RNA–Protein interactions for RNA: ENST00000534602.5

GSDMD-216, Transcript of gasdermin D, humanhuman

TSL 2

Gene GSDMD, Length 480 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-216ENST00000534602 TOMM7Q9P0U1 55 aa13.08□□□□□ -0.32
GSDMD-216ENST00000534602 LINC01549A6NIU2 74 aa13.07□□□□□ -0.32
GSDMD-216ENST00000534602 SEC11CQ9BY50 192 aa13.07□□□□□ -0.32
GSDMD-216ENST00000534602 GNB1LQ9BYB4 327 aa13.07□□□□□ -0.32
GSDMD-216ENST00000534602 GEMIN7Q9H840 131 aaKnown RBP13.07□□□□□ -0.32
GSDMD-216ENST00000534602 CDKN2A-AS1Q9UH64 79 aa13.07□□□□□ -0.32
GSDMD-216ENST00000534602 LRP2P98164 4655 aa13.06□□□□□ -0.32
GSDMD-216ENST00000534602 S100PP25815 95 aa13.06□□□□□ -0.32
GSDMD-216ENST00000534602 LINC01546A6NGU7 62 aa13.05□□□□□ -0.32
GSDMD-216ENST00000534602 UBE2BP63146 152 aa13.05□□□□□ -0.32
GSDMD-216ENST00000534602 IFITM2Q01629 132 aa13.05□□□□□ -0.32
GSDMD-216ENST00000534602 SCGB3A1Q96QR1 104 aa13.05□□□□□ -0.32
GSDMD-216ENST00000534602 H0Y9J4 135 aa13.04□□□□□ -0.32
GSDMD-216ENST00000534602 COX19Q49B96 90 aa13.04□□□□□ -0.32
GSDMD-216ENST00000534602 F8VRH5 84 aa13.03□□□□□ -0.32
GSDMD-216ENST00000534602 CXCL5P42830 114 aa13.02□□□□□ -0.33
GSDMD-216ENST00000534602 TINCRA0A1B0GVN0 87 aa13.01□□□□□ -0.33
GSDMD-216ENST00000534602 LINC00469Q8N7U9 141 aa13□□□□□ -0.33
GSDMD-216ENST00000534602 IGLV5-45A0A087WSX0 123 aa12.99□□□□□ -0.33
GSDMD-216ENST00000534602 PDZD11Q5EBL8 140 aa12.99□□□□□ -0.33
GSDMD-216ENST00000534602 SMIM1B2RUZ4 78 aa12.98□□□□□ -0.33
GSDMD-216ENST00000534602 LBHQ53QV2 105 aaPredicted RBP12.98□□□□□ -0.33
GSDMD-216ENST00000534602 C10orf91Q5T1B1 145 aa12.97□□□□□ -0.33
GSDMD-216ENST00000534602 PRR26Q8N8Z3 221 aa12.97□□□□□ -0.33
GSDMD-216ENST00000534602 CST9LQ9H4G1 147 aa12.97□□□□□ -0.33
GSDMD-216ENST00000534602 XAGE1AQ9HD64 81 aa12.97□□□□□ -0.33
GSDMD-216ENST00000534602 C22orf24Q9Y442 160 aa12.97□□□□□ -0.33
GSDMD-216ENST00000534602 IGLV1-50A0A075B6I6 118 aa12.96□□□□□ -0.33
GSDMD-216ENST00000534602 COMMD7Q86VX2 200 aa12.96□□□□□ -0.33
GSDMD-216ENST00000534602 TP73-AS1Q9UF72 201 aa12.96□□□□□ -0.33
GSDMD-216ENST00000534602 NUPR1O60356 82 aa12.95□□□□□ -0.34
GSDMD-216ENST00000534602 PMVKQ15126 192 aa12.95□□□□□ -0.34
GSDMD-216ENST00000534602 RHEBQ15382 184 aa12.95□□□□□ -0.34
GSDMD-216ENST00000534602 FA2HQ7L5A8 372 aa12.95□□□□□ -0.34
GSDMD-216ENST00000534602 COX7B2Q8TF08 81 aa12.95□□□□□ -0.34
GSDMD-216ENST00000534602 MRPL18Q9H0U6 180 aaKnown RBP12.95□□□□□ -0.34
GSDMD-216ENST00000534602 KRTAP1-4P0C5Y4 121 aa12.94□□□□□ -0.34
GSDMD-216ENST00000534602 FABP9Q0Z7S8 132 aa12.94□□□□□ -0.34
GSDMD-216ENST00000534602 SMCO4Q9NRQ5 59 aa12.94□□□□□ -0.34
GSDMD-216ENST00000534602 CARHSP1Q9Y2V2 147 aaKnown RBP12.93□□□□□ -0.34
GSDMD-216ENST00000534602 ZNF861PO60384 105 aa12.92□□□□□ -0.34
GSDMD-216ENST00000534602 MRPL55Q7Z7F7 128 aaKnown RBP12.91□□□□□ -0.34
GSDMD-216ENST00000534602 RPS10P5Q9NQ39 176 aa12.91□□□□□ -0.34
GSDMD-216ENST00000534602 H3BRM9 83 aa12.89□□□□□ -0.35
GSDMD-216ENST00000534602 RPL13AP40429 203 aaKnown RBP12.89□□□□□ -0.35
GSDMD-216ENST00000534602 SPINK8P0C7L1 97 aa12.88□□□□□ -0.35
GSDMD-216ENST00000534602 RNF213Q63HN8 5207 aa12.86□□□□□ -0.35
GSDMD-216ENST00000534602 IGLC3P0DOY3 106 aa12.86□□□□□ -0.35
GSDMD-216ENST00000534602 IGLV5-37A0A075B6J1 123 aa12.84□□□□□ -0.35
GSDMD-216ENST00000534602 A0A096LNJ9 63 aa12.84□□□□□ -0.35
GSDMD-216ENST00000534602 BCE1O60756 84 aa12.84□□□□□ -0.35
GSDMD-216ENST00000534602 ATP5LO75964 103 aa12.84□□□□□ -0.35
GSDMD-216ENST00000534602 LINC00614P0C842 121 aa12.84□□□□□ -0.35
GSDMD-216ENST00000534602 RPL28P46779 137 aaKnown RBP12.84□□□□□ -0.35
GSDMD-216ENST00000534602 C18orf32Q8TCD1 76 aa12.84□□□□□ -0.35
GSDMD-216ENST00000534602 TRAPPC1Q9Y5R8 145 aa12.84□□□□□ -0.35
GSDMD-216ENST00000534602 IGLV5-39A0A0G2JS06 123 aa12.83□□□□□ -0.36
GSDMD-216ENST00000534602 URB1-AS1Q96HZ7 61 aa12.83□□□□□ -0.36
GSDMD-216ENST00000534602 LINC00167Q96N53 147 aa12.83□□□□□ -0.36
GSDMD-216ENST00000534602 HBDP02042 147 aa12.82□□□□□ -0.36
GSDMD-216ENST00000534602 RAB5BP61020 215 aa12.82□□□□□ -0.36
GSDMD-216ENST00000534602 NDUFA6P56556 154 aa12.8□□□□□ -0.36
GSDMD-216ENST00000534602 RPL37AP8A6NKH3 93 aa12.79□□□□□ -0.36
GSDMD-216ENST00000534602 ZNF22P17026 224 aaPredicted RBP12.79□□□□□ -0.36
GSDMD-216ENST00000534602 NKAPP1Q8N9T2 125 aa12.79□□□□□ -0.36
GSDMD-216ENST00000534602 GAGE10A6NGK3 116 aa12.76□□□□□ -0.37
GSDMD-216ENST00000534602 APOC3P02656 99 aa12.76□□□□□ -0.37
GSDMD-216ENST00000534602 COX17Q14061 63 aa12.76□□□□□ -0.37
GSDMD-216ENST00000534602 SNAPINO95295 136 aa12.75□□□□□ -0.37
GSDMD-216ENST00000534602 PFN2P35080 140 aa12.75□□□□□ -0.37
GSDMD-216ENST00000534602 NDUFA5Q16718 116 aa12.75□□□□□ -0.37
GSDMD-216ENST00000534602 SFTA2Q6UW10 78 aa12.75□□□□□ -0.37
GSDMD-216ENST00000534602 SVBPQ8N300 66 aa12.75□□□□□ -0.37
GSDMD-216ENST00000534602 PMCHL1Q16048 86 aa12.74□□□□□ -0.37
GSDMD-216ENST00000534602 BAGE3Q86Y29 109 aa12.74□□□□□ -0.37
GSDMD-216ENST00000534602 ERG28Q9UKR5 140 aa12.74□□□□□ -0.37
GSDMD-216ENST00000534602 LPAP08519 4548 aa12.73□□□□□ -0.37
GSDMD-216ENST00000534602 KRTAP13-1Q8IUC0 172 aa12.73□□□□□ -0.37
GSDMD-216ENST00000534602 C11orf86A6NJI1 115 aa12.72□□□□□ -0.37
GSDMD-216ENST00000534602 CRYGAP11844 174 aa12.72□□□□□ -0.37
GSDMD-216ENST00000534602 SND1-IT1Q9HBX3 110 aa12.72□□□□□ -0.37
GSDMD-216ENST00000534602 A0A087X002 238 aa12.7□□□□□ -0.38
GSDMD-216ENST00000534602 VPREB1P12018 145 aa12.7□□□□□ -0.38
GSDMD-216ENST00000534602 UBE2AP49459 152 aa12.7□□□□□ -0.38
GSDMD-216ENST00000534602 RPL24P83731 157 aaKnown RBP12.7□□□□□ -0.38
GSDMD-216ENST00000534602 TMEM170BQ5T4T1 132 aa12.7□□□□□ -0.38
GSDMD-216ENST00000534602 IGKV2-28A0A075B6P5 120 aa12.68□□□□□ -0.38
GSDMD-216ENST00000534602 IGKV2D-28P01615 120 aa12.68□□□□□ -0.38
GSDMD-216ENST00000534602 CHCHD1Q96BP2 118 aaKnown RBP12.68□□□□□ -0.38
GSDMD-216ENST00000534602 ZNF625Q96I27 306 aaPredicted RBP12.68□□□□□ -0.38
GSDMD-216ENST00000534602 SCO1O75880 301 aa12.67□□□□□ -0.38
GSDMD-216ENST00000534602 YPEL4Q96NS1 127 aa12.67□□□□□ -0.38
GSDMD-216ENST00000534602 CHTOPQ9Y3Y2 248 aaKnown RBP12.67□□□□□ -0.38
GSDMD-216ENST00000534602 TRAV12-1A0A0B4J245 112 aa12.66□□□□□ -0.38
GSDMD-216ENST00000534602 PRR4Q16378 134 aa12.66□□□□□ -0.38
GSDMD-216ENST00000534602 TYMSOSQ8TAI1 123 aa12.66□□□□□ -0.38
GSDMD-216ENST00000534602 FAM229BQ4G0N7 80 aa12.65□□□□□ -0.38
GSDMD-216ENST00000534602 TMEM126AQ9H061 195 aa12.64□□□□□ -0.39
GSDMD-216ENST00000534602 IFI27L1Q96BM0 104 aa12.63□□□□□ -0.39
GSDMD-216ENST00000534602 TMEM223A0PJW6 202 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms