RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 TRBV6-5A0A0K0K1A5 114 aa7.91□□□□□ -1.14
CAPN1-204ENST00000526468 TRBV30A0A0K0K1B3 111 aa7.91□□□□□ -1.14
CAPN1-204ENST00000526468 M0R2P5 195 aa7.91□□□□□ -1.14
CAPN1-204ENST00000526468 VCYO14598 125 aa7.91□□□□□ -1.14
CAPN1-204ENST00000526468 S100A4P26447 101 aaKnown RBP7.91□□□□□ -1.14
CAPN1-204ENST00000526468 FAM159AQ6UWV7 190 aa7.91□□□□□ -1.14
CAPN1-204ENST00000526468 ANKRD29Q8N6D5 301 aa7.91□□□□□ -1.14
CAPN1-204ENST00000526468 PHLDA3Q9Y5J5 127 aa7.91□□□□□ -1.14
CAPN1-204ENST00000526468 TRAV4A0A0B4J268 109 aa7.9□□□□□ -1.14
CAPN1-204ENST00000526468 IGKV3D-20A0A0C4DH25 116 aa7.9□□□□□ -1.14
CAPN1-204ENST00000526468 FAM229AH3BQW9 127 aa7.9□□□□□ -1.14
CAPN1-204ENST00000526468 IGHV3-30P01768 117 aa7.9□□□□□ -1.14
CAPN1-204ENST00000526468 MT-ATP8P03928 68 aa7.9□□□□□ -1.14
CAPN1-204ENST00000526468 IGHV3-30-5P0DP03 117 aa7.9□□□□□ -1.14
CAPN1-204ENST00000526468 NDUFV3P56181 108 aaKnown RBP7.9□□□□□ -1.14
CAPN1-204ENST00000526468 TMEM170BQ5T4T1 132 aa7.9□□□□□ -1.14
CAPN1-204ENST00000526468 PPDPFQ9H3Y8 114 aa7.9□□□□□ -1.14
CAPN1-204ENST00000526468 Q9HAA7 133 aa7.9□□□□□ -1.14
CAPN1-204ENST00000526468 TRAV8-4A0A0B4J246 113 aa7.89□□□□□ -1.15
CAPN1-204ENST00000526468 TRBV10-2A0A0K0K1G8 114 aa7.89□□□□□ -1.15
CAPN1-204ENST00000526468 LOC100131303A0A0U1RQF7 123 aa7.89□□□□□ -1.15
CAPN1-204ENST00000526468 LEPROTO15243 131 aa7.89□□□□□ -1.15
CAPN1-204ENST00000526468 CFC1BP0CG36 223 aa7.89□□□□□ -1.15
CAPN1-204ENST00000526468 CFC1P0CG37 223 aa7.89□□□□□ -1.15
CAPN1-204ENST00000526468 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
CAPN1-204ENST00000526468 NTN5Q8WTR8 489 aaPredicted RBP7.89□□□□□ -1.15
CAPN1-204ENST00000526468 RASL10AQ92737 203 aa7.89□□□□□ -1.15
CAPN1-204ENST00000526468 SPXQ9BT56 116 aa7.89□□□□□ -1.15
CAPN1-204ENST00000526468 IGHV3-16A0A0C4DH30 117 aa7.88□□□□□ -1.15
CAPN1-204ENST00000526468 IGHV3-38A0A0C4DH36 116 aa7.88□□□□□ -1.15
CAPN1-204ENST00000526468 A0A0J9YXY3 114 aa7.88□□□□□ -1.15
CAPN1-204ENST00000526468 TCL1BO95988 128 aa7.88□□□□□ -1.15
CAPN1-204ENST00000526468 UBE2WQ96B02 151 aa7.88□□□□□ -1.15
CAPN1-204ENST00000526468 TMEM101Q96IK0 257 aa7.88□□□□□ -1.15
CAPN1-204ENST00000526468 J3QL48 77 aa7.87□□□□□ -1.15
CAPN1-204ENST00000526468 J3QQQ9 107 aa7.87□□□□□ -1.15
CAPN1-204ENST00000526468 TIMM17BO60830 172 aa7.87□□□□□ -1.15
CAPN1-204ENST00000526468 ZNF876PQ49A33 203 aa7.87□□□□□ -1.15
CAPN1-204ENST00000526468 LINC01556Q5JQF7 62 aa7.87□□□□□ -1.15
CAPN1-204ENST00000526468 TTTY13Q9BZ97 58 aa7.87□□□□□ -1.15
CAPN1-204ENST00000526468 TRBV27A0A0K0K1C4 114 aa7.86□□□□□ -1.15
CAPN1-204ENST00000526468 TRBV7-7A0A0K0K1E9 115 aa7.86□□□□□ -1.15
CAPN1-204ENST00000526468 H3BVH4 76 aa7.86□□□□□ -1.15
CAPN1-204ENST00000526468 LINC01620Q4KN68 170 aa7.86□□□□□ -1.15
CAPN1-204ENST00000526468 Q8N814 137 aa7.86□□□□□ -1.15
CAPN1-204ENST00000526468 CARD19Q96LW7 228 aa7.86□□□□□ -1.15
CAPN1-204ENST00000526468 LRCOL1A6NCL2 159 aa7.85□□□□□ -1.15
CAPN1-204ENST00000526468 IGIPA6NJ69 53 aa7.85□□□□□ -1.15
CAPN1-204ENST00000526468 C9JAW5 83 aa7.85□□□□□ -1.15
CAPN1-204ENST00000526468 IGHV3-33P01772 117 aa7.85□□□□□ -1.15
CAPN1-204ENST00000526468 IGHV3-30-3P0DP02 117 aa7.85□□□□□ -1.15
CAPN1-204ENST00000526468 GATA1P15976 413 aaPredicted RBP7.85□□□□□ -1.15
CAPN1-204ENST00000526468 IGLV4-69A0A075B6H9 119 aa7.84□□□□□ -1.15
CAPN1-204ENST00000526468 GNRH2O43555 120 aa7.84□□□□□ -1.15
CAPN1-204ENST00000526468 TIRAPP58753 221 aa7.84□□□□□ -1.15
CAPN1-204ENST00000526468 IBA57-AS1B1ANH7 110 aa7.83□□□□□ -1.16
CAPN1-204ENST00000526468 POLR2KP53803 58 aaKnown RBP7.83□□□□□ -1.16
CAPN1-204ENST00000526468 Q1RN00 199 aa7.83□□□□□ -1.16
CAPN1-204ENST00000526468 ZFP2Q6ZN57 461 aa7.83□□□□□ -1.16
CAPN1-204ENST00000526468 IGHV3-73A0A0B4J1V6 119 aa7.82□□□□□ -1.16
CAPN1-204ENST00000526468 PIK3CD-AS1Q5SR53 167 aa7.82□□□□□ -1.16
CAPN1-204ENST00000526468 PYGO1Q9Y3Y4 419 aa7.82□□□□□ -1.16
CAPN1-204ENST00000526468 TMEM223A0PJW6 202 aa7.81□□□□□ -1.16
CAPN1-204ENST00000526468 PLA2G1BP04054 148 aaKnown RBP7.81□□□□□ -1.16
CAPN1-204ENST00000526468 MGPP08493 103 aa7.81□□□□□ -1.16
CAPN1-204ENST00000526468 CXCL5P42830 114 aa7.81□□□□□ -1.16
CAPN1-204ENST00000526468 LELP1Q5T871 98 aa7.81□□□□□ -1.16
CAPN1-204ENST00000526468 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
CAPN1-204ENST00000526468 FAM30AQ9NZY2 134 aa7.81□□□□□ -1.16
CAPN1-204ENST00000526468 B5MCH6 92 aa7.8□□□□□ -1.16
CAPN1-204ENST00000526468 LECT2O14960 151 aa7.8□□□□□ -1.16
CAPN1-204ENST00000526468 C2orf82Q6UX34 121 aa7.8□□□□□ -1.16
CAPN1-204ENST00000526468 Q8N3U1 123 aa7.8□□□□□ -1.16
CAPN1-204ENST00000526468 C11orf21Q9P2W6 132 aa7.8□□□□□ -1.16
CAPN1-204ENST00000526468 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.79□□□□□ -1.16
CAPN1-204ENST00000526468 TRBV6-4A0A1B0GX49 114 aa7.79□□□□□ -1.16
CAPN1-204ENST00000526468 A4D1N5 150 aa7.79□□□□□ -1.16
CAPN1-204ENST00000526468 RS1O15537 224 aa7.79□□□□□ -1.16
CAPN1-204ENST00000526468 SS18L2Q9UHA2 77 aa7.79□□□□□ -1.16
CAPN1-204ENST00000526468 TRAV26-2A0A0B4J265 109 aa7.78□□□□□ -1.16
CAPN1-204ENST00000526468 A0A1B0GX51 115 aa7.78□□□□□ -1.16
CAPN1-204ENST00000526468 GAS8-AS1O95177 125 aa7.78□□□□□ -1.16
CAPN1-204ENST00000526468 CIRBPQ14011 172 aaKnown RBP7.78□□□□□ -1.16
CAPN1-204ENST00000526468 LINC00643Q86TS7 51 aa7.78□□□□□ -1.16
CAPN1-204ENST00000526468 AMELXQ99217 191 aa7.78□□□□□ -1.16
CAPN1-204ENST00000526468 LST1O00453 97 aa7.77□□□□□ -1.17
CAPN1-204ENST00000526468 UQCRQO14949 82 aa7.77□□□□□ -1.17
CAPN1-204ENST00000526468 ZNF22P17026 224 aaPredicted RBP7.77□□□□□ -1.17
CAPN1-204ENST00000526468 MIAQ16674 131 aa7.77□□□□□ -1.17
CAPN1-204ENST00000526468 Q6ZSA8 131 aa7.77□□□□□ -1.17
CAPN1-204ENST00000526468 C14orf178Q8N769 122 aaPredicted RBP7.77□□□□□ -1.17
CAPN1-204ENST00000526468 C9orf85Q96MD7 179 aa7.77□□□□□ -1.17
CAPN1-204ENST00000526468 TIMM21Q9BVV7 248 aa7.77□□□□□ -1.17
CAPN1-204ENST00000526468 KIF25-AS1Q9Y6Z4 181 aa7.77□□□□□ -1.17
CAPN1-204ENST00000526468 LRP1Q07954 4544 aaKnown RBP7.76□□□□□ -1.17
CAPN1-204ENST00000526468 I3L3M4 83 aa7.76□□□□□ -1.17
CAPN1-204ENST00000526468 DAND5Q8N907 189 aa7.76□□□□□ -1.17
CAPN1-204ENST00000526468 TRAV8-3A0A0A6YYJ7 113 aa7.75□□□□□ -1.17
CAPN1-204ENST00000526468 MRPS36P82909 103 aaKnown RBP7.75□□□□□ -1.17
CAPN1-204ENST00000526468 SUMO4Q6EEV6 95 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms