RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 C22orf24Q9Y442 160 aa13.45□□□□□ -0.26
TRAPPC4-208ENST00000527680 HERVK_113P63121 156 aa13.44□□□□□ -0.26
TRAPPC4-208ENST00000527680 LBHQ53QV2 105 aaPredicted RBP13.44□□□□□ -0.26
TRAPPC4-208ENST00000527680 RPL13AP40429 203 aaKnown RBP13.43□□□□□ -0.26
TRAPPC4-208ENST00000527680 CDKN2A-AS1Q9UH64 79 aa13.43□□□□□ -0.26
TRAPPC4-208ENST00000527680 LPAP08519 4548 aa13.42□□□□□ -0.26
TRAPPC4-208ENST00000527680 ZNF861PO60384 105 aa13.42□□□□□ -0.26
TRAPPC4-208ENST00000527680 FAM19A3Q7Z5A8 133 aa13.42□□□□□ -0.26
TRAPPC4-208ENST00000527680 F8VRH5 84 aa13.4□□□□□ -0.26
TRAPPC4-208ENST00000527680 NUPR1O60356 82 aa13.4□□□□□ -0.26
TRAPPC4-208ENST00000527680 PRR4Q16378 134 aa13.4□□□□□ -0.26
TRAPPC4-208ENST00000527680 KIAA1644Q3SXP7 199 aa13.39□□□□□ -0.27
TRAPPC4-208ENST00000527680 TOMM6Q96B49 74 aa13.38□□□□□ -0.27
TRAPPC4-208ENST00000527680 SCGB3A1Q96QR1 104 aa13.38□□□□□ -0.27
TRAPPC4-208ENST00000527680 TIMM17AQ99595 171 aa13.38□□□□□ -0.27
TRAPPC4-208ENST00000527680 CARHSP1Q9Y2V2 147 aaKnown RBP13.38□□□□□ -0.27
TRAPPC4-208ENST00000527680 ERASQ7Z444 233 aa13.36□□□□□ -0.27
TRAPPC4-208ENST00000527680 CXCL5P42830 114 aa13.35□□□□□ -0.27
TRAPPC4-208ENST00000527680 MRPL55Q7Z7F7 128 aaKnown RBP13.35□□□□□ -0.27
TRAPPC4-208ENST00000527680 RPL28P46779 137 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-208ENST00000527680 TP73-AS1Q9UF72 201 aa13.33□□□□□ -0.28
TRAPPC4-208ENST00000527680 TSPAN13O95857 204 aa13.32□□□□□ -0.28
TRAPPC4-208ENST00000527680 COX7B2Q8TF08 81 aa13.32□□□□□ -0.28
TRAPPC4-208ENST00000527680 RPL37AP8A6NKH3 93 aa13.31□□□□□ -0.28
TRAPPC4-208ENST00000527680 RAB5BP61020 215 aa13.31□□□□□ -0.28
TRAPPC4-208ENST00000527680 PDZD11Q5EBL8 140 aa13.31□□□□□ -0.28
TRAPPC4-208ENST00000527680 TINCRA0A1B0GVN0 87 aa13.3□□□□□ -0.28
TRAPPC4-208ENST00000527680 SMIM1B2RUZ4 78 aa13.3□□□□□ -0.28
TRAPPC4-208ENST00000527680 BCE1O60756 84 aa13.3□□□□□ -0.28
TRAPPC4-208ENST00000527680 ADCYAP1P18509 176 aa13.3□□□□□ -0.28
TRAPPC4-208ENST00000527680 LINC00167Q96N53 147 aa13.3□□□□□ -0.28
TRAPPC4-208ENST00000527680 GAGE10A6NGK3 116 aa13.28□□□□□ -0.28
TRAPPC4-208ENST00000527680 LINC01549A6NIU2 74 aa13.27□□□□□ -0.29
TRAPPC4-208ENST00000527680 CST9LQ9H4G1 147 aa13.27□□□□□ -0.29
TRAPPC4-208ENST00000527680 SPINK8P0C7L1 97 aa13.26□□□□□ -0.29
TRAPPC4-208ENST00000527680 CRYGAP11844 174 aa13.26□□□□□ -0.29
TRAPPC4-208ENST00000527680 TRAV9-1A0A075B6T8 112 aa13.25□□□□□ -0.29
TRAPPC4-208ENST00000527680 S100PP25815 95 aa13.25□□□□□ -0.29
TRAPPC4-208ENST00000527680 NKAPP1Q8N9T2 125 aa13.25□□□□□ -0.29
TRAPPC4-208ENST00000527680 TYMSOSQ8TAI1 123 aa13.25□□□□□ -0.29
TRAPPC4-208ENST00000527680 CLLU1Q5K131 121 aa13.24□□□□□ -0.29
TRAPPC4-208ENST00000527680 IGLV5-45A0A087WSX0 123 aa13.23□□□□□ -0.29
TRAPPC4-208ENST00000527680 A0A087X002 238 aa13.23□□□□□ -0.29
TRAPPC4-208ENST00000527680 PMVKQ15126 192 aa13.23□□□□□ -0.29
TRAPPC4-208ENST00000527680 FA2HQ7L5A8 372 aa13.23□□□□□ -0.29
TRAPPC4-208ENST00000527680 GNB1LQ9BYB4 327 aa13.23□□□□□ -0.29
TRAPPC4-208ENST00000527680 SMCO4Q9NRQ5 59 aa13.23□□□□□ -0.29
TRAPPC4-208ENST00000527680 H3BRM9 83 aa13.22□□□□□ -0.29
TRAPPC4-208ENST00000527680 UBE2AP49459 152 aa13.22□□□□□ -0.29
TRAPPC4-208ENST00000527680 MRPL18Q9H0U6 180 aaKnown RBP13.22□□□□□ -0.29
TRAPPC4-208ENST00000527680 TMEM218A2RU14 115 aa13.21□□□□□ -0.29
TRAPPC4-208ENST00000527680 ATP5LO75964 103 aa13.21□□□□□ -0.29
TRAPPC4-208ENST00000527680 UQCC3Q6UW78 93 aa13.2□□□□□ -0.3
TRAPPC4-208ENST00000527680 ANAPC11Q9NYG5 84 aa13.2□□□□□ -0.3
TRAPPC4-208ENST00000527680 LINC01546A6NGU7 62 aa13.19□□□□□ -0.3
TRAPPC4-208ENST00000527680 PFN2P35080 140 aa13.19□□□□□ -0.3
TRAPPC4-208ENST00000527680 NDUFA6P56556 154 aa13.19□□□□□ -0.3
TRAPPC4-208ENST00000527680 FABP9Q0Z7S8 132 aa13.19□□□□□ -0.3
TRAPPC4-208ENST00000527680 IGLV5-37A0A075B6J1 123 aa13.17□□□□□ -0.3
TRAPPC4-208ENST00000527680 COX19Q49B96 90 aa13.17□□□□□ -0.3
TRAPPC4-208ENST00000527680 IGKV2-28A0A075B6P5 120 aa13.16□□□□□ -0.3
TRAPPC4-208ENST00000527680 IGKV2D-28P01615 120 aa13.16□□□□□ -0.3
TRAPPC4-208ENST00000527680 SCO1O75880 301 aa13.15□□□□□ -0.3
TRAPPC4-208ENST00000527680 SEC11CQ9BY50 192 aa13.14□□□□□ -0.31
TRAPPC4-208ENST00000527680 IGLC3P0DOY3 106 aa13.11□□□□□ -0.31
TRAPPC4-208ENST00000527680 KRTAP13-1Q8IUC0 172 aa13.11□□□□□ -0.31
TRAPPC4-208ENST00000527680 FAM19A1Q7Z5A9 133 aa13.1□□□□□ -0.31
TRAPPC4-208ENST00000527680 IGKV2D-26A0A0A0MRZ7 120 aa13.09□□□□□ -0.31
TRAPPC4-208ENST00000527680 A0A0U1RQV1 116 aa13.09□□□□□ -0.31
TRAPPC4-208ENST00000527680 RPL24P83731 157 aaKnown RBP13.09□□□□□ -0.31
TRAPPC4-208ENST00000527680 FAM229BQ4G0N7 80 aa13.09□□□□□ -0.31
TRAPPC4-208ENST00000527680 KRTAP13-2Q52LG2 175 aa13.09□□□□□ -0.31
TRAPPC4-208ENST00000527680 ZNF625Q96I27 306 aaPredicted RBP13.09□□□□□ -0.31
TRAPPC4-208ENST00000527680 SND1-IT1Q9HBX3 110 aa13.09□□□□□ -0.31
TRAPPC4-208ENST00000527680 ERG28Q9UKR5 140 aa13.09□□□□□ -0.31
TRAPPC4-208ENST00000527680 IGLV5-39A0A0G2JS06 123 aa13.08□□□□□ -0.32
TRAPPC4-208ENST00000527680 PRLHP81277 87 aa13.08□□□□□ -0.32
TRAPPC4-208ENST00000527680 RPS10P5Q9NQ39 176 aa13.08□□□□□ -0.32
TRAPPC4-208ENST00000527680 LINC00614P0C842 121 aa13.07□□□□□ -0.32
TRAPPC4-208ENST00000527680 ZNF22P17026 224 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC4-208ENST00000527680 LINC00304Q8N9R0 145 aa13.07□□□□□ -0.32
TRAPPC4-208ENST00000527680 TMEM238C9JI98 176 aa13.06□□□□□ -0.32
TRAPPC4-208ENST00000527680 VPREB1P12018 145 aa13.06□□□□□ -0.32
TRAPPC4-208ENST00000527680 COX17Q14061 63 aa13.06□□□□□ -0.32
TRAPPC4-208ENST00000527680 RETNLBQ9BQ08 111 aa13.06□□□□□ -0.32
TRAPPC4-208ENST00000527680 TMEM126AQ9H061 195 aa13.06□□□□□ -0.32
TRAPPC4-208ENST00000527680 TRAPPC1Q9Y5R8 145 aa13.05□□□□□ -0.32
TRAPPC4-208ENST00000527680 MUC2Q02817 5179 aa13.04□□□□□ -0.32
TRAPPC4-208ENST00000527680 HBDP02042 147 aa13.04□□□□□ -0.32
TRAPPC4-208ENST00000527680 IFITM2Q01629 132 aa13.04□□□□□ -0.32
TRAPPC4-208ENST00000527680 TMEM170BQ5T4T1 132 aa13.04□□□□□ -0.32
TRAPPC4-208ENST00000527680 COMMD7Q86VX2 200 aa13.04□□□□□ -0.32
TRAPPC4-208ENST00000527680 BAGE3Q86Y29 109 aa13.04□□□□□ -0.32
TRAPPC4-208ENST00000527680 A0A096LNJ9 63 aa13.03□□□□□ -0.32
TRAPPC4-208ENST00000527680 PMCHL1Q16048 86 aa13.03□□□□□ -0.32
TRAPPC4-208ENST00000527680 RHEBQ15382 184 aa13.02□□□□□ -0.33
TRAPPC4-208ENST00000527680 C18orf32Q8TCD1 76 aa13.02□□□□□ -0.33
TRAPPC4-208ENST00000527680 CBLN2Q8IUK8 224 aa13.01□□□□□ -0.33
TRAPPC4-208ENST00000527680 C11orf86A6NJI1 115 aa13□□□□□ -0.33
TRAPPC4-208ENST00000527680 LINC00158P58513 81 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms