RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 MRPL33O75394 65 aaKnown RBP1.6□□□□□ -2.15
CSDE1-211ENST00000525970 TCRAP04437 139 aa1.6□□□□□ -2.15
CSDE1-211ENST00000525970 ARMS2P0C7Q2 107 aa1.6□□□□□ -2.15
CSDE1-211ENST00000525970 UNC13CQ8NB66 2214 aa1.6□□□□□ -2.15
CSDE1-211ENST00000525970 EML5Q05BV3 1969 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 IGKV3-7A0A075B6H7 116 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.59□□□□□ -2.15
CSDE1-211ENST00000525970 RBAKDNA6NC62 111 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 OOSP1A8MZH6 123 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 ATOX1O00244 68 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 MGPP08493 103 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 IGLC6P0CF74 106 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 COX7CP15954 63 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 PRCDQ00LT1 54 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 MIR22HGQ0VDD5 57 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 KRTAP21-3Q3LHN1 58 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 RPL39P5Q59GN2 51 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 COPS9Q8WXC6 57 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 MRPL35Q9NZE8 188 aaKnown RBP1.59□□□□□ -2.15
CSDE1-211ENST00000525970 PRO1854Q9UHT4 67 aa1.59□□□□□ -2.15
CSDE1-211ENST00000525970 CACNA1CQ13936 2221 aa1.59□□□□□ -2.16
CSDE1-211ENST00000525970 TRBV7-3A0A075B6L6 115 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 IGKV2-40A0A087WW87 121 aaPredicted RBP1.58□□□□□ -2.16
CSDE1-211ENST00000525970 F8VRH5 84 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 M0R2P5 195 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 DNAL4O96015 105 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 IGKV2D-40P01614 121 aaPredicted RBP1.58□□□□□ -2.16
CSDE1-211ENST00000525970 ACYP1P07311 99 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 NPC2P61916 151 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 BLCAPP62952 87 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 DEFB133Q30KQ1 61 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 SPRNQ5BIV9 151 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 SPANXN1Q5VSR9 72 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 Q8N8P6 123 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 LEAP2Q969E1 77 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 TRGV9Q99603 122 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 DYNLRB1Q9NP97 96 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 COL4A6Q14031 1691 aa1.58□□□□□ -2.16
CSDE1-211ENST00000525970 CACNA1BQ00975 2339 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 RP1L1Q8IWN7 2480 aaPredicted RBP1.57□□□□□ -2.16
CSDE1-211ENST00000525970 IGLV3-32A0A0A0MS00 114 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 TRAV12-3A0A0B4J271 114 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 TEX49A0A1B0GTD5 131 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 hADV29S1A0JD25 119 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 IGHV3-33P01772 117 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 TFF1P04155 84 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 SAA2P0DJI9 122 aaPredicted RBP1.57□□□□□ -2.16
CSDE1-211ENST00000525970 APELAP0DMC3 54 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 PRB4P10163 310 aaPredicted RBP1.57□□□□□ -2.16
CSDE1-211ENST00000525970 EFNA4P52798 201 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 UBE2D3P61077 147 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 UBE2D2P62837 147 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 LINC00322Q6ZN03 302 aaPredicted RBP1.57□□□□□ -2.16
CSDE1-211ENST00000525970 LINC00643Q86TS7 51 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 NDUFA11Q86Y39 141 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 C10orf105Q8TEF2 133 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 LINC00526Q96FQ7 95 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 FAM167A-AS1Q96KT0 104 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 DSCR8Q96T75 97 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 TMEM14BQ9NUH8 114 aa1.57□□□□□ -2.16
CSDE1-211ENST00000525970 SNRNP200O75643 2136 aaKnown RBP1.57□□□□□ -2.16
CSDE1-211ENST00000525970 TRBV6-1A0A0K0K1D8 114 aa1.56□□□□□ -2.16
CSDE1-211ENST00000525970 TRBV7-7A0A0K0K1E9 115 aa1.56□□□□□ -2.16
CSDE1-211ENST00000525970 PPP1R17O96001 155 aa1.56□□□□□ -2.16
CSDE1-211ENST00000525970 UBE2D1P51668 147 aa1.56□□□□□ -2.16
CSDE1-211ENST00000525970 ASB16-AS1Q495Z4 193 aa1.56□□□□□ -2.16
CSDE1-211ENST00000525970 SBSPONQ8IVN8 264 aa1.56□□□□□ -2.16
CSDE1-211ENST00000525970 OBSCN-AS1Q96MR7 158 aa1.56□□□□□ -2.16
CSDE1-211ENST00000525970 ODF3Q96PU9 254 aa1.56□□□□□ -2.16
CSDE1-211ENST00000525970 PROK2Q9HC23 129 aa1.56□□□□□ -2.16
CSDE1-211ENST00000525970 TMEM14CQ9P0S9 112 aa1.56□□□□□ -2.16
CSDE1-211ENST00000525970 MED13Q9UHV7 2174 aa1.56□□□□□ -2.16
CSDE1-211ENST00000525970 MUC22E2RYF6 1773 aaPredicted RBP1.55□□□□□ -2.16
CSDE1-211ENST00000525970 TRAV17A0A0B4J275 112 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 A0A0J9YY99 117 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 SPTY2D1-AS1A0A0U1RR47 76 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 IGKV2-29A2NJV5 120 aaPredicted RBP1.55□□□□□ -2.16
CSDE1-211ENST00000525970 IQCF6A8MYZ5 107 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 IGHV3-30P01768 117 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 IGHV3-30-5P0DP03 117 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 CCL8P80075 99 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 RBM3P98179 157 aaKnown RBP1.55□□□□□ -2.16
CSDE1-211ENST00000525970 S100A7L2Q5SY68 101 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 MUSTN1Q8IVN3 82 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 SERP2Q8N6R1 65 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 DEFB108BQ8NET1 73 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 DPH3Q96FX2 82 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 TMEM141Q96I45 108 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 SMIM2Q9BVW6 85 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 AGPAT4-IT1Q9H0P7 198 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 NCOA6Q14686 2063 aaPredicted RBP1.55□□□□□ -2.16
CSDE1-211ENST00000525970 GOLGA4Q13439 2230 aaKnown RBP1.55□□□□□ -2.16
CSDE1-211ENST00000525970 OTOGLQ3ZCN5 2332 aa1.55□□□□□ -2.16
CSDE1-211ENST00000525970 TRBV7-1A0A0A6YYK4 115 aa1.54□□□□□ -2.16
CSDE1-211ENST00000525970 TRAV21A0A0B4J279 112 aa1.54□□□□□ -2.16
CSDE1-211ENST00000525970 TRBV30A0A0K0K1B3 111 aa1.54□□□□□ -2.16
CSDE1-211ENST00000525970 A6NN06 94 aa1.54□□□□□ -2.16
CSDE1-211ENST00000525970 M0R1W7 72 aa1.54□□□□□ -2.16
CSDE1-211ENST00000525970 RHOHQ15669 191 aa1.54□□□□□ -2.16
CSDE1-211ENST00000525970 CASC2Q6XLA1 102 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms