RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 MALP21145 153 aa5.57□□□□□ -1.52
COL21A1-212ENST00000535941 TSPEAR-AS2P59090 65 aa5.57□□□□□ -1.52
COL21A1-212ENST00000535941 LINC00643Q86TS7 51 aa5.57□□□□□ -1.52
COL21A1-212ENST00000535941 F8P00451 2351 aa5.57□□□□□ -1.52
COL21A1-212ENST00000535941 NOTCH2Q04721 2471 aa5.57□□□□□ -1.52
COL21A1-212ENST00000535941 IGHV4-28A0A0C4DH34 117 aa5.57□□□□□ -1.52
COL21A1-212ENST00000535941 TRBV30A0A0K0K1B3 111 aa5.57□□□□□ -1.52
COL21A1-212ENST00000535941 ICOSQ9Y6W8 199 aa5.57□□□□□ -1.52
COL21A1-212ENST00000535941 TMEM223A0PJW6 202 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 HTN1P15515 57 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 PFN2P35080 140 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 BRK1Q8WUW1 75 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 ATOX1O00244 68 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 DPH3Q96FX2 82 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 CELA1Q9UNI1 258 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 CSMD3Q7Z407 3707 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 WNK1Q9H4A3 2382 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 A0A0U1RRA0 63 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 CRYGAP11844 174 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 TMEM258P61165 79 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 Q5XG85 94 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 VSIG2Q96IQ7 327 aa5.56□□□□□ -1.52
COL21A1-212ENST00000535941 IGHV3OR16-12A0A075B7B8 117 aa5.55□□□□□ -1.52
COL21A1-212ENST00000535941 H3BNG1 76 aa5.55□□□□□ -1.52
COL21A1-212ENST00000535941 TIRAPP58753 221 aa5.55□□□□□ -1.52
COL21A1-212ENST00000535941 OXLD1Q5BKU9 147 aa5.55□□□□□ -1.52
COL21A1-212ENST00000535941 TRAV13-1A0A0B4J241 112 aa5.55□□□□□ -1.52
COL21A1-212ENST00000535941 LOC100131303A0A0U1RQF7 123 aa5.55□□□□□ -1.52
COL21A1-212ENST00000535941 RPL36AP83881 106 aaKnown RBP5.55□□□□□ -1.52
COL21A1-212ENST00000535941 RPL36ALQ969Q0 106 aaKnown RBP5.55□□□□□ -1.52
COL21A1-212ENST00000535941 OPRPNQ99935 248 aaPredicted RBP5.55□□□□□ -1.52
COL21A1-212ENST00000535941 LYSTQ99698 3801 aa5.54□□□□□ -1.52
COL21A1-212ENST00000535941 EIF4EBP3O60516 100 aaPredicted RBP5.54□□□□□ -1.52
COL21A1-212ENST00000535941 NPC2P61916 151 aa5.54□□□□□ -1.52
COL21A1-212ENST00000535941 FAM222AQ5U5X8 452 aa5.54□□□□□ -1.52
COL21A1-212ENST00000535941 DEFB135Q30KP9 77 aa5.54□□□□□ -1.52
COL21A1-212ENST00000535941 CDC42SE2Q9NRR3 84 aa5.54□□□□□ -1.52
COL21A1-212ENST00000535941 TM2D3Q9BRN9 247 aa5.53□□□□□ -1.52
COL21A1-212ENST00000535941 IGLV5-39A0A0G2JS06 123 aa5.53□□□□□ -1.52
COL21A1-212ENST00000535941 TRBV6-8A0A0A6YYG3 113 aa5.53□□□□□ -1.52
COL21A1-212ENST00000535941 A0A1B0GUV1 79 aa5.53□□□□□ -1.52
COL21A1-212ENST00000535941 LINC01600Q96MT4 127 aa5.53□□□□□ -1.52
COL21A1-212ENST00000535941 LST1O00453 97 aa5.52□□□□□ -1.53
COL21A1-212ENST00000535941 SMCR5Q8TEV8 140 aa5.52□□□□□ -1.53
COL21A1-212ENST00000535941 PRO0255Q9UI72 69 aa5.52□□□□□ -1.53
COL21A1-212ENST00000535941 ATRQ13535 2644 aa5.52□□□□□ -1.53
COL21A1-212ENST00000535941 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.52□□□□□ -1.53
COL21A1-212ENST00000535941 IGKV2-29A2NJV5 120 aaPredicted RBP5.52□□□□□ -1.53
COL21A1-212ENST00000535941 LEPROTO15243 131 aa5.52□□□□□ -1.53
COL21A1-212ENST00000535941 CXCL5P42830 114 aa5.52□□□□□ -1.53
COL21A1-212ENST00000535941 DEFB121Q5J5C9 76 aa5.52□□□□□ -1.53
COL21A1-212ENST00000535941 COL7A1Q02388 2944 aa5.51□□□□□ -1.53
COL21A1-212ENST00000535941 IGHV3-38A0A0C4DH36 116 aa5.51□□□□□ -1.53
COL21A1-212ENST00000535941 LITAFQ99732 161 aa5.51□□□□□ -1.53
COL21A1-212ENST00000535941 TRGV2A0A075B6R0 118 aa5.51□□□□□ -1.53
COL21A1-212ENST00000535941 DNHD1Q96M86 4753 aa5.5□□□□□ -1.53
COL21A1-212ENST00000535941 LINC00242Q5T6M2 205 aa5.5□□□□□ -1.53
COL21A1-212ENST00000535941 SDIM1Q6ZPB5 146 aa5.5□□□□□ -1.53
COL21A1-212ENST00000535941 LINC01561Q8N1V8 128 aa5.5□□□□□ -1.53
COL21A1-212ENST00000535941 A0A0J9YXY3 114 aa5.5□□□□□ -1.53
COL21A1-212ENST00000535941 K7EIL1 84 aa5.5□□□□□ -1.53
COL21A1-212ENST00000535941 RPL18AQ02543 176 aaKnown RBP5.5□□□□□ -1.53
COL21A1-212ENST00000535941 SERP2Q8N6R1 65 aa5.5□□□□□ -1.53
COL21A1-212ENST00000535941 A0A0J9YXV3 536 aa5.49□□□□□ -1.53
COL21A1-212ENST00000535941 TMEM243Q9BU79 118 aa5.49□□□□□ -1.53
COL21A1-212ENST00000535941 TRGV4A0A0C4DH28 118 aa5.49□□□□□ -1.53
COL21A1-212ENST00000535941 SPART-AS1P0CW21 52 aa5.49□□□□□ -1.53
COL21A1-212ENST00000535941 COX6A2Q02221 97 aa5.49□□□□□ -1.53
COL21A1-212ENST00000535941 JMJD1CQ15652 2540 aa5.49□□□□□ -1.53
COL21A1-212ENST00000535941 IGHV1-58A0A0C4DH39 117 aa5.49□□□□□ -1.53
COL21A1-212ENST00000535941 C5orf38Q86SI9 138 aa5.49□□□□□ -1.53
COL21A1-212ENST00000535941 MDFIQ99750 246 aa5.49□□□□□ -1.53
COL21A1-212ENST00000535941 VPS13DQ5THJ4 4388 aa5.48□□□□□ -1.53
COL21A1-212ENST00000535941 IGKV3D-7A0A0C4DH55 119 aa5.48□□□□□ -1.53
COL21A1-212ENST00000535941 DNAL4O96015 105 aa5.48□□□□□ -1.53
COL21A1-212ENST00000535941 A0A096LPF7 62 aa5.48□□□□□ -1.53
COL21A1-212ENST00000535941 INAFM2P0DMQ5 153 aa5.48□□□□□ -1.53
COL21A1-212ENST00000535941 STARD9Q9P2P6 4700 aa5.48□□□□□ -1.53
COL21A1-212ENST00000535941 IGLV4-60A0A075B6I1 120 aa5.47□□□□□ -1.53
COL21A1-212ENST00000535941 GYPEP15421 78 aa5.47□□□□□ -1.53
COL21A1-212ENST00000535941 PLECQ15149 4684 aaKnown RBP5.47□□□□□ -1.53
COL21A1-212ENST00000535941 SMIM1B2RUZ4 78 aa5.47□□□□□ -1.53
COL21A1-212ENST00000535941 TIMM17BO60830 172 aa5.47□□□□□ -1.53
COL21A1-212ENST00000535941 BAALC-AS2P0C853 105 aa5.47□□□□□ -1.53
COL21A1-212ENST00000535941 S100A7L2Q5SY68 101 aa5.47□□□□□ -1.53
COL21A1-212ENST00000535941 PRR34Q9NV39 138 aa5.47□□□□□ -1.53
COL21A1-212ENST00000535941 NDUFA12Q9UI09 145 aa5.47□□□□□ -1.53
COL21A1-212ENST00000535941 IGHV3OR16-9A0A0B4J2B5 98 aa5.46□□□□□ -1.53
COL21A1-212ENST00000535941 IGHV3-30-3P0DP02 117 aa5.46□□□□□ -1.53
COL21A1-212ENST00000535941 DEFB130BP0DP73 79 aa5.46□□□□□ -1.53
COL21A1-212ENST00000535941 DEFB130AP0DP74 79 aa5.46□□□□□ -1.53
COL21A1-212ENST00000535941 ZNF625Q96I27 306 aaPredicted RBP5.46□□□□□ -1.53
COL21A1-212ENST00000535941 DAD1P61803 113 aa5.46□□□□□ -1.54
COL21A1-212ENST00000535941 HIST1H4AP62805 103 aaKnown RBP5.46□□□□□ -1.54
COL21A1-212ENST00000535941 FRAS1Q86XX4 4008 aa5.46□□□□□ -1.54
COL21A1-212ENST00000535941 A0A087WVE0 104 aa5.46□□□□□ -1.54
COL21A1-212ENST00000535941 NDUFA1O15239 70 aa5.46□□□□□ -1.54
COL21A1-212ENST00000535941 TENM3Q9P273 2699 aa5.45□□□□□ -1.54
COL21A1-212ENST00000535941 USP17L23D6RBM5 183 aa5.45□□□□□ -1.54
COL21A1-212ENST00000535941 MIAQ16674 131 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms