201ENST00000536295 PFN2P35080 140 aa8.56□□□□□ -1.04
RTN3P1-201ENST00000536295 LINC00167Q96N53 147 aa8.56□□□□□ -1.04
RTN3P1-201ENST00000536295 ZNF22P17026 224 aaPredicted RBP8.55□□□□□ -1.04
RTN3P1-201ENST00000536295 BCE1O60756 84 aa8.54□□□□□ -1.04
RTN3P1-201ENST00000536295 SNAPINO95295 136 aa8.54□□□□□ -1.04
RTN3P1-201ENST00000536295 NDUFA5Q16718 116 aa8.54□□□□□ -1.04
RTN3P1-201ENST00000536295 NKAPP1Q8N9T2 125 aa8.54□□□□□ -1.04
RTN3P1-201ENST00000536295 IGLV5-39A0A0G2JS06 123 aa8.53□□□□□ -1.04
RTN3P1-201ENST00000536295 RPL13AP40429 203 aaKnown RBP8.53□□□□□ -1.04
RTN3P1-201ENST00000536295 RPL28P46779 137 aaKnown RBP8.53□□□□□ -1.04
RTN3P1-201ENST00000536295 BAGE3Q86Y29 109 aa8.53□□□□□ -1.04
RTN3P1-201ENST00000536295 SVBPQ8N300 66 aa8.53□□□□□ -1.04
RTN3P1-201ENST00000536295 SCO1O75880 301 aa8.52□□□□□ -1.05
RTN3P1-201ENST00000536295 TMEM170BQ5T4T1 132 aa8.52□□□□□ -1.05
RTN3P1-201ENST00000536295 ZNF625Q96I27 306 aaPredicted RBP8.52□□□□□ -1.05
RTN3P1-201ENST00000536295 IGLV5-37A0A075B6J1 123 aa8.51□□□□□ -1.05
RTN3P1-201ENST00000536295 C11orf86A6NJI1 115 aa8.51□□□□□ -1.05
RTN3P1-201ENST00000536295 ERG28Q9UKR5 140 aa8.51□□□□□ -1.05
RTN3P1-201ENST00000536295 IGKV2-28A0A075B6P5 120 aa8.5□□□□□ -1.05
RTN3P1-201ENST00000536295 IGKV2D-28P01615 120 aa8.5□□□□□ -1.05
RTN3P1-201ENST00000536295 LPAP08519 4548 aa8.5□□□□□ -1.05
RTN3P1-201ENST00000536295 UBE2AP49459 152 aa8.49□□□□□ -1.05
RTN3P1-201ENST00000536295 SND1-IT1Q9HBX3 110 aa8.49□□□□□ -1.05
RTN3P1-201ENST00000536295 CHTOPQ9Y3Y2 248 aaKnown RBP8.49□□□□□ -1.05
RTN3P1-201ENST00000536295 A0A087X002 238 aa8.47□□□□□ -1.05
RTN3P1-201ENST00000536295 YPEL4Q96NS1 127 aa8.47□□□□□ -1.05
RTN3P1-201ENST00000536295 ANAPC11Q9NYG5 84 aa8.47□□□□□ -1.05
RTN3P1-201ENST00000536295 TSPAN13O95857 204 aa8.46□□□□□ -1.06
RTN3P1-201ENST00000536295 VPREB1P12018 145 aa8.46□□□□□ -1.06
RTN3P1-201ENST00000536295 COX17Q14061 63 aa8.46□□□□□ -1.06
RTN3P1-201ENST00000536295 PRR4Q16378 134 aa8.46□□□□□ -1.06
RTN3P1-201ENST00000536295 CRYGAP11844 174 aa8.45□□□□□ -1.06
RTN3P1-201ENST00000536295 RPL24P83731 157 aaKnown RBP8.45□□□□□ -1.06
RTN3P1-201ENST00000536295 KRTAP13-1Q8IUC0 172 aa8.45□□□□□ -1.06
RTN3P1-201ENST00000536295 CHCHD1Q96BP2 118 aaKnown RBP8.45□□□□□ -1.06
RTN3P1-201ENST00000536295 A0A0U1RRA0 63 aa8.44□□□□□ -1.06
RTN3P1-201ENST00000536295 TMEM238C9JI98 176 aa8.44□□□□□ -1.06
RTN3P1-201ENST00000536295 LINC00158P58513 81 aa8.44□□□□□ -1.06
RTN3P1-201ENST00000536295 PRLHP81277 87 aa8.44□□□□□ -1.06
RTN3P1-201ENST00000536295 SFTA2Q6UW10 78 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms