RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 K7EMI3 77 aa13.29□□□□□ -0.28
PACSIN3-207ENST00000530513 ZNF861PO60384 105 aa13.29□□□□□ -0.28
PACSIN3-207ENST00000530513 PRSS2P07478 247 aa13.29□□□□□ -0.28
PACSIN3-207ENST00000530513 NPSP0C0P6 89 aa13.29□□□□□ -0.28
PACSIN3-207ENST00000530513 SEC11CQ9BY50 192 aa13.29□□□□□ -0.28
PACSIN3-207ENST00000530513 CDKN2A-AS1Q9UH64 79 aa13.29□□□□□ -0.28
PACSIN3-207ENST00000530513 Q8IZM0 81 aa13.28□□□□□ -0.28
PACSIN3-207ENST00000530513 XAGE1AQ9HD64 81 aa13.28□□□□□ -0.28
PACSIN3-207ENST00000530513 CARHSP1Q9Y2V2 147 aaKnown RBP13.28□□□□□ -0.28
PACSIN3-207ENST00000530513 C22orf24Q9Y442 160 aa13.28□□□□□ -0.28
PACSIN3-207ENST00000530513 CKS1BP61024 79 aa13.27□□□□□ -0.29
PACSIN3-207ENST00000530513 TOMM6Q96B49 74 aa13.27□□□□□ -0.29
PACSIN3-207ENST00000530513 TIMM17AQ99595 171 aa13.26□□□□□ -0.29
PACSIN3-207ENST00000530513 ALKBH7Q9BT30 221 aaPredicted RBP13.26□□□□□ -0.29
PACSIN3-207ENST00000530513 NUPR1O60356 82 aa13.25□□□□□ -0.29
PACSIN3-207ENST00000530513 HERVK_113P63121 156 aa13.25□□□□□ -0.29
PACSIN3-207ENST00000530513 C6orf226Q5I0X4 101 aa13.25□□□□□ -0.29
PACSIN3-207ENST00000530513 C10orf91Q5T1B1 145 aa13.23□□□□□ -0.29
PACSIN3-207ENST00000530513 GEMIN7Q9H840 131 aaKnown RBP13.23□□□□□ -0.29
PACSIN3-207ENST00000530513 A0A087X002 238 aa13.22□□□□□ -0.29
PACSIN3-207ENST00000530513 TSPAN13O95857 204 aa13.22□□□□□ -0.29
PACSIN3-207ENST00000530513 SMIM1B2RUZ4 78 aa13.21□□□□□ -0.29
PACSIN3-207ENST00000530513 LBHQ53QV2 105 aaPredicted RBP13.21□□□□□ -0.29
PACSIN3-207ENST00000530513 PAPPA-AS1Q5QFB9 102 aa13.21□□□□□ -0.29
PACSIN3-207ENST00000530513 SCGB3A1Q96QR1 104 aa13.21□□□□□ -0.29
PACSIN3-207ENST00000530513 F8VRH5 84 aa13.2□□□□□ -0.3
PACSIN3-207ENST00000530513 SEC11AP67812 179 aa13.2□□□□□ -0.3
PACSIN3-207ENST00000530513 ERASQ7Z444 233 aa13.2□□□□□ -0.3
PACSIN3-207ENST00000530513 MRPL55Q7Z7F7 128 aaKnown RBP13.19□□□□□ -0.3
PACSIN3-207ENST00000530513 TP73-AS1Q9UF72 201 aa13.19□□□□□ -0.3
PACSIN3-207ENST00000530513 TRAV9-1A0A075B6T8 112 aa13.18□□□□□ -0.3
PACSIN3-207ENST00000530513 LINC01546A6NGU7 62 aa13.17□□□□□ -0.3
PACSIN3-207ENST00000530513 BCE1O60756 84 aa13.17□□□□□ -0.3
PACSIN3-207ENST00000530513 G0S2P27469 103 aa13.17□□□□□ -0.3
PACSIN3-207ENST00000530513 IGLV5-45A0A087WSX0 123 aa13.16□□□□□ -0.3
PACSIN3-207ENST00000530513 RPL28P46779 137 aaKnown RBP13.16□□□□□ -0.3
PACSIN3-207ENST00000530513 RPS10P5Q9NQ39 176 aa13.16□□□□□ -0.3
PACSIN3-207ENST00000530513 TINCRA0A1B0GVN0 87 aa13.15□□□□□ -0.3
PACSIN3-207ENST00000530513 CXCL5P42830 114 aa13.15□□□□□ -0.3
PACSIN3-207ENST00000530513 COX7B2Q8TF08 81 aa13.15□□□□□ -0.3
PACSIN3-207ENST00000530513 GNB1LQ9BYB4 327 aa13.15□□□□□ -0.3
PACSIN3-207ENST00000530513 SPINK8P0C7L1 97 aa13.14□□□□□ -0.31
PACSIN3-207ENST00000530513 CST9LQ9H4G1 147 aa13.14□□□□□ -0.31
PACSIN3-207ENST00000530513 FAT4Q6V0I7 4981 aa13.13□□□□□ -0.31
PACSIN3-207ENST00000530513 RPL37AP8A6NKH3 93 aa13.13□□□□□ -0.31
PACSIN3-207ENST00000530513 APOC3P02656 99 aa13.13□□□□□ -0.31
PACSIN3-207ENST00000530513 S100PP25815 95 aa13.13□□□□□ -0.31
PACSIN3-207ENST00000530513 RHEBQ15382 184 aa13.13□□□□□ -0.31
PACSIN3-207ENST00000530513 PDZD11Q5EBL8 140 aa13.13□□□□□ -0.31
PACSIN3-207ENST00000530513 LINC00167Q96N53 147 aa13.13□□□□□ -0.31
PACSIN3-207ENST00000530513 TYMSOSQ8TAI1 123 aa13.12□□□□□ -0.31
PACSIN3-207ENST00000530513 A0A0U1RQV1 116 aa13.11□□□□□ -0.31
PACSIN3-207ENST00000530513 CRYGAP11844 174 aa13.11□□□□□ -0.31
PACSIN3-207ENST00000530513 ANAPC11Q9NYG5 84 aa13.11□□□□□ -0.31
PACSIN3-207ENST00000530513 MUC17Q685J3 4493 aa13.1□□□□□ -0.31
PACSIN3-207ENST00000530513 GAGE10A6NGK3 116 aa13.1□□□□□ -0.31
PACSIN3-207ENST00000530513 MRPL18Q9H0U6 180 aaKnown RBP13.1□□□□□ -0.31
PACSIN3-207ENST00000530513 FA2HQ7L5A8 372 aa13.09□□□□□ -0.31
PACSIN3-207ENST00000530513 PMVKQ15126 192 aa13.08□□□□□ -0.32
PACSIN3-207ENST00000530513 KRTAP13-2Q52LG2 175 aa13.08□□□□□ -0.32
PACSIN3-207ENST00000530513 KRTAP13-1Q8IUC0 172 aa13.08□□□□□ -0.32
PACSIN3-207ENST00000530513 A0A096LNJ9 63 aa13.07□□□□□ -0.32
PACSIN3-207ENST00000530513 RAB5BP61020 215 aa13.07□□□□□ -0.32
PACSIN3-207ENST00000530513 FABP9Q0Z7S8 132 aa13.07□□□□□ -0.32
PACSIN3-207ENST00000530513 NDUFA5Q16718 116 aa13.07□□□□□ -0.32
PACSIN3-207ENST00000530513 SVBPQ8N300 66 aa13.06□□□□□ -0.32
PACSIN3-207ENST00000530513 IGLV5-37A0A075B6J1 123 aa13.05□□□□□ -0.32
PACSIN3-207ENST00000530513 LINC01549A6NIU2 74 aa13.05□□□□□ -0.32
PACSIN3-207ENST00000530513 URB1-AS1Q96HZ7 61 aa13.05□□□□□ -0.32
PACSIN3-207ENST00000530513 SMCO4Q9NRQ5 59 aa13.05□□□□□ -0.32
PACSIN3-207ENST00000530513 SCO1O75880 301 aa13.04□□□□□ -0.32
PACSIN3-207ENST00000530513 SNAPINO95295 136 aa13.04□□□□□ -0.32
PACSIN3-207ENST00000530513 SLC7A5P1Q8MH63 180 aa13.04□□□□□ -0.32
PACSIN3-207ENST00000530513 RETNLBQ9BQ08 111 aa13.04□□□□□ -0.32
PACSIN3-207ENST00000530513 KRTAP9-2Q9BYQ4 174 aa13.04□□□□□ -0.32
PACSIN3-207ENST00000530513 UBE2AP49459 152 aa13.03□□□□□ -0.32
PACSIN3-207ENST00000530513 COX19Q49B96 90 aa13.03□□□□□ -0.32
PACSIN3-207ENST00000530513 IGLC3P0DOY3 106 aa13.02□□□□□ -0.33
PACSIN3-207ENST00000530513 NKAPP1Q8N9T2 125 aa13.02□□□□□ -0.33
PACSIN3-207ENST00000530513 IGLV5-39A0A0G2JS06 123 aa13.01□□□□□ -0.33
PACSIN3-207ENST00000530513 PMCHL1Q16048 86 aa13.01□□□□□ -0.33
PACSIN3-207ENST00000530513 IGKV2-28A0A075B6P5 120 aa13□□□□□ -0.33
PACSIN3-207ENST00000530513 H3BRM9 83 aa13□□□□□ -0.33
PACSIN3-207ENST00000530513 IGKV2D-28P01615 120 aa13□□□□□ -0.33
PACSIN3-207ENST00000530513 ZNF22P17026 224 aaPredicted RBP13□□□□□ -0.33
PACSIN3-207ENST00000530513 LCE2AQ5TA79 106 aaPredicted RBP13□□□□□ -0.33
PACSIN3-207ENST00000530513 ATP5LO75964 103 aa12.99□□□□□ -0.33
PACSIN3-207ENST00000530513 PFN2P35080 140 aa12.99□□□□□ -0.33
PACSIN3-207ENST00000530513 NDUFA6P56556 154 aa12.99□□□□□ -0.33
PACSIN3-207ENST00000530513 FAM229BQ4G0N7 80 aa12.99□□□□□ -0.33
PACSIN3-207ENST00000530513 LINC00304Q8N9R0 145 aa12.99□□□□□ -0.33
PACSIN3-207ENST00000530513 C18orf32Q8TCD1 76 aa12.99□□□□□ -0.33
PACSIN3-207ENST00000530513 PRLHP81277 87 aa12.97□□□□□ -0.33
PACSIN3-207ENST00000530513 Q8NDZ9 215 aa12.95□□□□□ -0.34
PACSIN3-207ENST00000530513 TRAPPC1Q9Y5R8 145 aa12.95□□□□□ -0.34
PACSIN3-207ENST00000530513 C11orf86A6NJI1 115 aa12.94□□□□□ -0.34
PACSIN3-207ENST00000530513 HBDP02042 147 aa12.94□□□□□ -0.34
PACSIN3-207ENST00000530513 VPREB1P12018 145 aa12.94□□□□□ -0.34
PACSIN3-207ENST00000530513 LINC00614P0C842 121 aa12.93□□□□□ -0.34
PACSIN3-207ENST00000530513 ZNF625Q96I27 306 aaPredicted RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms