RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 DEFB105AQ8NG35 78 aa12.89□□□□□ -0.35
LTBP3-210ENST00000528516 FAM218AQ96MZ4 157 aa12.89□□□□□ -0.35
LTBP3-210ENST00000528516 UBE2D4Q9Y2X8 147 aa12.88□□□□□ -0.35
LTBP3-210ENST00000528516 SVEP1Q4LDE5 3571 aa12.88□□□□□ -0.35
LTBP3-210ENST00000528516 LINC00269Q8N2A0 174 aa12.87□□□□□ -0.35
LTBP3-210ENST00000528516 C16orf74Q96GX8 76 aa12.87□□□□□ -0.35
LTBP3-210ENST00000528516 CYSTM1Q9H1C7 97 aa12.87□□□□□ -0.35
LTBP3-210ENST00000528516 COX6A2Q02221 97 aa12.86□□□□□ -0.35
LTBP3-210ENST00000528516 FAM222AQ5U5X8 452 aa12.86□□□□□ -0.35
LTBP3-210ENST00000528516 UNC79Q9P2D8 2635 aa12.85□□□□□ -0.35
LTBP3-210ENST00000528516 IGKV2D-24A0A075B6R9 120 aa12.85□□□□□ -0.35
LTBP3-210ENST00000528516 TRAV23DV6A0A075B6W5 121 aa12.85□□□□□ -0.35
LTBP3-210ENST00000528516 ODF3L2Q3SX64 289 aa12.85□□□□□ -0.35
LTBP3-210ENST00000528516 SOSTDC1Q6X4U4 206 aa12.85□□□□□ -0.35
LTBP3-210ENST00000528516 RPS28P62857 69 aaKnown RBP12.85□□□□□ -0.35
LTBP3-210ENST00000528516 WFDC9Q8NEX5 89 aa12.84□□□□□ -0.35
LTBP3-210ENST00000528516 C2orf48Q96LS8 159 aa12.84□□□□□ -0.35
LTBP3-210ENST00000528516 LINC00846Q9NV44 126 aa12.84□□□□□ -0.35
LTBP3-210ENST00000528516 CUBNO60494 3623 aa12.84□□□□□ -0.35
LTBP3-210ENST00000528516 ZNF843Q8N446 348 aa12.83□□□□□ -0.35
LTBP3-210ENST00000528516 GHRHP01286 108 aa12.83□□□□□ -0.36
LTBP3-210ENST00000528516 C20orf197Q8N268 126 aa12.83□□□□□ -0.36
LTBP3-210ENST00000528516 LINC01006Q8NI28 216 aa12.82□□□□□ -0.36
LTBP3-210ENST00000528516 CHCHD7Q9BUK0 85 aa12.82□□□□□ -0.36
LTBP3-210ENST00000528516 XAGE1AQ9HD64 81 aa12.82□□□□□ -0.36
LTBP3-210ENST00000528516 TMEM89A2RUT3 159 aa12.82□□□□□ -0.36
LTBP3-210ENST00000528516 NF1P21359 2839 aa12.82□□□□□ -0.36
LTBP3-210ENST00000528516 HIGD2BQ4VC39 106 aa12.82□□□□□ -0.36
LTBP3-210ENST00000528516 IGHV4-28A0A0C4DH34 117 aa12.81□□□□□ -0.36
LTBP3-210ENST00000528516 RBMY1FQ15415 496 aaKnown RBP12.81□□□□□ -0.36
LTBP3-210ENST00000528516 OVOL2Q9BRP0 275 aa12.81□□□□□ -0.36
LTBP3-210ENST00000528516 SETXQ7Z333 2677 aaKnown RBP12.81□□□□□ -0.36
LTBP3-210ENST00000528516 C1orf43Q9BWL3 253 aa12.81□□□□□ -0.36
LTBP3-210ENST00000528516 A0A087WYN8 130 aa12.8□□□□□ -0.36
LTBP3-210ENST00000528516 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.8□□□□□ -0.36
LTBP3-210ENST00000528516 STAB1Q9NY15 2570 aa12.8□□□□□ -0.36
LTBP3-210ENST00000528516 INAFM1C9JVW0 142 aa12.8□□□□□ -0.36
LTBP3-210ENST00000528516 CELSR2Q9HCU4 2923 aa12.79□□□□□ -0.36
LTBP3-210ENST00000528516 HILS1P60008 231 aa12.78□□□□□ -0.36
LTBP3-210ENST00000528516 PRR3P79522 188 aaKnown RBP12.78□□□□□ -0.36
LTBP3-210ENST00000528516 PRB2P02812 416 aaPredicted RBP12.78□□□□□ -0.36
LTBP3-210ENST00000528516 APOC4P55056 127 aa12.78□□□□□ -0.36
LTBP3-210ENST00000528516 LINC00242Q5T6M2 205 aa12.78□□□□□ -0.36
LTBP3-210ENST00000528516 Q6JHZ5 121 aa12.78□□□□□ -0.36
LTBP3-210ENST00000528516 UBL5Q9BZL1 73 aa12.78□□□□□ -0.36
LTBP3-210ENST00000528516 ORMDL1Q9P0S3 153 aa12.77□□□□□ -0.36
LTBP3-210ENST00000528516 TRBV10-1A0A0K0K1A3 114 aa12.77□□□□□ -0.37
LTBP3-210ENST00000528516 PRO0255Q9UI72 69 aa12.77□□□□□ -0.37
LTBP3-210ENST00000528516 SPAG11BQ08648 103 aa12.76□□□□□ -0.37
LTBP3-210ENST00000528516 SMIM11BQ8TCY0 68 aa12.76□□□□□ -0.37
LTBP3-210ENST00000528516 FAM104AQ969W3 186 aa12.76□□□□□ -0.37
LTBP3-210ENST00000528516 CAMK2N2Q96S95 79 aa12.76□□□□□ -0.37
LTBP3-210ENST00000528516 C9orf129Q5T035 196 aaKnown RBP12.76□□□□□ -0.37
LTBP3-210ENST00000528516 SMIM1B2RUZ4 78 aa12.75□□□□□ -0.37
LTBP3-210ENST00000528516 PSCAO43653 123 aa12.75□□□□□ -0.37
LTBP3-210ENST00000528516 COL6A5A8TX70 2615 aa12.75□□□□□ -0.37
LTBP3-210ENST00000528516 C1orf158Q8N1D5 194 aa12.74□□□□□ -0.37
LTBP3-210ENST00000528516 ENHOQ6UWT2 76 aa12.74□□□□□ -0.37
LTBP3-210ENST00000528516 IGLV4-60A0A075B6I1 120 aa12.73□□□□□ -0.37
LTBP3-210ENST00000528516 TRBV6-8A0A0A6YYG3 113 aa12.73□□□□□ -0.37
LTBP3-210ENST00000528516 FBN2P35556 2912 aa12.73□□□□□ -0.37
LTBP3-210ENST00000528516 SPART-AS1P0CW21 52 aa12.73□□□□□ -0.37
LTBP3-210ENST00000528516 C9orf116Q5BN46 136 aaPredicted RBP12.73□□□□□ -0.37
LTBP3-210ENST00000528516 LINC00337Q8N6G1 96 aa12.73□□□□□ -0.37
LTBP3-210ENST00000528516 H0YGX0 51 aa12.73□□□□□ -0.37
LTBP3-210ENST00000528516 LINC01561Q8N1V8 128 aa12.72□□□□□ -0.37
LTBP3-210ENST00000528516 NKAPP1Q8N9T2 125 aa12.72□□□□□ -0.37
LTBP3-210ENST00000528516 PKIGQ9Y2B9 76 aa12.72□□□□□ -0.37
LTBP3-210ENST00000528516 RPL28P46779 137 aaKnown RBP12.71□□□□□ -0.37
LTBP3-210ENST00000528516 KLK9Q2XQG4 91 aa12.71□□□□□ -0.37
LTBP3-210ENST00000528516 BEAN1Q3B7T3 259 aa12.71□□□□□ -0.37
LTBP3-210ENST00000528516 FAM236DA0A1B0GTK5 79 aa12.71□□□□□ -0.37
LTBP3-210ENST00000528516 FAM236CP0DP71 79 aa12.71□□□□□ -0.37
LTBP3-210ENST00000528516 UBE2DNLQ8IWF7 75 aa12.71□□□□□ -0.37
LTBP3-210ENST00000528516 FHL2Q14192 279 aa12.7□□□□□ -0.38
LTBP3-210ENST00000528516 SCXQ7RTU7 201 aa12.7□□□□□ -0.38
LTBP3-210ENST00000528516 OXTP01178 125 aa12.7□□□□□ -0.38
LTBP3-210ENST00000528516 FAM19A1Q7Z5A9 133 aa12.7□□□□□ -0.38
LTBP3-210ENST00000528516 CHCHD10Q8WYQ3 142 aaPredicted RBP12.7□□□□□ -0.38
LTBP3-210ENST00000528516 ITPR2Q14571 2701 aa12.69□□□□□ -0.38
LTBP3-210ENST00000528516 REG3AQ06141 175 aa12.69□□□□□ -0.38
LTBP3-210ENST00000528516 CELSR1Q9NYQ6 3014 aa12.69□□□□□ -0.38
LTBP3-210ENST00000528516 IGLV5-39A0A0G2JS06 123 aa12.69□□□□□ -0.38
LTBP3-210ENST00000528516 CDC42SE2Q9NRR3 84 aa12.68□□□□□ -0.38
LTBP3-210ENST00000528516 C6orf99Q4VX62 202 aa12.67□□□□□ -0.38
LTBP3-210ENST00000528516 C9orf66Q5T8R8 295 aa12.67□□□□□ -0.38
LTBP3-210ENST00000528516 C22orf24Q9Y442 160 aa12.67□□□□□ -0.38
LTBP3-210ENST00000528516 NDUFC2O95298 119 aa12.67□□□□□ -0.38
LTBP3-210ENST00000528516 WIPF1O43516 503 aa12.66□□□□□ -0.38
LTBP3-210ENST00000528516 UPK3BQ9BT76 320 aa12.65□□□□□ -0.38
LTBP3-210ENST00000528516 IGLV5-45A0A087WSX0 123 aa12.65□□□□□ -0.39
LTBP3-210ENST00000528516 SNURFQ9Y675 71 aa12.64□□□□□ -0.39
LTBP3-210ENST00000528516 RBM3P98179 157 aaKnown RBP12.64□□□□□ -0.39
LTBP3-210ENST00000528516 CCL18P55774 89 aa12.64□□□□□ -0.39
LTBP3-210ENST00000528516 A8MTW9 85 aa12.63□□□□□ -0.39
LTBP3-210ENST00000528516 OXLD1Q5BKU9 147 aa12.63□□□□□ -0.39
LTBP3-210ENST00000528516 LINC00959A0A1B0GUT2 108 aa12.62□□□□□ -0.39
LTBP3-210ENST00000528516 IGKV2-28A0A075B6P5 120 aa12.61□□□□□ -0.39
LTBP3-210ENST00000528516 IGKV2D-28P01615 120 aa12.61□□□□□ -0.39
LTBP3-210ENST00000528516 Q5XG85 94 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms