RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 FAM19A3Q7Z5A8 133 aa7.1□□□□□ -1.27
CTNNA1-237ENST00000523275 CTDSP1Q9GZU7 261 aa7.1□□□□□ -1.27
CTNNA1-237ENST00000523275 RNF213Q63HN8 5207 aa7.09□□□□□ -1.27
CTNNA1-237ENST00000523275 IGLV1-50A0A075B6I6 118 aa7.09□□□□□ -1.27
CTNNA1-237ENST00000523275 HERVK_113P63121 156 aa7.09□□□□□ -1.27
CTNNA1-237ENST00000523275 SEC11AP67812 179 aa7.09□□□□□ -1.27
CTNNA1-237ENST00000523275 Q8IZM0 81 aa7.09□□□□□ -1.27
CTNNA1-237ENST00000523275 ALKBH7Q9BT30 221 aaPredicted RBP7.09□□□□□ -1.27
CTNNA1-237ENST00000523275 KRTAP1-4P0C5Y4 121 aa7.08□□□□□ -1.28
CTNNA1-237ENST00000523275 GEMIN7Q9H840 131 aaKnown RBP7.08□□□□□ -1.28
CTNNA1-237ENST00000523275 CDKN2A-AS1Q9UH64 79 aa7.08□□□□□ -1.28
CTNNA1-237ENST00000523275 LBHQ53QV2 105 aaPredicted RBP7.07□□□□□ -1.28
CTNNA1-237ENST00000523275 LINC00469Q8N7U9 141 aa7.07□□□□□ -1.28
CTNNA1-237ENST00000523275 TIMM17AQ99595 171 aa7.07□□□□□ -1.28
CTNNA1-237ENST00000523275 F8VRH5 84 aa7.06□□□□□ -1.28
CTNNA1-237ENST00000523275 TOMM6Q96B49 74 aa7.06□□□□□ -1.28
CTNNA1-237ENST00000523275 XAGE1AQ9HD64 81 aa7.06□□□□□ -1.28
CTNNA1-237ENST00000523275 C22orf24Q9Y442 160 aa7.06□□□□□ -1.28
CTNNA1-237ENST00000523275 ZNF861PO60384 105 aa7.05□□□□□ -1.28
CTNNA1-237ENST00000523275 RPL13AP40429 203 aaKnown RBP7.05□□□□□ -1.28
CTNNA1-237ENST00000523275 KIAA1644Q3SXP7 199 aa7.05□□□□□ -1.28
CTNNA1-237ENST00000523275 ERASQ7Z444 233 aa7.05□□□□□ -1.28
CTNNA1-237ENST00000523275 SCGB3A1Q96QR1 104 aa7.05□□□□□ -1.28
CTNNA1-237ENST00000523275 CLLU1Q5K131 121 aa7.04□□□□□ -1.28
CTNNA1-237ENST00000523275 CARHSP1Q9Y2V2 147 aaKnown RBP7.04□□□□□ -1.28
CTNNA1-237ENST00000523275 TRAV9-1A0A075B6T8 112 aa7.03□□□□□ -1.28
CTNNA1-237ENST00000523275 NUPR1O60356 82 aa7.03□□□□□ -1.28
CTNNA1-237ENST00000523275 CXCL5P42830 114 aa7.03□□□□□ -1.28
CTNNA1-237ENST00000523275 TP73-AS1Q9UF72 201 aa7.03□□□□□ -1.28
CTNNA1-237ENST00000523275 TINCRA0A1B0GVN0 87 aa7.02□□□□□ -1.29
CTNNA1-237ENST00000523275 LINC01549A6NIU2 74 aa7.02□□□□□ -1.29
CTNNA1-237ENST00000523275 SMIM1B2RUZ4 78 aa7.02□□□□□ -1.29
CTNNA1-237ENST00000523275 ADCYAP1P18509 176 aa7.02□□□□□ -1.29
CTNNA1-237ENST00000523275 PDZD11Q5EBL8 140 aa7.02□□□□□ -1.29
CTNNA1-237ENST00000523275 MRPL55Q7Z7F7 128 aaKnown RBP7.02□□□□□ -1.29
CTNNA1-237ENST00000523275 TMEM218A2RU14 115 aa7.01□□□□□ -1.29
CTNNA1-237ENST00000523275 LINC01546A6NGU7 62 aa7.01□□□□□ -1.29
CTNNA1-237ENST00000523275 UQCC3Q6UW78 93 aa7.01□□□□□ -1.29
CTNNA1-237ENST00000523275 COX7B2Q8TF08 81 aa7.01□□□□□ -1.29
CTNNA1-237ENST00000523275 GNB1LQ9BYB4 327 aa7.01□□□□□ -1.29
CTNNA1-237ENST00000523275 CST9LQ9H4G1 147 aa7.01□□□□□ -1.29
CTNNA1-237ENST00000523275 IGLV5-45A0A087WSX0 123 aa7□□□□□ -1.29
CTNNA1-237ENST00000523275 S100PP25815 95 aa7□□□□□ -1.29
CTNNA1-237ENST00000523275 RPL28P46779 137 aaKnown RBP7□□□□□ -1.29
CTNNA1-237ENST00000523275 BCE1O60756 84 aa6.99□□□□□ -1.29
CTNNA1-237ENST00000523275 PMVKQ15126 192 aa6.99□□□□□ -1.29
CTNNA1-237ENST00000523275 PRR4Q16378 134 aa6.99□□□□□ -1.29
CTNNA1-237ENST00000523275 LINC00167Q96N53 147 aa6.99□□□□□ -1.29
CTNNA1-237ENST00000523275 RPL37AP8A6NKH3 93 aa6.98□□□□□ -1.29
CTNNA1-237ENST00000523275 SPINK8P0C7L1 97 aa6.98□□□□□ -1.29
CTNNA1-237ENST00000523275 RAB5BP61020 215 aa6.98□□□□□ -1.29
CTNNA1-237ENST00000523275 MRPL18Q9H0U6 180 aaKnown RBP6.98□□□□□ -1.29
CTNNA1-237ENST00000523275 COX19Q49B96 90 aa6.97□□□□□ -1.29
CTNNA1-237ENST00000523275 FA2HQ7L5A8 372 aa6.97□□□□□ -1.29
CTNNA1-237ENST00000523275 SEC11CQ9BY50 192 aa6.97□□□□□ -1.29
CTNNA1-237ENST00000523275 IGLV5-37A0A075B6J1 123 aa6.96□□□□□ -1.3
CTNNA1-237ENST00000523275 GAGE10A6NGK3 116 aa6.96□□□□□ -1.3
CTNNA1-237ENST00000523275 H3BRM9 83 aa6.96□□□□□ -1.3
CTNNA1-237ENST00000523275 FABP9Q0Z7S8 132 aa6.96□□□□□ -1.3
CTNNA1-237ENST00000523275 SMCO4Q9NRQ5 59 aa6.96□□□□□ -1.3
CTNNA1-237ENST00000523275 LPAP08519 4548 aa6.96□□□□□ -1.3
CTNNA1-237ENST00000523275 ATP5LO75964 103 aa6.95□□□□□ -1.3
CTNNA1-237ENST00000523275 TSPAN13O95857 204 aa6.95□□□□□ -1.3
CTNNA1-237ENST00000523275 CRYGAP11844 174 aa6.95□□□□□ -1.3
CTNNA1-237ENST00000523275 NKAPP1Q8N9T2 125 aa6.95□□□□□ -1.3
CTNNA1-237ENST00000523275 A0A087X002 238 aa6.94□□□□□ -1.3
CTNNA1-237ENST00000523275 IFITM2Q01629 132 aa6.94□□□□□ -1.3
CTNNA1-237ENST00000523275 IGLC3P0DOY3 106 aa6.93□□□□□ -1.3
CTNNA1-237ENST00000523275 NDUFA6P56556 154 aa6.93□□□□□ -1.3
CTNNA1-237ENST00000523275 TYMSOSQ8TAI1 123 aa6.93□□□□□ -1.3
CTNNA1-237ENST00000523275 IGLV5-39A0A0G2JS06 123 aa6.92□□□□□ -1.3
CTNNA1-237ENST00000523275 GHRHP01286 108 aa6.92□□□□□ -1.3
CTNNA1-237ENST00000523275 PFN2P35080 140 aa6.92□□□□□ -1.3
CTNNA1-237ENST00000523275 UBE2AP49459 152 aa6.92□□□□□ -1.3
CTNNA1-237ENST00000523275 KRTAP13-1Q8IUC0 172 aa6.92□□□□□ -1.3
CTNNA1-237ENST00000523275 RHEBQ15382 184 aa6.91□□□□□ -1.3
CTNNA1-237ENST00000523275 C10orf91Q5T1B1 145 aa6.91□□□□□ -1.3
CTNNA1-237ENST00000523275 RPS10P5Q9NQ39 176 aa6.91□□□□□ -1.3
CTNNA1-237ENST00000523275 ANAPC11Q9NYG5 84 aa6.91□□□□□ -1.3
CTNNA1-237ENST00000523275 IGKV2-28A0A075B6P5 120 aa6.9□□□□□ -1.3
CTNNA1-237ENST00000523275 A0A096LNJ9 63 aa6.9□□□□□ -1.3
CTNNA1-237ENST00000523275 SCO1O75880 301 aa6.9□□□□□ -1.3
CTNNA1-237ENST00000523275 IGKV2D-28P01615 120 aa6.9□□□□□ -1.3
CTNNA1-237ENST00000523275 LINC00614P0C842 121 aa6.9□□□□□ -1.3
CTNNA1-237ENST00000523275 ZNF22P17026 224 aaPredicted RBP6.9□□□□□ -1.3
CTNNA1-237ENST00000523275 COMMD7Q86VX2 200 aa6.9□□□□□ -1.3
CTNNA1-237ENST00000523275 SND1-IT1Q9HBX3 110 aa6.9□□□□□ -1.3
CTNNA1-237ENST00000523275 ERG28Q9UKR5 140 aa6.9□□□□□ -1.3
CTNNA1-237ENST00000523275 RPL24P83731 157 aaKnown RBP6.89□□□□□ -1.31
CTNNA1-237ENST00000523275 COX17Q14061 63 aa6.89□□□□□ -1.31
CTNNA1-237ENST00000523275 FAM229BQ4G0N7 80 aa6.89□□□□□ -1.31
CTNNA1-237ENST00000523275 C18orf32Q8TCD1 76 aa6.89□□□□□ -1.31
CTNNA1-237ENST00000523275 URB1-AS1Q96HZ7 61 aa6.89□□□□□ -1.31
CTNNA1-237ENST00000523275 TRAPPC1Q9Y5R8 145 aa6.89□□□□□ -1.31
CTNNA1-237ENST00000523275 HBDP02042 147 aa6.88□□□□□ -1.31
CTNNA1-237ENST00000523275 VPREB1P12018 145 aa6.88□□□□□ -1.31
CTNNA1-237ENST00000523275 KRTAP13-2Q52LG2 175 aa6.88□□□□□ -1.31
CTNNA1-237ENST00000523275 PMCHL1Q16048 86 aa6.87□□□□□ -1.31
CTNNA1-237ENST00000523275 BAGE3Q86Y29 109 aa6.87□□□□□ -1.31
CTNNA1-237ENST00000523275 ZNF625Q96I27 306 aaPredicted RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms