RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 MEIG1Q5JSS6 88 aa3.86□□□□□ -1.79
PCF11-205ENST00000530906 LINC00308Q8TCZ7 52 aa3.86□□□□□ -1.79
PCF11-205ENST00000530906 VPS25Q9BRG1 176 aa3.86□□□□□ -1.79
PCF11-205ENST00000530906 C11orf68Q9H3H3 251 aaKnown RBP3.86□□□□□ -1.79
PCF11-205ENST00000530906 ICOSQ9Y6W8 199 aa3.86□□□□□ -1.79
PCF11-205ENST00000530906 OTOGQ6ZRI0 2925 aa3.86□□□□□ -1.79
PCF11-205ENST00000530906 IGLV4-60A0A075B6I1 120 aa3.85□□□□□ -1.79
PCF11-205ENST00000530906 TRAV13-2A0A0B4J235 113 aa3.85□□□□□ -1.79
PCF11-205ENST00000530906 ADAMTSL4-AS1Q5T5F5 129 aa3.85□□□□□ -1.79
PCF11-205ENST00000530906 LELP1Q5T871 98 aa3.85□□□□□ -1.79
PCF11-205ENST00000530906 TEN1Q86WV5 123 aa3.85□□□□□ -1.79
PCF11-205ENST00000530906 Q8IZM0 81 aa3.85□□□□□ -1.79
PCF11-205ENST00000530906 LINC00476Q8WZB0 136 aa3.85□□□□□ -1.79
PCF11-205ENST00000530906 NOTCH3Q9UM47 2321 aa3.85□□□□□ -1.79
PCF11-205ENST00000530906 NBPF19A0A087WUL8 3843 aa3.85□□□□□ -1.79
PCF11-205ENST00000530906 AKAP9Q99996 3911 aa3.84□□□□□ -1.79
PCF11-205ENST00000530906 GAGE12HA6NDE8 117 aa3.84□□□□□ -1.79
PCF11-205ENST00000530906 H3BT86 120 aa3.84□□□□□ -1.79
PCF11-205ENST00000530906 TCL1BO95988 128 aa3.84□□□□□ -1.79
PCF11-205ENST00000530906 COX17Q14061 63 aa3.84□□□□□ -1.79
PCF11-205ENST00000530906 WFDC2Q14508 124 aa3.84□□□□□ -1.79
PCF11-205ENST00000530906 CD164L2Q6UWJ8 174 aa3.84□□□□□ -1.79
PCF11-205ENST00000530906 C3orf56Q8N813 242 aa3.84□□□□□ -1.79
PCF11-205ENST00000530906 PPDPFLQ8WWR9 84 aa3.84□□□□□ -1.79
PCF11-205ENST00000530906 CARD19Q96LW7 228 aa3.84□□□□□ -1.79
PCF11-205ENST00000530906 TMEM262E9PQX1 116 aa3.83□□□□□ -1.8
PCF11-205ENST00000530906 COX7A2LO14548 114 aa3.83□□□□□ -1.8
PCF11-205ENST00000530906 TRIAP1O43715 76 aa3.83□□□□□ -1.8
PCF11-205ENST00000530906 SLC25A20O43772 301 aa3.83□□□□□ -1.8
PCF11-205ENST00000530906 RPL13AP40429 203 aaKnown RBP3.83□□□□□ -1.8
PCF11-205ENST00000530906 FOXI1Q12951 378 aa3.83□□□□□ -1.8
PCF11-205ENST00000530906 ETDBQ3ZM63 59 aa3.83□□□□□ -1.8
PCF11-205ENST00000530906 LINC01620Q4KN68 170 aa3.83□□□□□ -1.8
PCF11-205ENST00000530906 HIVEP1P15822 2718 aa3.83□□□□□ -1.8
PCF11-205ENST00000530906 ANK3Q12955 4377 aaKnown RBP3.82□□□□□ -1.8
PCF11-205ENST00000530906 TRAV8-4A0A0B4J246 113 aa3.82□□□□□ -1.8
PCF11-205ENST00000530906 TRBV10-2A0A0K0K1G8 114 aa3.82□□□□□ -1.8
PCF11-205ENST00000530906 LST1O00453 97 aa3.82□□□□□ -1.8
PCF11-205ENST00000530906 TRACP01848 142 aa3.82□□□□□ -1.8
PCF11-205ENST00000530906 CRPP02741 224 aa3.82□□□□□ -1.8
PCF11-205ENST00000530906 REG3AQ06141 175 aa3.82□□□□□ -1.8
PCF11-205ENST00000530906 KRTAP24-1Q3LI83 254 aa3.82□□□□□ -1.8
PCF11-205ENST00000530906 C6orf226Q5I0X4 101 aa3.82□□□□□ -1.8
PCF11-205ENST00000530906 ANKRD29Q8N6D5 301 aa3.82□□□□□ -1.8
PCF11-205ENST00000530906 SPATA3Q8NHX4 192 aa3.82□□□□□ -1.8
PCF11-205ENST00000530906 PRR34Q9NV39 138 aa3.82□□□□□ -1.8
PCF11-205ENST00000530906 TEP1Q99973 2627 aaKnown RBP3.81□□□□□ -1.8
PCF11-205ENST00000530906 C9JAW5 83 aa3.81□□□□□ -1.8
PCF11-205ENST00000530906 F8WDY8 70 aa3.81□□□□□ -1.8
PCF11-205ENST00000530906 H7C2G1 150 aa3.81□□□□□ -1.8
PCF11-205ENST00000530906 ANGP03950 147 aaKnown RBP3.81□□□□□ -1.8
PCF11-205ENST00000530906 SCGB1A1P11684 91 aa3.81□□□□□ -1.8
PCF11-205ENST00000530906 RPL28P46779 137 aaKnown RBP3.81□□□□□ -1.8
PCF11-205ENST00000530906 CKS1BP61024 79 aa3.81□□□□□ -1.8
PCF11-205ENST00000530906 CFAP161Q6P656 301 aa3.81□□□□□ -1.8
PCF11-205ENST00000530906 SND1-IT1Q9HBX3 110 aa3.81□□□□□ -1.8
PCF11-205ENST00000530906 TOMM7Q9P0U1 55 aa3.81□□□□□ -1.8
PCF11-205ENST00000530906 CELA1Q9UNI1 258 aa3.81□□□□□ -1.8
PCF11-205ENST00000530906 KLK5Q9Y337 293 aaPredicted RBP3.81□□□□□ -1.8
PCF11-205ENST00000530906 F8P00451 2351 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 A0A096LPF7 62 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 IGKV3OR2-268A0A0C4DH90 116 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 KRTAP29-1A8MX34 341 aaPredicted RBP3.8□□□□□ -1.8
PCF11-205ENST00000530906 H0YGX0 51 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 NDUFC2O95298 119 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 MALP21145 153 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 XCL1P47992 114 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 LINC00158P58513 81 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 SOSTDC1Q6X4U4 206 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 C5orf38Q86SI9 138 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 LINC00269Q8N2A0 174 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 MIR7-3HGQ8N6C7 128 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 DAND5Q8N907 189 aa3.8□□□□□ -1.8
PCF11-205ENST00000530906 CHCHD10Q8WYQ3 142 aaPredicted RBP3.8□□□□□ -1.8
PCF11-205ENST00000530906 GVQW2A0A096LPI5 108 aaPredicted RBP3.79□□□□□ -1.8
PCF11-205ENST00000530906 FAM240AA0A1B0GVK7 77 aa3.79□□□□□ -1.8
PCF11-205ENST00000530906 A0A1B0GX51 115 aa3.79□□□□□ -1.8
PCF11-205ENST00000530906 DEFB4AO15263 64 aa3.79□□□□□ -1.8
PCF11-205ENST00000530906 CCL18P55774 89 aa3.79□□□□□ -1.8
PCF11-205ENST00000530906 NPC2P61916 151 aa3.79□□□□□ -1.8
PCF11-205ENST00000530906 KIAA0087Q14695 138 aa3.79□□□□□ -1.8
PCF11-205ENST00000530906 LYPD5Q6UWN5 251 aa3.79□□□□□ -1.8
PCF11-205ENST00000530906 C2orf82Q6UX34 121 aa3.79□□□□□ -1.8
PCF11-205ENST00000530906 SIGMAR1Q99720 223 aa3.79□□□□□ -1.8
PCF11-205ENST00000530906 ATRQ13535 2644 aa3.79□□□□□ -1.8
PCF11-205ENST00000530906 A0A0J9YWU9 116 aa3.78□□□□□ -1.8
PCF11-205ENST00000530906 SNCGO76070 127 aa3.78□□□□□ -1.8
PCF11-205ENST00000530906 HTN3P15516 51 aa3.78□□□□□ -1.8
PCF11-205ENST00000530906 PCP4P48539 62 aa3.78□□□□□ -1.8
PCF11-205ENST00000530906 DEFB121Q5J5C9 76 aa3.78□□□□□ -1.8
PCF11-205ENST00000530906 C15orf53Q8NAA6 179 aa3.78□□□□□ -1.8
PCF11-205ENST00000530906 UBE2WQ96B02 151 aa3.78□□□□□ -1.8
PCF11-205ENST00000530906 IGKV2-28A0A075B6P5 120 aa3.77□□□□□ -1.81
PCF11-205ENST00000530906 A0A0U1RRA0 63 aa3.77□□□□□ -1.81
PCF11-205ENST00000530906 B5MCH6 92 aa3.77□□□□□ -1.81
PCF11-205ENST00000530906 IGKV2D-28P01615 120 aa3.77□□□□□ -1.81
PCF11-205ENST00000530906 ACYP1P07311 99 aa3.77□□□□□ -1.81
PCF11-205ENST00000530906 KPRPQ5T749 579 aaPredicted RBP3.77□□□□□ -1.81
PCF11-205ENST00000530906 MTURNQ8N3F0 131 aa3.77□□□□□ -1.81
PCF11-205ENST00000530906 TMEM126AQ9H061 195 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms