RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ITPR2Q14571 2701 aa13.65□□□□□ -0.22
CAPN1-226ENST00000533820 IL17DQ8TAD2 202 aa13.65□□□□□ -0.22
CAPN1-226ENST00000533820 IGLV4-60A0A075B6I1 120 aa13.65□□□□□ -0.23
CAPN1-226ENST00000533820 GIG44P09565 113 aaPredicted RBP13.65□□□□□ -0.23
CAPN1-226ENST00000533820 CXCL5P42830 114 aa13.65□□□□□ -0.23
CAPN1-226ENST00000533820 LINC00158P58513 81 aa13.65□□□□□ -0.23
CAPN1-226ENST00000533820 NOTCH2Q04721 2471 aa13.64□□□□□ -0.23
CAPN1-226ENST00000533820 SERP2Q8N6R1 65 aa13.64□□□□□ -0.23
CAPN1-226ENST00000533820 UPK3BQ9BT76 320 aa13.64□□□□□ -0.23
CAPN1-226ENST00000533820 HIST1H4AP62805 103 aaKnown RBP13.62□□□□□ -0.23
CAPN1-226ENST00000533820 FHL2Q14192 279 aa13.62□□□□□ -0.23
CAPN1-226ENST00000533820 DEFB130BP0DP73 79 aa13.61□□□□□ -0.23
CAPN1-226ENST00000533820 DEFB130AP0DP74 79 aa13.61□□□□□ -0.23
CAPN1-226ENST00000533820 LINC00337Q8N6G1 96 aa13.61□□□□□ -0.23
CAPN1-226ENST00000533820 COX7B2Q8TF08 81 aa13.61□□□□□ -0.23
CAPN1-226ENST00000533820 SND1-IT1Q9HBX3 110 aa13.6□□□□□ -0.23
CAPN1-226ENST00000533820 PLAC8L1A1L4L8 177 aa13.6□□□□□ -0.23
CAPN1-226ENST00000533820 CRPP02741 224 aa13.6□□□□□ -0.23
CAPN1-226ENST00000533820 CLPSL2Q6UWE3 100 aa13.6□□□□□ -0.23
CAPN1-226ENST00000533820 TMEM86BQ8N661 226 aa13.6□□□□□ -0.23
CAPN1-226ENST00000533820 COPS9Q8WXC6 57 aa13.59□□□□□ -0.23
CAPN1-226ENST00000533820 A0A096LPF7 62 aa13.58□□□□□ -0.23
CAPN1-226ENST00000533820 KRTAP1-3Q8IUG1 177 aa13.58□□□□□ -0.24
CAPN1-226ENST00000533820 V9GYY9 64 aa13.58□□□□□ -0.24
CAPN1-226ENST00000533820 IGKV2-28A0A075B6P5 120 aa13.57□□□□□ -0.24
CAPN1-226ENST00000533820 IGKV2D-28P01615 120 aa13.57□□□□□ -0.24
CAPN1-226ENST00000533820 USP17L23D6RBM5 183 aa13.56□□□□□ -0.24
CAPN1-226ENST00000533820 FAM19A3Q7Z5A8 133 aa13.55□□□□□ -0.24
CAPN1-226ENST00000533820 C16orf74Q96GX8 76 aa13.55□□□□□ -0.24
CAPN1-226ENST00000533820 ZNF843Q8N446 348 aa13.55□□□□□ -0.24
CAPN1-226ENST00000533820 C22orf24Q9Y442 160 aa13.55□□□□□ -0.24
CAPN1-226ENST00000533820 A0A087WYN8 130 aa13.55□□□□□ -0.24
CAPN1-226ENST00000533820 VWFP04275 2813 aa13.54□□□□□ -0.24
CAPN1-226ENST00000533820 PAX4O43316 350 aa13.54□□□□□ -0.24
CAPN1-226ENST00000533820 LINC01006Q8NI28 216 aa13.54□□□□□ -0.24
CAPN1-226ENST00000533820 SMIM11BQ8TCY0 68 aa13.54□□□□□ -0.24
CAPN1-226ENST00000533820 XCL1P47992 114 aa13.54□□□□□ -0.24
CAPN1-226ENST00000533820 CCL18P55774 89 aa13.54□□□□□ -0.24
CAPN1-226ENST00000533820 C9orf129Q5T035 196 aaKnown RBP13.54□□□□□ -0.24
CAPN1-226ENST00000533820 TENM4Q6N022 2769 aa13.53□□□□□ -0.24
CAPN1-226ENST00000533820 TRBV6-8A0A0A6YYG3 113 aa13.53□□□□□ -0.24
CAPN1-226ENST00000533820 LINC01561Q8N1V8 128 aa13.53□□□□□ -0.24
CAPN1-226ENST00000533820 BRK1Q8WUW1 75 aa13.53□□□□□ -0.24
CAPN1-226ENST00000533820 TRAV13-2A0A0B4J235 113 aa13.52□□□□□ -0.24
CAPN1-226ENST00000533820 SLPIP03973 132 aa13.52□□□□□ -0.25
CAPN1-226ENST00000533820 TRBV6-4A0A1B0GX49 114 aa13.51□□□□□ -0.25
CAPN1-226ENST00000533820 DNAL4O96015 105 aa13.51□□□□□ -0.25
CAPN1-226ENST00000533820 IGHV3OR16-9A0A0B4J2B5 98 aa13.51□□□□□ -0.25
CAPN1-226ENST00000533820 C20orf197Q8N268 126 aa13.5□□□□□ -0.25
CAPN1-226ENST00000533820 C1orf195Q5TG92 126 aa13.5□□□□□ -0.25
CAPN1-226ENST00000533820 HILS1P60008 231 aa13.5□□□□□ -0.25
CAPN1-226ENST00000533820 C6orf226Q5I0X4 101 aa13.5□□□□□ -0.25
CAPN1-226ENST00000533820 C14orf132Q9NPU4 83 aa13.5□□□□□ -0.25
CAPN1-226ENST00000533820 C19orf73Q9NVV2 129 aa13.49□□□□□ -0.25
CAPN1-226ENST00000533820 RPL28P46779 137 aaKnown RBP13.48□□□□□ -0.25
CAPN1-226ENST00000533820 CSNK1G2-AS1Q8NCQ2 148 aa13.48□□□□□ -0.25
CAPN1-226ENST00000533820 LECT2O14960 151 aa13.48□□□□□ -0.25
CAPN1-226ENST00000533820 WFDC9Q8NEX5 89 aa13.48□□□□□ -0.25
CAPN1-226ENST00000533820 FASNP49327 2511 aaKnown RBP13.48□□□□□ -0.25
CAPN1-226ENST00000533820 PRR3P79522 188 aaKnown RBP13.48□□□□□ -0.25
CAPN1-226ENST00000533820 GYPEP15421 78 aa13.47□□□□□ -0.25
CAPN1-226ENST00000533820 IGLV1-51P01701 117 aa13.46□□□□□ -0.25
CAPN1-226ENST00000533820 DEFB4AO15263 64 aa13.46□□□□□ -0.25
CAPN1-226ENST00000533820 LINC00846Q9NV44 126 aa13.46□□□□□ -0.25
CAPN1-226ENST00000533820 TRAV23DV6A0A075B6W5 121 aa13.45□□□□□ -0.26
CAPN1-226ENST00000533820 LINC00959A0A1B0GUT2 108 aa13.45□□□□□ -0.26
CAPN1-226ENST00000533820 GHRHP01286 108 aa13.45□□□□□ -0.26
CAPN1-226ENST00000533820 HELZ2Q9BYK8 2649 aaKnown RBP13.44□□□□□ -0.26
CAPN1-226ENST00000533820 INAFM2P0DMQ5 153 aa13.44□□□□□ -0.26
CAPN1-226ENST00000533820 OVOL2Q9BRP0 275 aa13.44□□□□□ -0.26
CAPN1-226ENST00000533820 IGLV10-54A0A075B6I4 117 aa13.43□□□□□ -0.26
CAPN1-226ENST00000533820 A0A087WZ39 114 aa13.43□□□□□ -0.26
CAPN1-226ENST00000533820 NCR3O14931 201 aa13.43□□□□□ -0.26
CAPN1-226ENST00000533820 Q8N3U1 123 aa13.43□□□□□ -0.26
CAPN1-226ENST00000533820 PF4P02776 101 aa13.42□□□□□ -0.26
CAPN1-226ENST00000533820 LINC00474Q9P2X8 69 aa13.41□□□□□ -0.26
CAPN1-226ENST00000533820 IBA57-AS1B1ANH7 110 aa13.41□□□□□ -0.26
CAPN1-226ENST00000533820 FAM222AQ5U5X8 452 aa13.41□□□□□ -0.26
CAPN1-226ENST00000533820 FP248Q71RG6 208 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-226ENST00000533820 PDZD2O15018 2839 aa13.4□□□□□ -0.26
CAPN1-226ENST00000533820 NDUFC2O95298 119 aa13.39□□□□□ -0.27
CAPN1-226ENST00000533820 C16orf95Q9H693 158 aa13.39□□□□□ -0.27
CAPN1-226ENST00000533820 CMC4P56277 68 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-226ENST00000533820 Q6JHZ5 121 aa13.38□□□□□ -0.27
CAPN1-226ENST00000533820 LINC00482Q8N8I6 264 aa13.38□□□□□ -0.27
CAPN1-226ENST00000533820 RNASE1P07998 156 aaKnown RBP13.38□□□□□ -0.27
CAPN1-226ENST00000533820 C9orf116Q5BN46 136 aaPredicted RBP13.38□□□□□ -0.27
CAPN1-226ENST00000533820 SERP1Q9Y6X1 66 aa13.38□□□□□ -0.27
CAPN1-226ENST00000533820 HECTD1Q9ULT8 2610 aa13.37□□□□□ -0.27
CAPN1-226ENST00000533820 UNC79Q9P2D8 2635 aa13.36□□□□□ -0.27
CAPN1-226ENST00000533820 SS18Q15532 418 aa13.36□□□□□ -0.27
CAPN1-226ENST00000533820 SMR3AQ99954 134 aa13.36□□□□□ -0.27
CAPN1-226ENST00000533820 LINC00269Q8N2A0 174 aa13.36□□□□□ -0.27
CAPN1-226ENST00000533820 TENM1Q9UKZ4 2725 aa13.34□□□□□ -0.27
CAPN1-226ENST00000533820 H0YGX0 51 aa13.34□□□□□ -0.27
CAPN1-226ENST00000533820 KRTAP1-1Q07627 177 aa13.34□□□□□ -0.27
CAPN1-226ENST00000533820 FAM19A1Q7Z5A9 133 aa13.34□□□□□ -0.27
CAPN1-226ENST00000533820 ATRQ13535 2644 aa13.34□□□□□ -0.27
CAPN1-226ENST00000533820 SPATA3Q8NHX4 192 aa13.33□□□□□ -0.27
CAPN1-226ENST00000533820 SNURFQ9Y675 71 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms