RNA–Protein interactions for RNA: ENST00000528768.5

USF1-208, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 505 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-208ENST00000528768 A0A1B0GUV1 79 aa8.19□□□□□ -1.1
USF1-208ENST00000528768 TMEM262E9PQX1 116 aa8.19□□□□□ -1.1
USF1-208ENST00000528768 IGHV3-33P01772 117 aa8.19□□□□□ -1.1
USF1-208ENST00000528768 PLECQ15149 4684 aaKnown RBP8.19□□□□□ -1.1
USF1-208ENST00000528768 VPS25Q9BRG1 176 aa8.19□□□□□ -1.1
USF1-208ENST00000528768 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
USF1-208ENST00000528768 F5H768 121 aa8.17□□□□□ -1.1
USF1-208ENST00000528768 LY6G6CO95867 125 aa8.17□□□□□ -1.1
USF1-208ENST00000528768 MRPL23Q16540 153 aaKnown RBP8.17□□□□□ -1.1
USF1-208ENST00000528768 LINC01561Q8N1V8 128 aa8.17□□□□□ -1.1
USF1-208ENST00000528768 IGKV3OR2-268A0A0C4DH90 116 aa8.16□□□□□ -1.1
USF1-208ENST00000528768 TRBV30A0A0K0K1B3 111 aa8.16□□□□□ -1.1
USF1-208ENST00000528768 RBX1P62877 108 aa8.16□□□□□ -1.1
USF1-208ENST00000528768 ATXN8Q156A1 80 aa8.16□□□□□ -1.1
USF1-208ENST00000528768 ADAMTSL4-AS1Q5T5F5 129 aa8.16□□□□□ -1.1
USF1-208ENST00000528768 ZNF625Q96I27 306 aaPredicted RBP8.16□□□□□ -1.1
USF1-208ENST00000528768 IGLV4-60A0A075B6I1 120 aa8.15□□□□□ -1.1
USF1-208ENST00000528768 A0A087WZ39 114 aa8.15□□□□□ -1.1
USF1-208ENST00000528768 LINC00959A0A1B0GUT2 108 aa8.15□□□□□ -1.1
USF1-208ENST00000528768 H7C2G1 150 aa8.15□□□□□ -1.1
USF1-208ENST00000528768 Q8NAQ8 132 aa8.15□□□□□ -1.1
USF1-208ENST00000528768 LINC00308Q8TCZ7 52 aa8.15□□□□□ -1.1
USF1-208ENST00000528768 ICOSQ9Y6W8 199 aa8.15□□□□□ -1.1
USF1-208ENST00000528768 WFDC2Q14508 124 aa8.14□□□□□ -1.11
USF1-208ENST00000528768 TOMM7Q9P0U1 55 aa8.14□□□□□ -1.11
USF1-208ENST00000528768 IGHV3OR16-9A0A0B4J2B5 98 aa8.13□□□□□ -1.11
USF1-208ENST00000528768 TCL1BO95988 128 aa8.13□□□□□ -1.11
USF1-208ENST00000528768 PRO0461Q9UI25 63 aa8.13□□□□□ -1.11
USF1-208ENST00000528768 M0QXV9 152 aa8.12□□□□□ -1.11
USF1-208ENST00000528768 DEFB4AO15263 64 aa8.12□□□□□ -1.11
USF1-208ENST00000528768 NPC2P61916 151 aa8.12□□□□□ -1.11
USF1-208ENST00000528768 HECTD4Q9Y4D8 3996 aa8.12□□□□□ -1.11
USF1-208ENST00000528768 NUPR2A6NF83 97 aa8.11□□□□□ -1.11
USF1-208ENST00000528768 IBA57-AS1B1ANH7 110 aa8.11□□□□□ -1.11
USF1-208ENST00000528768 RPL13AP40429 203 aaKnown RBP8.11□□□□□ -1.11
USF1-208ENST00000528768 C6orf226Q5I0X4 101 aa8.11□□□□□ -1.11
USF1-208ENST00000528768 LELP1Q5T871 98 aa8.11□□□□□ -1.11
USF1-208ENST00000528768 TRAV13-2A0A0B4J235 113 aa8.1□□□□□ -1.11
USF1-208ENST00000528768 HTN3P15516 51 aa8.1□□□□□ -1.11
USF1-208ENST00000528768 CXCL5P42830 114 aa8.1□□□□□ -1.11
USF1-208ENST00000528768 LINC00158P58513 81 aa8.1□□□□□ -1.11
USF1-208ENST00000528768 ETDBQ3ZM63 59 aa8.1□□□□□ -1.11
USF1-208ENST00000528768 C5orf38Q86SI9 138 aa8.1□□□□□ -1.11
USF1-208ENST00000528768 A0A096LPF7 62 aa8.09□□□□□ -1.11
USF1-208ENST00000528768 A0A0U1RRA0 63 aa8.09□□□□□ -1.11
USF1-208ENST00000528768 H3BNG1 76 aa8.09□□□□□ -1.11
USF1-208ENST00000528768 ANGP03950 147 aaKnown RBP8.09□□□□□ -1.11
USF1-208ENST00000528768 CFAP161Q6P656 301 aa8.09□□□□□ -1.11
USF1-208ENST00000528768 CD164L2Q6UWJ8 174 aa8.09□□□□□ -1.11
USF1-208ENST00000528768 Q8IZM0 81 aa8.09□□□□□ -1.11
USF1-208ENST00000528768 DAND5Q8N907 189 aa8.09□□□□□ -1.11
USF1-208ENST00000528768 PPDPFLQ8WWR9 84 aa8.09□□□□□ -1.11
USF1-208ENST00000528768 C9JAW5 83 aa8.08□□□□□ -1.12
USF1-208ENST00000528768 COX7A2LO14548 114 aa8.08□□□□□ -1.12
USF1-208ENST00000528768 TRIAP1O43715 76 aa8.08□□□□□ -1.12
USF1-208ENST00000528768 SLC25A20O43772 301 aa8.08□□□□□ -1.12
USF1-208ENST00000528768 EIF4EBP3O60516 100 aaPredicted RBP8.08□□□□□ -1.12
USF1-208ENST00000528768 XCL1P47992 114 aa8.08□□□□□ -1.12
USF1-208ENST00000528768 LINC01620Q4KN68 170 aa8.08□□□□□ -1.12
USF1-208ENST00000528768 TEN1Q86WV5 123 aa8.08□□□□□ -1.12
USF1-208ENST00000528768 CELA1Q9UNI1 258 aa8.08□□□□□ -1.12
USF1-208ENST00000528768 KIAA1109Q2LD37 5005 aa8.07□□□□□ -1.12
USF1-208ENST00000528768 CRPP02741 224 aa8.07□□□□□ -1.12
USF1-208ENST00000528768 MALP21145 153 aa8.07□□□□□ -1.12
USF1-208ENST00000528768 CKS1BP61024 79 aa8.07□□□□□ -1.12
USF1-208ENST00000528768 REG3AQ06141 175 aa8.07□□□□□ -1.12
USF1-208ENST00000528768 LINC00269Q8N2A0 174 aa8.07□□□□□ -1.12
USF1-208ENST00000528768 KLK5Q9Y337 293 aaPredicted RBP8.07□□□□□ -1.12
USF1-208ENST00000528768 TRBV10-2A0A0K0K1G8 114 aa8.06□□□□□ -1.12
USF1-208ENST00000528768 MIR7-3HGQ8N6C7 128 aa8.06□□□□□ -1.12
USF1-208ENST00000528768 CHCHD10Q8WYQ3 142 aaPredicted RBP8.06□□□□□ -1.12
USF1-208ENST00000528768 C11orf68Q9H3H3 251 aaKnown RBP8.06□□□□□ -1.12
USF1-208ENST00000528768 RETNQ9HD89 108 aa8.06□□□□□ -1.12
USF1-208ENST00000528768 H3BT86 120 aa8.05□□□□□ -1.12
USF1-208ENST00000528768 FOXI1Q12951 378 aa8.05□□□□□ -1.12
USF1-208ENST00000528768 MTURNQ8N3F0 131 aa8.05□□□□□ -1.12
USF1-208ENST00000528768 ANKRD29Q8N6D5 301 aa8.05□□□□□ -1.12
USF1-208ENST00000528768 LINC01600Q96MT4 127 aa8.05□□□□□ -1.12
USF1-208ENST00000528768 SND1-IT1Q9HBX3 110 aa8.05□□□□□ -1.12
USF1-208ENST00000528768 KMT2AQ03164 3969 aa8.04□□□□□ -1.12
USF1-208ENST00000528768 SMCPP49901 116 aaPredicted RBP8.04□□□□□ -1.12
USF1-208ENST00000528768 COX17Q14061 63 aa8.04□□□□□ -1.12
USF1-208ENST00000528768 LST1O00453 97 aa8.03□□□□□ -1.12
USF1-208ENST00000528768 CLPSL2Q6UWE3 100 aa8.03□□□□□ -1.12
USF1-208ENST00000528768 SOSTDC1Q6X4U4 206 aa8.03□□□□□ -1.12
USF1-208ENST00000528768 DNAH10Q8IVF4 4471 aa8.03□□□□□ -1.12
USF1-208ENST00000528768 TRAV8-4A0A0B4J246 113 aa8.02□□□□□ -1.13
USF1-208ENST00000528768 PFN2P35080 140 aa8.02□□□□□ -1.13
USF1-208ENST00000528768 LYPD5Q6UWN5 251 aa8.02□□□□□ -1.13
USF1-208ENST00000528768 C2orf82Q6UX34 121 aa8.02□□□□□ -1.13
USF1-208ENST00000528768 CARD19Q96LW7 228 aa8.01□□□□□ -1.13
USF1-208ENST00000528768 GAGE12HA6NDE8 117 aa8□□□□□ -1.13
USF1-208ENST00000528768 H0YGX0 51 aa8□□□□□ -1.13
USF1-208ENST00000528768 TRACP01848 142 aa8□□□□□ -1.13
USF1-208ENST00000528768 RPL28P46779 137 aaKnown RBP8□□□□□ -1.13
USF1-208ENST00000528768 LINC00336Q6ZUF6 198 aa8□□□□□ -1.13
USF1-208ENST00000528768 SIGMAR1Q99720 223 aa8□□□□□ -1.13
USF1-208ENST00000528768 PCP4P48539 62 aa7.99□□□□□ -1.13
USF1-208ENST00000528768 CCL18P55774 89 aa7.99□□□□□ -1.13
USF1-208ENST00000528768 UBE2WQ96B02 151 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms