RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 TRRAPQ9Y4A5 3859 aa6.79□□□□□ -1.32
VPS13B-212ENST00000524330 NUPR2A6NF83 97 aa6.78□□□□□ -1.32
VPS13B-212ENST00000524330 UBE2V1Q13404 147 aa6.78□□□□□ -1.32
VPS13B-212ENST00000524330 Q1RN00 199 aa6.78□□□□□ -1.32
VPS13B-212ENST00000524330 ENHOQ6UWT2 76 aa6.78□□□□□ -1.32
VPS13B-212ENST00000524330 LITAFQ99732 161 aa6.78□□□□□ -1.32
VPS13B-212ENST00000524330 UPK3BQ9BT76 320 aa6.78□□□□□ -1.32
VPS13B-212ENST00000524330 PGPEP1Q9NXJ5 209 aa6.78□□□□□ -1.32
VPS13B-212ENST00000524330 K7ERJ3 54 aa6.77□□□□□ -1.33
VPS13B-212ENST00000524330 COX6CP09669 75 aa6.77□□□□□ -1.33
VPS13B-212ENST00000524330 SPAG11BQ08648 103 aa6.77□□□□□ -1.33
VPS13B-212ENST00000524330 UBE2DNLQ8IWF7 75 aa6.77□□□□□ -1.33
VPS13B-212ENST00000524330 LINC00308Q8TCZ7 52 aa6.77□□□□□ -1.33
VPS13B-212ENST00000524330 SPCS1Q9Y6A9 102 aa6.77□□□□□ -1.33
VPS13B-212ENST00000524330 NBEAL2Q6ZNJ1 2754 aa6.77□□□□□ -1.33
VPS13B-212ENST00000524330 ZNF561-AS1K7EIQ3 104 aa6.76□□□□□ -1.33
VPS13B-212ENST00000524330 CFC1BP0CG36 223 aa6.76□□□□□ -1.33
VPS13B-212ENST00000524330 CFC1P0CG37 223 aa6.76□□□□□ -1.33
VPS13B-212ENST00000524330 PSMB2P49721 201 aa6.76□□□□□ -1.33
VPS13B-212ENST00000524330 ADAMTSL4-AS1Q5T5F5 129 aa6.76□□□□□ -1.33
VPS13B-212ENST00000524330 IGKV2D-24A0A075B6R9 120 aa6.75□□□□□ -1.33
VPS13B-212ENST00000524330 A0A0U1RRA0 63 aa6.75□□□□□ -1.33
VPS13B-212ENST00000524330 K7EP34 96 aa6.75□□□□□ -1.33
VPS13B-212ENST00000524330 SCGB1C2P0DMR2 95 aa6.75□□□□□ -1.33
VPS13B-212ENST00000524330 Q8N3U1 123 aa6.75□□□□□ -1.33
VPS13B-212ENST00000524330 LINC00588Q9Y4M8 146 aa6.75□□□□□ -1.33
VPS13B-212ENST00000524330 TRBV20-1A0A075B6N2 111 aa6.74□□□□□ -1.33
VPS13B-212ENST00000524330 TRAV13-2A0A0B4J235 113 aa6.74□□□□□ -1.33
VPS13B-212ENST00000524330 LOC107984156A0A0G2JMH3 177 aa6.74□□□□□ -1.33
VPS13B-212ENST00000524330 NPC2P61916 151 aa6.74□□□□□ -1.33
VPS13B-212ENST00000524330 ARL17AQ8IVW1 177 aa6.74□□□□□ -1.33
VPS13B-212ENST00000524330 MIR7-3HGQ8N6C7 128 aa6.74□□□□□ -1.33
VPS13B-212ENST00000524330 CMYA5Q8N3K9 4069 aa6.74□□□□□ -1.33
VPS13B-212ENST00000524330 ANK2Q01484 3957 aa6.74□□□□□ -1.33
VPS13B-212ENST00000524330 DNAH3Q8TD57 4116 aa6.74□□□□□ -1.33
VPS13B-212ENST00000524330 TSPAN13O95857 204 aa6.73□□□□□ -1.33
VPS13B-212ENST00000524330 PFN2P35080 140 aa6.73□□□□□ -1.33
VPS13B-212ENST00000524330 KIAA0087Q14695 138 aa6.73□□□□□ -1.33
VPS13B-212ENST00000524330 C2orf48Q96LS8 159 aa6.73□□□□□ -1.33
VPS13B-212ENST00000524330 TRBV30A0A0K0K1B3 111 aa6.72□□□□□ -1.33
VPS13B-212ENST00000524330 DAND5Q8N907 189 aa6.72□□□□□ -1.33
VPS13B-212ENST00000524330 SND1-IT1Q9HBX3 110 aa6.72□□□□□ -1.33
VPS13B-212ENST00000524330 GVQW2A0A096LPI5 108 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-212ENST00000524330 RPL13AP40429 203 aaKnown RBP6.71□□□□□ -1.34
VPS13B-212ENST00000524330 TTC32Q5I0X7 151 aa6.71□□□□□ -1.34
VPS13B-212ENST00000524330 NTN5Q8WTR8 489 aaPredicted RBP6.71□□□□□ -1.34
VPS13B-212ENST00000524330 CAMK2N2Q96S95 79 aa6.71□□□□□ -1.34
VPS13B-212ENST00000524330 NAA38Q9BRA0 125 aaKnown RBP6.71□□□□□ -1.34
VPS13B-212ENST00000524330 H7C2G1 150 aa6.7□□□□□ -1.34
VPS13B-212ENST00000524330 C2orf82Q6UX34 121 aa6.7□□□□□ -1.34
VPS13B-212ENST00000524330 Q9HAA7 133 aa6.7□□□□□ -1.34
VPS13B-212ENST00000524330 APLNQ9ULZ1 77 aa6.7□□□□□ -1.34
VPS13B-212ENST00000524330 NDUFC2O95298 119 aa6.69□□□□□ -1.34
VPS13B-212ENST00000524330 MGAM2Q2M2H8 2515 aa6.69□□□□□ -1.34
VPS13B-212ENST00000524330 NOTCH1P46531 2555 aa6.68□□□□□ -1.34
VPS13B-212ENST00000524330 PKD1L1Q8TDX9 2849 aa6.68□□□□□ -1.34
VPS13B-212ENST00000524330 F8W1H4 67 aa6.68□□□□□ -1.34
VPS13B-212ENST00000524330 ATXN8Q156A1 80 aa6.68□□□□□ -1.34
VPS13B-212ENST00000524330 CBY1Q9Y3M2 126 aa6.68□□□□□ -1.34
VPS13B-212ENST00000524330 C14orf177Q52M58 125 aa6.67□□□□□ -1.34
VPS13B-212ENST00000524330 KRTAP26-1Q6PEX3 210 aa6.67□□□□□ -1.34
VPS13B-212ENST00000524330 UNQ6190/PRO20217Q6UXQ8 127 aa6.67□□□□□ -1.34
VPS13B-212ENST00000524330 SOSTDC1Q6X4U4 206 aa6.67□□□□□ -1.34
VPS13B-212ENST00000524330 PSCAO43653 123 aa6.66□□□□□ -1.34
VPS13B-212ENST00000524330 SNCGO76070 127 aa6.66□□□□□ -1.34
VPS13B-212ENST00000524330 SYCNQ0VAF6 134 aa6.66□□□□□ -1.34
VPS13B-212ENST00000524330 RNF151Q2KHN1 245 aa6.66□□□□□ -1.34
VPS13B-212ENST00000524330 HIGD2BQ4VC39 106 aa6.66□□□□□ -1.34
VPS13B-212ENST00000524330 OR13C6PQ8NH95 151 aa6.66□□□□□ -1.34
VPS13B-212ENST00000524330 PKIGQ9Y2B9 76 aa6.66□□□□□ -1.34
VPS13B-212ENST00000524330 C6orf223Q8N319 242 aa6.65□□□□□ -1.34
VPS13B-212ENST00000524330 C15orf56Q8N910 161 aa6.65□□□□□ -1.34
VPS13B-212ENST00000524330 H0YGX0 51 aa6.64□□□□□ -1.35
VPS13B-212ENST00000524330 CARD19Q96LW7 228 aa6.64□□□□□ -1.35
VPS13B-212ENST00000524330 TMEM126AQ9H061 195 aa6.64□□□□□ -1.35
VPS13B-212ENST00000524330 C6orf48Q9UBA6 75 aa6.64□□□□□ -1.35
VPS13B-212ENST00000524330 TRBV10-2A0A0K0K1G8 114 aa6.63□□□□□ -1.35
VPS13B-212ENST00000524330 H3BMG7 143 aa6.63□□□□□ -1.35
VPS13B-212ENST00000524330 TRIAP1O43715 76 aa6.63□□□□□ -1.35
VPS13B-212ENST00000524330 RPL28P46779 137 aaKnown RBP6.63□□□□□ -1.35
VPS13B-212ENST00000524330 S100A7L2Q5SY68 101 aa6.63□□□□□ -1.35
VPS13B-212ENST00000524330 USP17L23D6RBM5 183 aa6.62□□□□□ -1.35
VPS13B-212ENST00000524330 NDUFC2-KCTD14E9PQ53 114 aa6.62□□□□□ -1.35
VPS13B-212ENST00000524330 J3QR89 54 aa6.62□□□□□ -1.35
VPS13B-212ENST00000524330 EIF4EBP3O60516 100 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-212ENST00000524330 TCL1BO95988 128 aa6.62□□□□□ -1.35
VPS13B-212ENST00000524330 C9orf116Q5BN46 136 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-212ENST00000524330 C10orf25Q5T742 122 aa6.62□□□□□ -1.35
VPS13B-212ENST00000524330 Q6ZRU5 148 aa6.62□□□□□ -1.35
VPS13B-212ENST00000524330 LINC00526Q96FQ7 95 aa6.62□□□□□ -1.35
VPS13B-212ENST00000524330 NBEAL1Q6ZS30 2694 aa6.62□□□□□ -1.35
VPS13B-212ENST00000524330 TENM3Q9P273 2699 aa6.6□□□□□ -1.35
VPS13B-212ENST00000524330 IGKV2-28A0A075B6P5 120 aa6.6□□□□□ -1.35
VPS13B-212ENST00000524330 NBDYA0A0U1RRE5 68 aa6.6□□□□□ -1.35
VPS13B-212ENST00000524330 K7ERU9 68 aa6.6□□□□□ -1.35
VPS13B-212ENST00000524330 IGKV2D-28P01615 120 aa6.6□□□□□ -1.35
VPS13B-212ENST00000524330 TLX1NBP0CAT3 122 aa6.6□□□□□ -1.35
VPS13B-212ENST00000524330 LINC01620Q4KN68 170 aa6.6□□□□□ -1.35
VPS13B-212ENST00000524330 LINC00337Q8N6G1 96 aa6.6□□□□□ -1.35
VPS13B-212ENST00000524330 M0QXV9 152 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms