RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 H7C423 109 aa8.54□□□□□ -1.04
SCARB1-204ENST00000535005 IGHV3-30-3P0DP02 117 aa8.54□□□□□ -1.04
SCARB1-204ENST00000535005 COPS9Q8WXC6 57 aa8.54□□□□□ -1.04
SCARB1-204ENST00000535005 Q9UF83 564 aa8.54□□□□□ -1.04
SCARB1-204ENST00000535005 NUPR2A6NF83 97 aa8.54□□□□□ -1.04
SCARB1-204ENST00000535005 H7C2G1 150 aa8.54□□□□□ -1.04
SCARB1-204ENST00000535005 LINC00694P0DN24 101 aa8.54□□□□□ -1.04
SCARB1-204ENST00000535005 MUC7Q8TAX7 377 aa8.54□□□□□ -1.04
SCARB1-204ENST00000535005 TMEM101Q96IK0 257 aa8.54□□□□□ -1.04
SCARB1-204ENST00000535005 A0A0J9YXV3 536 aa8.53□□□□□ -1.04
SCARB1-204ENST00000535005 LOC100131303A0A0U1RQF7 123 aa8.53□□□□□ -1.04
SCARB1-204ENST00000535005 TINCRA0A1B0GVN0 87 aa8.53□□□□□ -1.04
SCARB1-204ENST00000535005 CCDC179H3BU77 68 aa8.53□□□□□ -1.04
SCARB1-204ENST00000535005 GYPEP15421 78 aa8.53□□□□□ -1.04
SCARB1-204ENST00000535005 RPL36AP83881 106 aaKnown RBP8.53□□□□□ -1.04
SCARB1-204ENST00000535005 CFAP161Q6P656 301 aa8.53□□□□□ -1.04
SCARB1-204ENST00000535005 RPL36ALQ969Q0 106 aaKnown RBP8.53□□□□□ -1.04
SCARB1-204ENST00000535005 PPDPFQ9H3Y8 114 aa8.52□□□□□ -1.04
SCARB1-204ENST00000535005 KLK5Q9Y337 293 aaPredicted RBP8.52□□□□□ -1.04
SCARB1-204ENST00000535005 TNFRSF18Q9Y5U5 241 aa8.52□□□□□ -1.04
SCARB1-204ENST00000535005 A0A096LPF7 62 aa8.52□□□□□ -1.05
SCARB1-204ENST00000535005 NDUFA12Q9UI09 145 aa8.52□□□□□ -1.05
SCARB1-204ENST00000535005 PRSS2P07478 247 aa8.49□□□□□ -1.05
SCARB1-204ENST00000535005 MEIG1Q5JSS6 88 aa8.49□□□□□ -1.05
SCARB1-204ENST00000535005 DAZ4Q86SG3 579 aaKnown RBP8.49□□□□□ -1.05
SCARB1-204ENST00000535005 DAZ3Q9NR90 486 aaKnown RBP8.49□□□□□ -1.05
SCARB1-204ENST00000535005 APLNQ9ULZ1 77 aa8.49□□□□□ -1.05
SCARB1-204ENST00000535005 C3orf84H3BNL1 204 aa8.48□□□□□ -1.05
SCARB1-204ENST00000535005 NDUFA1O15239 70 aa8.48□□□□□ -1.05
SCARB1-204ENST00000535005 TIRAPP58753 221 aa8.48□□□□□ -1.05
SCARB1-204ENST00000535005 CIRBPQ14011 172 aaKnown RBP8.48□□□□□ -1.05
SCARB1-204ENST00000535005 OPRPNQ99935 248 aaPredicted RBP8.48□□□□□ -1.05
SCARB1-204ENST00000535005 CSMD3Q7Z407 3707 aa8.47□□□□□ -1.05
SCARB1-204ENST00000535005 LINC00643Q86TS7 51 aa8.47□□□□□ -1.05
SCARB1-204ENST00000535005 IGHV3-64A0A075B6Q5 118 aa8.47□□□□□ -1.05
SCARB1-204ENST00000535005 IGLV5-45A0A087WSX0 123 aa8.47□□□□□ -1.05
SCARB1-204ENST00000535005 CXCL5P42830 114 aa8.47□□□□□ -1.05
SCARB1-204ENST00000535005 ADAMTSL4-AS1Q5T5F5 129 aa8.46□□□□□ -1.06
SCARB1-204ENST00000535005 SMIM20Q8N5G0 67 aa8.46□□□□□ -1.06
SCARB1-204ENST00000535005 TENM2Q9NT68 2774 aa8.46□□□□□ -1.06
SCARB1-204ENST00000535005 COX7A2LO14548 114 aa8.45□□□□□ -1.06
SCARB1-204ENST00000535005 TRACP01848 142 aa8.45□□□□□ -1.06
SCARB1-204ENST00000535005 LYPD5Q6UWN5 251 aa8.45□□□□□ -1.06
SCARB1-204ENST00000535005 SDIM1Q6ZPB5 146 aa8.45□□□□□ -1.06
SCARB1-204ENST00000535005 STARD9Q9P2P6 4700 aa8.45□□□□□ -1.06
SCARB1-204ENST00000535005 IGHV3-38A0A0C4DH36 116 aa8.45□□□□□ -1.06
SCARB1-204ENST00000535005 HERV-K104P63124 156 aa8.45□□□□□ -1.06
SCARB1-204ENST00000535005 DAND5Q8N907 189 aa8.45□□□□□ -1.06
SCARB1-204ENST00000535005 FAM104AQ969W3 186 aa8.45□□□□□ -1.06
SCARB1-204ENST00000535005 PLECQ15149 4684 aaKnown RBP8.44□□□□□ -1.06
SCARB1-204ENST00000535005 ESRGQ1W209 222 aa8.44□□□□□ -1.06
SCARB1-204ENST00000535005 CASC10Q5T4H9 136 aa8.44□□□□□ -1.06
SCARB1-204ENST00000535005 NTM-AS1Q6ZSK4 140 aa8.44□□□□□ -1.06
SCARB1-204ENST00000535005 CLEC2BQ92478 149 aa8.44□□□□□ -1.06
SCARB1-204ENST00000535005 TRBV6-8A0A0A6YYG3 113 aa8.43□□□□□ -1.06
SCARB1-204ENST00000535005 UBE2D4Q9Y2X8 147 aa8.43□□□□□ -1.06
SCARB1-204ENST00000535005 TRAV8-3A0A0A6YYJ7 113 aa8.43□□□□□ -1.06
SCARB1-204ENST00000535005 UQCRQO14949 82 aa8.43□□□□□ -1.06
SCARB1-204ENST00000535005 INAFM2P0DMQ5 153 aa8.43□□□□□ -1.06
SCARB1-204ENST00000535005 LELP1Q5T871 98 aa8.43□□□□□ -1.06
SCARB1-204ENST00000535005 FAM19A3Q7Z5A8 133 aa8.43□□□□□ -1.06
SCARB1-204ENST00000535005 CCL18P55774 89 aa8.42□□□□□ -1.06
SCARB1-204ENST00000535005 CHCHD7Q9BUK0 85 aa8.42□□□□□ -1.06
SCARB1-204ENST00000535005 C3orf22Q8N5N4 141 aa8.41□□□□□ -1.06
SCARB1-204ENST00000535005 IGLV5-39A0A0G2JS06 123 aa8.4□□□□□ -1.06
SCARB1-204ENST00000535005 HERVK_113P63121 156 aa8.4□□□□□ -1.06
SCARB1-204ENST00000535005 LINC00308Q8TCZ7 52 aa8.4□□□□□ -1.06
SCARB1-204ENST00000535005 DEFB104AQ8WTQ1 72 aa8.4□□□□□ -1.06
SCARB1-204ENST00000535005 LINC00588Q9Y4M8 146 aa8.4□□□□□ -1.06
SCARB1-204ENST00000535005 FAM236AA0A1B0GUQ0 79 aa8.4□□□□□ -1.07
SCARB1-204ENST00000535005 FAM236BA0A1B0GV22 79 aa8.4□□□□□ -1.07
SCARB1-204ENST00000535005 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.07
SCARB1-204ENST00000535005 CHCHD5Q9BSY4 110 aa8.4□□□□□ -1.07
SCARB1-204ENST00000535005 UPK3BQ9BT76 320 aa8.4□□□□□ -1.07
SCARB1-204ENST00000535005 VPS13DQ5THJ4 4388 aa8.39□□□□□ -1.07
SCARB1-204ENST00000535005 C5orf38Q86SI9 138 aa8.39□□□□□ -1.07
SCARB1-204ENST00000535005 TMEM243Q9BU79 118 aa8.39□□□□□ -1.07
SCARB1-204ENST00000535005 A0A1B0GX51 115 aa8.38□□□□□ -1.07
SCARB1-204ENST00000535005 C9orf153Q5TBE3 101 aa8.38□□□□□ -1.07
SCARB1-204ENST00000535005 CSDC2Q9Y534 153 aaKnown RBP8.37□□□□□ -1.07
SCARB1-204ENST00000535005 ATOX1O00244 68 aa8.36□□□□□ -1.07
SCARB1-204ENST00000535005 DNAH1Q9P2D7 4330 aa8.36□□□□□ -1.07
SCARB1-204ENST00000535005 WFDC10BQ8IUB3 73 aa8.36□□□□□ -1.07
SCARB1-204ENST00000535005 UBE2DNLQ8IWF7 75 aa8.36□□□□□ -1.07
SCARB1-204ENST00000535005 CDKN2A-AS1Q9UH64 79 aa8.36□□□□□ -1.07
SCARB1-204ENST00000535005 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.35□□□□□ -1.07
SCARB1-204ENST00000535005 TRAV13-2A0A0B4J235 113 aa8.35□□□□□ -1.07
SCARB1-204ENST00000535005 IGKV2-29A2NJV5 120 aaPredicted RBP8.35□□□□□ -1.07
SCARB1-204ENST00000535005 HIST1H4AP62805 103 aaKnown RBP8.35□□□□□ -1.07
SCARB1-204ENST00000535005 RPS28P62857 69 aaKnown RBP8.35□□□□□ -1.07
SCARB1-204ENST00000535005 A0A1B0GUV1 79 aa8.34□□□□□ -1.07
SCARB1-204ENST00000535005 UBE2L6O14933 153 aa8.34□□□□□ -1.07
SCARB1-204ENST00000535005 BAALC-AS2P0C853 105 aa8.34□□□□□ -1.07
SCARB1-204ENST00000535005 DNAH10OSP0CZ25 163 aa8.34□□□□□ -1.07
SCARB1-204ENST00000535005 CRYGAP11844 174 aa8.34□□□□□ -1.07
SCARB1-204ENST00000535005 COX7CP15954 63 aa8.34□□□□□ -1.07
SCARB1-204ENST00000535005 DGAT2L7PQ6IED9 249 aa8.34□□□□□ -1.07
SCARB1-204ENST00000535005 Q9H8V8 135 aa8.34□□□□□ -1.07
SCARB1-204ENST00000535005 ALMS1Q8TCU4 4167 aa8.34□□□□□ -1.07
SCARB1-204ENST00000535005 J3KT08 172 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 147.4 ms