RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 CKS1BP61024 79 aa14.28□□□□□ -0.12
YIF1A-213ENST00000534374 SCGB3A1Q96QR1 104 aa14.28□□□□□ -0.12
YIF1A-213ENST00000534374 GEMIN7Q9H840 131 aaKnown RBP14.28□□□□□ -0.12
YIF1A-213ENST00000534374 CDKN2A-AS1Q9UH64 79 aa14.27□□□□□ -0.13
YIF1A-213ENST00000534374 TOMM7Q9P0U1 55 aa14.26□□□□□ -0.13
YIF1A-213ENST00000534374 FAM19A5Q7Z5A7 132 aaPredicted RBP14.25□□□□□ -0.13
YIF1A-213ENST00000534374 KRTAP7-1Q8IUC3 87 aa14.25□□□□□ -0.13
YIF1A-213ENST00000534374 RHEBQ15382 184 aa14.24□□□□□ -0.13
YIF1A-213ENST00000534374 CARHSP1Q9Y2V2 147 aaKnown RBP14.24□□□□□ -0.13
YIF1A-213ENST00000534374 IGLV7-43P04211 117 aa14.23□□□□□ -0.13
YIF1A-213ENST00000534374 C9orf129Q5T035 196 aaKnown RBP14.23□□□□□ -0.13
YIF1A-213ENST00000534374 TINCRA0A1B0GVN0 87 aa14.22□□□□□ -0.13
YIF1A-213ENST00000534374 FABP9Q0Z7S8 132 aa14.22□□□□□ -0.13
YIF1A-213ENST00000534374 KRTAP11-1Q8IUC1 163 aa14.22□□□□□ -0.13
YIF1A-213ENST00000534374 MRPL18Q9H0U6 180 aaKnown RBP14.22□□□□□ -0.13
YIF1A-213ENST00000534374 RPS10P5Q9NQ39 176 aa14.21□□□□□ -0.13
YIF1A-213ENST00000534374 M0QXV9 152 aa14.2□□□□□ -0.14
YIF1A-213ENST00000534374 FA2HQ7L5A8 372 aa14.2□□□□□ -0.14
YIF1A-213ENST00000534374 DIRC1Q969H9 104 aa14.2□□□□□ -0.14
YIF1A-213ENST00000534374 CST9LQ9H4G1 147 aa14.2□□□□□ -0.14
YIF1A-213ENST00000534374 IGLV5-45A0A087WSX0 123 aa14.19□□□□□ -0.14
YIF1A-213ENST00000534374 F8VRH5 84 aa14.19□□□□□ -0.14
YIF1A-213ENST00000534374 CXCL5P42830 114 aa14.19□□□□□ -0.14
YIF1A-213ENST00000534374 LINC00469Q8N7U9 141 aa14.19□□□□□ -0.14
YIF1A-213ENST00000534374 ODF1Q14990 250 aa14.18□□□□□ -0.14
YIF1A-213ENST00000534374 PDZD11Q5EBL8 140 aa14.18□□□□□ -0.14
YIF1A-213ENST00000534374 SMCO4Q9NRQ5 59 aa14.18□□□□□ -0.14
YIF1A-213ENST00000534374 UBE2BP63146 152 aa14.17□□□□□ -0.14
YIF1A-213ENST00000534374 SMIM1B2RUZ4 78 aa14.16□□□□□ -0.14
YIF1A-213ENST00000534374 PMVKQ15126 192 aa14.16□□□□□ -0.14
YIF1A-213ENST00000534374 H0Y9J4 135 aa14.13□□□□□ -0.15
YIF1A-213ENST00000534374 COX7B2Q8TF08 81 aa14.13□□□□□ -0.15
YIF1A-213ENST00000534374 LBHQ53QV2 105 aaPredicted RBP14.12□□□□□ -0.15
YIF1A-213ENST00000534374 XAGE1AQ9HD64 81 aa14.12□□□□□ -0.15
YIF1A-213ENST00000534374 C22orf24Q9Y442 160 aa14.12□□□□□ -0.15
YIF1A-213ENST00000534374 TRAPPC1Q9Y5R8 145 aa14.12□□□□□ -0.15
YIF1A-213ENST00000534374 LRP2P98164 4655 aa14.1□□□□□ -0.15
YIF1A-213ENST00000534374 LINC00614P0C842 121 aa14.1□□□□□ -0.15
YIF1A-213ENST00000534374 H3BRM9 83 aa14.09□□□□□ -0.15
YIF1A-213ENST00000534374 TP73-AS1Q9UF72 201 aa14.09□□□□□ -0.15
YIF1A-213ENST00000534374 C18orf32Q8TCD1 76 aa14.08□□□□□ -0.16
YIF1A-213ENST00000534374 A0A096LNJ9 63 aa14.07□□□□□ -0.16
YIF1A-213ENST00000534374 APOC3P02656 99 aa14.07□□□□□ -0.16
YIF1A-213ENST00000534374 SPINK8P0C7L1 97 aa14.07□□□□□ -0.16
YIF1A-213ENST00000534374 URB1-AS1Q96HZ7 61 aa14.07□□□□□ -0.16
YIF1A-213ENST00000534374 NUPR1O60356 82 aa14.06□□□□□ -0.16
YIF1A-213ENST00000534374 SNAPINO95295 136 aa14.06□□□□□ -0.16
YIF1A-213ENST00000534374 IGLC3P0DOY3 106 aa14.06□□□□□ -0.16
YIF1A-213ENST00000534374 NDUFA5Q16718 116 aa14.05□□□□□ -0.16
YIF1A-213ENST00000534374 SVBPQ8N300 66 aa14.05□□□□□ -0.16
YIF1A-213ENST00000534374 ZNF861PO60384 105 aa14.04□□□□□ -0.16
YIF1A-213ENST00000534374 HBDP02042 147 aa14.04□□□□□ -0.16
YIF1A-213ENST00000534374 RAB5BP61020 215 aa14.04□□□□□ -0.16
YIF1A-213ENST00000534374 MRPL55Q7Z7F7 128 aaKnown RBP14.04□□□□□ -0.16
YIF1A-213ENST00000534374 PRR26Q8N8Z3 221 aa14.04□□□□□ -0.16
YIF1A-213ENST00000534374 IGLV1-50A0A075B6I6 118 aa14.03□□□□□ -0.16
YIF1A-213ENST00000534374 IGLV5-39A0A0G2JS06 123 aa14.02□□□□□ -0.17
YIF1A-213ENST00000534374 KRTAP1-4P0C5Y4 121 aa14.02□□□□□ -0.17
YIF1A-213ENST00000534374 NDUFA6P56556 154 aa14.02□□□□□ -0.17
YIF1A-213ENST00000534374 ATP5LO75964 103 aa14.01□□□□□ -0.17
YIF1A-213ENST00000534374 ZNF22P17026 224 aaPredicted RBP13.99□□□□□ -0.17
YIF1A-213ENST00000534374 LINC00167Q96N53 147 aa13.98□□□□□ -0.17
YIF1A-213ENST00000534374 RNF213Q63HN8 5207 aa13.97□□□□□ -0.17
YIF1A-213ENST00000534374 IGLV5-37A0A075B6J1 123 aa13.97□□□□□ -0.17
YIF1A-213ENST00000534374 PMCHL1Q16048 86 aa13.97□□□□□ -0.17
YIF1A-213ENST00000534374 BAGE3Q86Y29 109 aa13.96□□□□□ -0.17
YIF1A-213ENST00000534374 BCE1O60756 84 aa13.95□□□□□ -0.18
YIF1A-213ENST00000534374 RPL13AP40429 203 aaKnown RBP13.95□□□□□ -0.18
YIF1A-213ENST00000534374 YPEL4Q96NS1 127 aa13.95□□□□□ -0.18
YIF1A-213ENST00000534374 RPL28P46779 137 aaKnown RBP13.93□□□□□ -0.18
YIF1A-213ENST00000534374 COX17Q14061 63 aa13.93□□□□□ -0.18
YIF1A-213ENST00000534374 C11orf86A6NJI1 115 aa13.92□□□□□ -0.18
YIF1A-213ENST00000534374 RPL37AP8A6NKH3 93 aa13.92□□□□□ -0.18
YIF1A-213ENST00000534374 PFN2P35080 140 aa13.92□□□□□ -0.18
YIF1A-213ENST00000534374 SFTA2Q6UW10 78 aa13.92□□□□□ -0.18
YIF1A-213ENST00000534374 CHCHD1Q96BP2 118 aaKnown RBP13.92□□□□□ -0.18
YIF1A-213ENST00000534374 NKAPP1Q8N9T2 125 aa13.91□□□□□ -0.18
YIF1A-213ENST00000534374 TMEM170BQ5T4T1 132 aa13.9□□□□□ -0.18
YIF1A-213ENST00000534374 ERG28Q9UKR5 140 aa13.9□□□□□ -0.18
YIF1A-213ENST00000534374 GAGE10A6NGK3 116 aa13.89□□□□□ -0.19
YIF1A-213ENST00000534374 CHTOPQ9Y3Y2 248 aaKnown RBP13.89□□□□□ -0.19
YIF1A-213ENST00000534374 SND1-IT1Q9HBX3 110 aa13.88□□□□□ -0.19
YIF1A-213ENST00000534374 TRAV12-1A0A0B4J245 112 aa13.87□□□□□ -0.19
YIF1A-213ENST00000534374 IFI27L1Q96BM0 104 aa13.86□□□□□ -0.19
YIF1A-213ENST00000534374 RPL24P83731 157 aaKnown RBP13.85□□□□□ -0.19
YIF1A-213ENST00000534374 SLC7A5P1Q8MH63 180 aa13.85□□□□□ -0.19
YIF1A-213ENST00000534374 ZNF625Q96I27 306 aaPredicted RBP13.85□□□□□ -0.19
YIF1A-213ENST00000534374 VPREB1P12018 145 aa13.84□□□□□ -0.19
YIF1A-213ENST00000534374 KRTAP13-1Q8IUC0 172 aa13.83□□□□□ -0.2
YIF1A-213ENST00000534374 TMEM223A0PJW6 202 aa13.82□□□□□ -0.2
YIF1A-213ENST00000534374 CBLN2Q8IUK8 224 aa13.82□□□□□ -0.2
YIF1A-213ENST00000534374 LPAP08519 4548 aa13.81□□□□□ -0.2
YIF1A-213ENST00000534374 IGKV2-28A0A075B6P5 120 aa13.8□□□□□ -0.2
YIF1A-213ENST00000534374 SCO1O75880 301 aa13.8□□□□□ -0.2
YIF1A-213ENST00000534374 IGKV2D-28P01615 120 aa13.8□□□□□ -0.2
YIF1A-213ENST00000534374 UBE2AP49459 152 aa13.8□□□□□ -0.2
YIF1A-213ENST00000534374 CRYGAP11844 174 aa13.79□□□□□ -0.2
YIF1A-213ENST00000534374 HSBP1O75506 76 aa13.78□□□□□ -0.2
YIF1A-213ENST00000534374 LINC00158P58513 81 aa13.77□□□□□ -0.21
YIF1A-213ENST00000534374 A0A087X002 238 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms