RNA–Protein interactions for RNA: ENST00000526313.5

USH1C-204, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best)

Gene USH1C, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-204ENST00000526313 ANGP03950 147 aaKnown RBP10.88□□□□□ -0.67
USH1C-204ENST00000526313 BAHCC1Q9P281 2608 aa10.88□□□□□ -0.67
USH1C-204ENST00000526313 J3QR89 54 aa10.87□□□□□ -0.67
USH1C-204ENST00000526313 RPL13AP40429 203 aaKnown RBP10.87□□□□□ -0.67
USH1C-204ENST00000526313 CHCHD10Q8WYQ3 142 aaPredicted RBP10.87□□□□□ -0.67
USH1C-204ENST00000526313 MIR7-3HGQ8N6C7 128 aa10.87□□□□□ -0.67
USH1C-204ENST00000526313 PRR34Q9NV39 138 aa10.87□□□□□ -0.67
USH1C-204ENST00000526313 C6orf226Q5I0X4 101 aa10.86□□□□□ -0.67
USH1C-204ENST00000526313 LINC01600Q96MT4 127 aa10.86□□□□□ -0.67
USH1C-204ENST00000526313 M0QXV9 152 aa10.85□□□□□ -0.67
USH1C-204ENST00000526313 KIAA0087Q14695 138 aa10.85□□□□□ -0.67
USH1C-204ENST00000526313 COX7A2LO14548 114 aa10.85□□□□□ -0.67
USH1C-204ENST00000526313 ATXN8Q156A1 80 aa10.85□□□□□ -0.67
USH1C-204ENST00000526313 Q6ZTC4 211 aa10.84□□□□□ -0.67
USH1C-204ENST00000526313 FOXI1Q12951 378 aa10.84□□□□□ -0.67
USH1C-204ENST00000526313 KPRPQ5T749 579 aaPredicted RBP10.84□□□□□ -0.67
USH1C-204ENST00000526313 COX6CP09669 75 aa10.83□□□□□ -0.68
USH1C-204ENST00000526313 LINC00158P58513 81 aa10.83□□□□□ -0.68
USH1C-204ENST00000526313 LINC01620Q4KN68 170 aa10.82□□□□□ -0.68
USH1C-204ENST00000526313 COL6A5A8TX70 2615 aa10.81□□□□□ -0.68
USH1C-204ENST00000526313 IGLV10-54A0A075B6I4 117 aa10.81□□□□□ -0.68
USH1C-204ENST00000526313 A0A0J9YWU9 116 aa10.81□□□□□ -0.68
USH1C-204ENST00000526313 CCL18P55774 89 aa10.81□□□□□ -0.68
USH1C-204ENST00000526313 CXCL5P42830 114 aa10.81□□□□□ -0.68
USH1C-204ENST00000526313 ENHOQ6UWT2 76 aa10.81□□□□□ -0.68
USH1C-204ENST00000526313 IGKV2-28A0A075B6P5 120 aa10.8□□□□□ -0.68
USH1C-204ENST00000526313 C9JAW5 83 aa10.8□□□□□ -0.68
USH1C-204ENST00000526313 SLC25A20O43772 301 aa10.8□□□□□ -0.68
USH1C-204ENST00000526313 IGKV2D-28P01615 120 aa10.8□□□□□ -0.68
USH1C-204ENST00000526313 TEN1Q86WV5 123 aa10.8□□□□□ -0.68
USH1C-204ENST00000526313 SND1-IT1Q9HBX3 110 aa10.8□□□□□ -0.68
USH1C-204ENST00000526313 LST1O00453 97 aa10.79□□□□□ -0.68
USH1C-204ENST00000526313 C2orf82Q6UX34 121 aa10.79□□□□□ -0.68
USH1C-204ENST00000526313 KLK12Q9UKR0 248 aa10.79□□□□□ -0.68
USH1C-204ENST00000526313 KLK5Q9Y337 293 aaPredicted RBP10.79□□□□□ -0.68
USH1C-204ENST00000526313 TENM3Q9P273 2699 aa10.79□□□□□ -0.68
USH1C-204ENST00000526313 TRAV13-2A0A0B4J235 113 aa10.79□□□□□ -0.68
USH1C-204ENST00000526313 GAGE12HA6NDE8 117 aa10.79□□□□□ -0.68
USH1C-204ENST00000526313 SIGMAR1Q99720 223 aa10.79□□□□□ -0.68
USH1C-204ENST00000526313 PFN2P35080 140 aa10.78□□□□□ -0.68
USH1C-204ENST00000526313 MALP21145 153 aa10.78□□□□□ -0.68
USH1C-204ENST00000526313 NANOS2P60321 138 aaKnown RBP10.78□□□□□ -0.68
USH1C-204ENST00000526313 CKS1BP61024 79 aa10.78□□□□□ -0.68
USH1C-204ENST00000526313 LINC00337Q8N6G1 96 aa10.78□□□□□ -0.68
USH1C-204ENST00000526313 C11orf45Q8TAV5 145 aa10.78□□□□□ -0.68
USH1C-204ENST00000526313 TRBV10-2A0A0K0K1G8 114 aa10.77□□□□□ -0.69
USH1C-204ENST00000526313 COX17Q14061 63 aa10.77□□□□□ -0.69
USH1C-204ENST00000526313 TRAV8-4A0A0B4J246 113 aa10.76□□□□□ -0.69
USH1C-204ENST00000526313 CFAP161Q6P656 301 aa10.76□□□□□ -0.69
USH1C-204ENST00000526313 ANKRD29Q8N6D5 301 aa10.76□□□□□ -0.69
USH1C-204ENST00000526313 CLEC2BQ92478 149 aa10.76□□□□□ -0.69
USH1C-204ENST00000526313 CARD19Q96LW7 228 aa10.76□□□□□ -0.69
USH1C-204ENST00000526313 WFDC10BQ8IUB3 73 aa10.76□□□□□ -0.69
USH1C-204ENST00000526313 PPDPFLQ8WWR9 84 aa10.76□□□□□ -0.69
USH1C-204ENST00000526313 SPATA25Q9BR10 227 aa10.76□□□□□ -0.69
USH1C-204ENST00000526313 TM2D3Q9BRN9 247 aa10.76□□□□□ -0.69
USH1C-204ENST00000526313 DEFB131BA0A096LNP1 70 aa10.75□□□□□ -0.69
USH1C-204ENST00000526313 RPL28P46779 137 aaKnown RBP10.75□□□□□ -0.69
USH1C-204ENST00000526313 ESRGQ1W209 222 aa10.75□□□□□ -0.69
USH1C-204ENST00000526313 K7EIL1 84 aa10.74□□□□□ -0.69
USH1C-204ENST00000526313 CRPP02741 224 aa10.74□□□□□ -0.69
USH1C-204ENST00000526313 SCGB1A1P11684 91 aa10.74□□□□□ -0.69
USH1C-204ENST00000526313 NOTCH1P46531 2555 aa10.74□□□□□ -0.69
USH1C-204ENST00000526313 KRTAP26-1Q6PEX3 210 aa10.72□□□□□ -0.69
USH1C-204ENST00000526313 H3BT86 120 aa10.72□□□□□ -0.69
USH1C-204ENST00000526313 UBE2WQ96B02 151 aa10.72□□□□□ -0.69
USH1C-204ENST00000526313 NBEAL1Q6ZS30 2694 aa10.71□□□□□ -0.7
USH1C-204ENST00000526313 PRB2P02812 416 aaPredicted RBP10.7□□□□□ -0.7
USH1C-204ENST00000526313 SPAG11BQ08648 103 aa10.7□□□□□ -0.7
USH1C-204ENST00000526313 MUC7Q8TAX7 377 aa10.7□□□□□ -0.7
USH1C-204ENST00000526313 NDUFC2O95298 119 aa10.7□□□□□ -0.7
USH1C-204ENST00000526313 LINC01556Q5JQF7 62 aa10.69□□□□□ -0.7
USH1C-204ENST00000526313 C10orf25Q5T742 122 aa10.69□□□□□ -0.7
USH1C-204ENST00000526313 C6orf223Q8N319 242 aa10.69□□□□□ -0.7
USH1C-204ENST00000526313 GVQW2A0A096LPI5 108 aaPredicted RBP10.69□□□□□ -0.7
USH1C-204ENST00000526313 TRACP01848 142 aa10.69□□□□□ -0.7
USH1C-204ENST00000526313 C9orf116Q5BN46 136 aaPredicted RBP10.69□□□□□ -0.7
USH1C-204ENST00000526313 UNQ6190/PRO20217Q6UXQ8 127 aa10.69□□□□□ -0.7
USH1C-204ENST00000526313 SMIM11BQ8TCY0 68 aa10.69□□□□□ -0.7
USH1C-204ENST00000526313 HUWE1Q7Z6Z7 4374 aaKnown RBP10.68□□□□□ -0.7
USH1C-204ENST00000526313 TRAV10A0A0B4J240 114 aa10.67□□□□□ -0.7
USH1C-204ENST00000526313 NTN5Q8WTR8 489 aaPredicted RBP10.67□□□□□ -0.7
USH1C-204ENST00000526313 FAM218AQ96MZ4 157 aa10.66□□□□□ -0.7
USH1C-204ENST00000526313 C15orf53Q8NAA6 179 aa10.66□□□□□ -0.7
USH1C-204ENST00000526313 DNAH10OSP0CZ25 163 aa10.64□□□□□ -0.71
USH1C-204ENST00000526313 DEFB121Q5J5C9 76 aa10.64□□□□□ -0.71
USH1C-204ENST00000526313 LINC00526Q96FQ7 95 aa10.64□□□□□ -0.71
USH1C-204ENST00000526313 H0YGX0 51 aa10.64□□□□□ -0.71
USH1C-204ENST00000526313 CDIP1Q9H305 208 aa10.63□□□□□ -0.71
USH1C-204ENST00000526313 TEX49A0A1B0GTD5 131 aa10.63□□□□□ -0.71
USH1C-204ENST00000526313 MRAPQ8TCY5 172 aa10.63□□□□□ -0.71
USH1C-204ENST00000526313 C6orf48Q9UBA6 75 aa10.62□□□□□ -0.71
USH1C-204ENST00000526313 PRR3P79522 188 aaKnown RBP10.61□□□□□ -0.71
USH1C-204ENST00000526313 Q8NDZ9 215 aa10.61□□□□□ -0.71
USH1C-204ENST00000526313 OR13C6PQ8NH95 151 aa10.61□□□□□ -0.71
USH1C-204ENST00000526313 C15orf56Q8N910 161 aa10.61□□□□□ -0.71
USH1C-204ENST00000526313 MDFIQ99750 246 aa10.6□□□□□ -0.71
USH1C-204ENST00000526313 TMEM126AQ9H061 195 aa10.6□□□□□ -0.71
USH1C-204ENST00000526313 MGAM2Q2M2H8 2515 aa10.59□□□□□ -0.71
USH1C-204ENST00000526313 A0A1B0GV72 72 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms