RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 JMJD7-PLA2G4BH0Y9G9 81 aa9.29□□□□□ -0.92
PCDHGB1-201ENST00000523390 KLK9Q2XQG4 91 aa9.28□□□□□ -0.92
PCDHGB1-201ENST00000523390 Q9UF83 564 aa9.28□□□□□ -0.92
PCDHGB1-201ENST00000523390 TRBV30A0A0K0K1B3 111 aa9.28□□□□□ -0.92
PCDHGB1-201ENST00000523390 M0R2N4 97 aa9.28□□□□□ -0.92
PCDHGB1-201ENST00000523390 RBM3P98179 157 aaKnown RBP9.28□□□□□ -0.92
PCDHGB1-201ENST00000523390 C14orf177Q52M58 125 aa9.28□□□□□ -0.92
PCDHGB1-201ENST00000523390 TMEM256-PLSCR3K7ERE1 68 aa9.27□□□□□ -0.93
PCDHGB1-201ENST00000523390 FAM19A5Q7Z5A7 132 aaPredicted RBP9.27□□□□□ -0.93
PCDHGB1-201ENST00000523390 CYSRT1A8MQ03 144 aa9.27□□□□□ -0.93
PCDHGB1-201ENST00000523390 XGP55808 180 aa9.27□□□□□ -0.93
PCDHGB1-201ENST00000523390 UNQ6190/PRO20217Q6UXQ8 127 aa9.27□□□□□ -0.93
PCDHGB1-201ENST00000523390 Q8IZM0 81 aa9.26□□□□□ -0.93
PCDHGB1-201ENST00000523390 C9orf116Q5BN46 136 aaPredicted RBP9.26□□□□□ -0.93
PCDHGB1-201ENST00000523390 MUC3AQ02505 3323 aa9.25□□□□□ -0.93
PCDHGB1-201ENST00000523390 CSDC2Q9Y534 153 aaKnown RBP9.25□□□□□ -0.93
PCDHGB1-201ENST00000523390 A0A087WZ39 114 aa9.25□□□□□ -0.93
PCDHGB1-201ENST00000523390 IGKV2-28A0A075B6P5 120 aa9.24□□□□□ -0.93
PCDHGB1-201ENST00000523390 IGKV2D-28P01615 120 aa9.24□□□□□ -0.93
PCDHGB1-201ENST00000523390 CELA1Q9UNI1 258 aa9.24□□□□□ -0.93
PCDHGB1-201ENST00000523390 NREPQ16612 68 aa9.24□□□□□ -0.93
PCDHGB1-201ENST00000523390 ADAMTSL4-AS1Q5T5F5 129 aa9.24□□□□□ -0.93
PCDHGB1-201ENST00000523390 KRTAP24-1Q3LI83 254 aa9.23□□□□□ -0.93
PCDHGB1-201ENST00000523390 SMIM11BQ8TCY0 68 aa9.22□□□□□ -0.93
PCDHGB1-201ENST00000523390 A0A096LNI7 61 aa9.22□□□□□ -0.93
PCDHGB1-201ENST00000523390 WFDC10BQ8IUB3 73 aa9.22□□□□□ -0.93
PCDHGB1-201ENST00000523390 NTM-AS1Q6ZSK4 140 aa9.21□□□□□ -0.93
PCDHGB1-201ENST00000523390 SMIM20Q8N5G0 67 aa9.21□□□□□ -0.93
PCDHGB1-201ENST00000523390 FAM19A1Q7Z5A9 133 aa9.21□□□□□ -0.93
PCDHGB1-201ENST00000523390 CITED1Q99966 193 aa9.21□□□□□ -0.93
PCDHGB1-201ENST00000523390 DMDP11532 3685 aa9.21□□□□□ -0.94
PCDHGB1-201ENST00000523390 CHD6Q8TD26 2715 aa9.21□□□□□ -0.94
PCDHGB1-201ENST00000523390 TRAV23DV6A0A075B6W5 121 aa9.2□□□□□ -0.94
PCDHGB1-201ENST00000523390 H3BQ85 93 aa9.2□□□□□ -0.94
PCDHGB1-201ENST00000523390 FAM236AA0A1B0GUQ0 79 aa9.2□□□□□ -0.94
PCDHGB1-201ENST00000523390 FAM236BA0A1B0GV22 79 aa9.2□□□□□ -0.94
PCDHGB1-201ENST00000523390 FLNCQ14315 2725 aa9.2□□□□□ -0.94
PCDHGB1-201ENST00000523390 LST1O00453 97 aa9.2□□□□□ -0.94
PCDHGB1-201ENST00000523390 Q6ZQY7 126 aa9.19□□□□□ -0.94
PCDHGB1-201ENST00000523390 LYPD5Q6UWN5 251 aa9.19□□□□□ -0.94
PCDHGB1-201ENST00000523390 ADGRG4Q8IZF6 3080 aa9.19□□□□□ -0.94
PCDHGB1-201ENST00000523390 PRR3P79522 188 aaKnown RBP9.19□□□□□ -0.94
PCDHGB1-201ENST00000523390 LOC400499M0QZD8 3231 aa9.18□□□□□ -0.94
PCDHGB1-201ENST00000523390 A0A1B0GUV1 79 aa9.18□□□□□ -0.94
PCDHGB1-201ENST00000523390 KALRNO60229 2985 aa9.18□□□□□ -0.94
PCDHGB1-201ENST00000523390 X6R8D5 127 aa9.18□□□□□ -0.94
PCDHGB1-201ENST00000523390 C6orf223Q8N319 242 aa9.17□□□□□ -0.94
PCDHGB1-201ENST00000523390 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
PCDHGB1-201ENST00000523390 TEX15Q9BXT5 2789 aa9.17□□□□□ -0.94
PCDHGB1-201ENST00000523390 COX17Q14061 63 aa9.17□□□□□ -0.94
PCDHGB1-201ENST00000523390 TACC2O95359 2948 aa9.17□□□□□ -0.94
PCDHGB1-201ENST00000523390 UNC79Q9P2D8 2635 aa9.16□□□□□ -0.94
PCDHGB1-201ENST00000523390 M0R378 163 aa9.16□□□□□ -0.94
PCDHGB1-201ENST00000523390 LINC01546A6NGU7 62 aa9.16□□□□□ -0.94
PCDHGB1-201ENST00000523390 LY6G6CO95867 125 aa9.16□□□□□ -0.94
PCDHGB1-201ENST00000523390 NDUFV3P56181 108 aaKnown RBP9.16□□□□□ -0.94
PCDHGB1-201ENST00000523390 B9D2Q9BPU9 175 aa9.16□□□□□ -0.94
PCDHGB1-201ENST00000523390 SMCPP49901 116 aaPredicted RBP9.15□□□□□ -0.94
PCDHGB1-201ENST00000523390 A0A1B0GX51 115 aa9.15□□□□□ -0.94
PCDHGB1-201ENST00000523390 LINC00643Q86TS7 51 aa9.15□□□□□ -0.94
PCDHGB1-201ENST00000523390 PDE6GP18545 87 aa9.15□□□□□ -0.95
PCDHGB1-201ENST00000523390 NDUFS5O43920 106 aa9.14□□□□□ -0.95
PCDHGB1-201ENST00000523390 CDIP1Q9H305 208 aa9.14□□□□□ -0.95
PCDHGB1-201ENST00000523390 KRTAP1-3Q8IUG1 177 aa9.14□□□□□ -0.95
PCDHGB1-201ENST00000523390 EGFEM1PQ0D2K5 195 aa9.14□□□□□ -0.95
PCDHGB1-201ENST00000523390 PRO0461Q9UI25 63 aa9.14□□□□□ -0.95
PCDHGB1-201ENST00000523390 STAB1Q9NY15 2570 aa9.14□□□□□ -0.95
PCDHGB1-201ENST00000523390 DMXL2Q8TDJ6 3036 aa9.13□□□□□ -0.95
PCDHGB1-201ENST00000523390 ZNF73O43830 326 aaPredicted RBP9.13□□□□□ -0.95
PCDHGB1-201ENST00000523390 USP17L23D6RBM5 183 aa9.13□□□□□ -0.95
PCDHGB1-201ENST00000523390 SETXQ7Z333 2677 aaKnown RBP9.13□□□□□ -0.95
PCDHGB1-201ENST00000523390 ATMQ13315 3056 aa9.13□□□□□ -0.95
PCDHGB1-201ENST00000523390 LOC107984640A0A0U1RRK4 108 aa9.12□□□□□ -0.95
PCDHGB1-201ENST00000523390 CFAP47Q6ZTR5 3102 aa9.12□□□□□ -0.95
PCDHGB1-201ENST00000523390 IGHV3OR16-9A0A0B4J2B5 98 aa9.12□□□□□ -0.95
PCDHGB1-201ENST00000523390 LRCOL1A6NCL2 159 aa9.12□□□□□ -0.95
PCDHGB1-201ENST00000523390 CCDC179H3BU77 68 aa9.11□□□□□ -0.95
PCDHGB1-201ENST00000523390 SCXQ7RTU7 201 aa9.11□□□□□ -0.95
PCDHGB1-201ENST00000523390 TRBV10-3A0A0K0K1G6 114 aa9.11□□□□□ -0.95
PCDHGB1-201ENST00000523390 PPDPFQ9H3Y8 114 aa9.11□□□□□ -0.95
PCDHGB1-201ENST00000523390 SDIM1Q6ZPB5 146 aa9.1□□□□□ -0.95
PCDHGB1-201ENST00000523390 NDUFB1O75438 58 aa9.1□□□□□ -0.95
PCDHGB1-201ENST00000523390 COL6A5A8TX70 2615 aa9.1□□□□□ -0.95
PCDHGB1-201ENST00000523390 NUPR2A6NF83 97 aa9.09□□□□□ -0.95
PCDHGB1-201ENST00000523390 ATOX1O00244 68 aa9.09□□□□□ -0.95
PCDHGB1-201ENST00000523390 IGLV5-39A0A0G2JS06 123 aa9.09□□□□□ -0.95
PCDHGB1-201ENST00000523390 CCKP06307 115 aa9.09□□□□□ -0.95
PCDHGB1-201ENST00000523390 MUC7Q8TAX7 377 aa9.09□□□□□ -0.95
PCDHGB1-201ENST00000523390 BPY2O14599 106 aa9.08□□□□□ -0.96
PCDHGB1-201ENST00000523390 SBSPONQ8IVN8 264 aa9.08□□□□□ -0.96
PCDHGB1-201ENST00000523390 Q8N3U1 123 aa9.08□□□□□ -0.96
PCDHGB1-201ENST00000523390 RPL28P46779 137 aaKnown RBP9.08□□□□□ -0.96
PCDHGB1-201ENST00000523390 ESRGQ1W209 222 aa9.08□□□□□ -0.96
PCDHGB1-201ENST00000523390 Q8NAQ8 132 aa9.07□□□□□ -0.96
PCDHGB1-201ENST00000523390 WFDC9Q8NEX5 89 aa9.07□□□□□ -0.96
PCDHGB1-201ENST00000523390 C3orf84H3BNL1 204 aa9.07□□□□□ -0.96
PCDHGB1-201ENST00000523390 GCN1Q92616 2671 aaKnown RBP9.06□□□□□ -0.96
PCDHGB1-201ENST00000523390 KRTAP1-1Q07627 177 aa9.06□□□□□ -0.96
PCDHGB1-201ENST00000523390 Q6ZRU5 148 aa9.06□□□□□ -0.96
PCDHGB1-201ENST00000523390 H0Y9J4 135 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms