RNA–Protein interactions for RNA: ENST00000525962.5

TGFBR3-207, Transcript of transforming growth factor beta receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TGFBR3, Length 3,927 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-207ENST00000525962 SMIM1B2RUZ4 78 aa5□□□□□ -1.61
TGFBR3-207ENST00000525962 LINC01546A6NGU7 62 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 CCL18P55774 89 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 SPAG11BQ08648 103 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 SOSTDC1Q6X4U4 206 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 UPK3BQ9BT76 320 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 HRNRQ86YZ3 2850 aaPredicted RBP4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 IGKV2D-24A0A075B6R9 120 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 CMC4P56277 68 aaPredicted RBP4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 FAM218AQ96MZ4 157 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 ZNF702PQ9H963 129 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 A0A0U1RQV1 116 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 ODF3L2Q3SX64 289 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 MPLKIPQ8TAP9 179 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 C16orf74Q96GX8 76 aa4.99□□□□□ -1.61
TGFBR3-207ENST00000525962 J3QLI3 93 aa4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 HILS1P60008 231 aa4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 NKAPP1Q8N9T2 125 aa4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 CAMK2N2Q96S95 79 aa4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 AMELXQ99217 191 aa4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 PKIGQ9Y2B9 76 aa4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 UNC79Q9P2D8 2635 aa4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 TRBV10-1A0A0K0K1A3 114 aa4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 TMEM89A2RUT3 159 aa4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 DEFB121Q5J5C9 76 aa4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 NHLRC4P0CG21 123 aaPredicted RBP4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 HRCT1Q6UXD1 115 aa4.98□□□□□ -1.61
TGFBR3-207ENST00000525962 LINC00337Q8N6G1 96 aa4.97□□□□□ -1.61
TGFBR3-207ENST00000525962 COX7CP15954 63 aa4.97□□□□□ -1.61
TGFBR3-207ENST00000525962 SEC61GP60059 68 aa4.97□□□□□ -1.61
TGFBR3-207ENST00000525962 FAM222AQ5U5X8 452 aa4.97□□□□□ -1.61
TGFBR3-207ENST00000525962 C1orf158Q8N1D5 194 aa4.97□□□□□ -1.61
TGFBR3-207ENST00000525962 BBC3Q96PG8 261 aaPredicted RBP4.97□□□□□ -1.61
TGFBR3-207ENST00000525962 CDC42SE2Q9NRR3 84 aa4.97□□□□□ -1.61
TGFBR3-207ENST00000525962 TRBV6-8A0A0A6YYG3 113 aa4.97□□□□□ -1.61
TGFBR3-207ENST00000525962 TEP1Q99973 2627 aaKnown RBP4.97□□□□□ -1.61
TGFBR3-207ENST00000525962 JMJD7-PLA2G4BH0Y9G9 81 aa4.96□□□□□ -1.61
TGFBR3-207ENST00000525962 TMEM256-PLSCR3K7ERE1 68 aa4.96□□□□□ -1.61
TGFBR3-207ENST00000525962 NTM-AS1Q6ZSK4 140 aa4.96□□□□□ -1.61
TGFBR3-207ENST00000525962 BRK1Q8WUW1 75 aa4.96□□□□□ -1.61
TGFBR3-207ENST00000525962 DNAJC9-AS1A6NH13 148 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 F8WDY8 70 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 RPS28P62857 69 aaKnown RBP4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 PRR4Q16378 134 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 NREPQ16612 68 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 DEFB113Q30KQ7 82 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 Q6ZQY7 126 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 FAM19A1Q7Z5A9 133 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 CHCHD10Q8WYQ3 142 aaPredicted RBP4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 IMUPQ9GZP8 106 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 MAST4O15021 2626 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 NBEAL1Q6ZS30 2694 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 IGHV4-31P0DP07 118 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 Q6YL49 198 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 LINC00846Q9NV44 126 aa4.96□□□□□ -1.62
TGFBR3-207ENST00000525962 REG3AQ06141 175 aa4.95□□□□□ -1.62
TGFBR3-207ENST00000525962 Q8N3U1 123 aa4.95□□□□□ -1.62
TGFBR3-207ENST00000525962 C4orf3Q8WVX3 66 aa4.95□□□□□ -1.62
TGFBR3-207ENST00000525962 FAM19A4Q96LR4 140 aa4.95□□□□□ -1.62
TGFBR3-207ENST00000525962 LRCOL1A6NCL2 159 aa4.95□□□□□ -1.62
TGFBR3-207ENST00000525962 C3orf84H3BNL1 204 aa4.95□□□□□ -1.62
TGFBR3-207ENST00000525962 TMEM258P61165 79 aa4.95□□□□□ -1.62
TGFBR3-207ENST00000525962 PRO0255Q9UI72 69 aa4.95□□□□□ -1.62
TGFBR3-207ENST00000525962 SERP2Q8N6R1 65 aa4.94□□□□□ -1.62
TGFBR3-207ENST00000525962 SMR3AQ99954 134 aa4.94□□□□□ -1.62
TGFBR3-207ENST00000525962 IBA57-AS1B1ANH7 110 aa4.94□□□□□ -1.62
TGFBR3-207ENST00000525962 NDUFC2O95298 119 aa4.94□□□□□ -1.62
TGFBR3-207ENST00000525962 LITAFQ99732 161 aa4.94□□□□□ -1.62
TGFBR3-207ENST00000525962 A0A096LNI7 61 aa4.94□□□□□ -1.62
TGFBR3-207ENST00000525962 LINC00959A0A1B0GUT2 108 aa4.94□□□□□ -1.62
TGFBR3-207ENST00000525962 TIMM17BO60830 172 aa4.94□□□□□ -1.62
TGFBR3-207ENST00000525962 UBE2BP63146 152 aa4.94□□□□□ -1.62
TGFBR3-207ENST00000525962 KIR2DL5BQ8NHK3 375 aa4.94□□□□□ -1.62
TGFBR3-207ENST00000525962 SMCR5Q8TEV8 140 aa4.94□□□□□ -1.62
TGFBR3-207ENST00000525962 F8WEM9 126 aa4.93□□□□□ -1.62
TGFBR3-207ENST00000525962 PRO0628Q9UI54 55 aa4.93□□□□□ -1.62
TGFBR3-207ENST00000525962 IGSF10Q6WRI0 2623 aa4.93□□□□□ -1.62
TGFBR3-207ENST00000525962 VPS13CQ709C8 3753 aa4.93□□□□□ -1.62
TGFBR3-207ENST00000525962 C6orf223Q8N319 242 aa4.93□□□□□ -1.62
TGFBR3-207ENST00000525962 DIRC1Q969H9 104 aa4.93□□□□□ -1.62
TGFBR3-207ENST00000525962 UNQ6190/PRO20217Q6UXQ8 127 aa4.93□□□□□ -1.62
TGFBR3-207ENST00000525962 NOTCH1P46531 2555 aa4.92□□□□□ -1.62
TGFBR3-207ENST00000525962 PSCAO43653 123 aa4.92□□□□□ -1.62
TGFBR3-207ENST00000525962 C9orf129Q5T035 196 aaKnown RBP4.92□□□□□ -1.62
TGFBR3-207ENST00000525962 SBSPONQ8IVN8 264 aa4.92□□□□□ -1.62
TGFBR3-207ENST00000525962 IGKV2-28A0A075B6P5 120 aa4.92□□□□□ -1.62
TGFBR3-207ENST00000525962 FAM236DA0A1B0GTK5 79 aa4.92□□□□□ -1.62
TGFBR3-207ENST00000525962 IGKV2D-28P01615 120 aa4.92□□□□□ -1.62
TGFBR3-207ENST00000525962 FAM236CP0DP71 79 aa4.92□□□□□ -1.62
TGFBR3-207ENST00000525962 C1orf195Q5TG92 126 aa4.92□□□□□ -1.62
TGFBR3-207ENST00000525962 NIPBLQ6KC79 2804 aaeCLIP4.91□□□□□ -1.62
TGFBR3-207ENST00000525962 FAM240AA0A1B0GVK7 77 aa4.91□□□□□ -1.62
TGFBR3-207ENST00000525962 C11orf72Q8NBR9 251 aa4.91□□□□□ -1.62
TGFBR3-207ENST00000525962 SPART-AS1P0CW21 52 aa4.91□□□□□ -1.62
TGFBR3-207ENST00000525962 COX7BP24311 80 aa4.91□□□□□ -1.62
TGFBR3-207ENST00000525962 APOC4P55056 127 aa4.91□□□□□ -1.62
TGFBR3-207ENST00000525962 CELA1Q9UNI1 258 aa4.91□□□□□ -1.62
TGFBR3-207ENST00000525962 ETDCA0A1B0GVM5 59 aa4.9□□□□□ -1.62
TGFBR3-207ENST00000525962 TRBV6-4A0A1B0GX49 114 aa4.9□□□□□ -1.62
TGFBR3-207ENST00000525962 CCKP06307 115 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms