RNA–Protein interactions for RNA: ENST00000522387.5

PABPC1-219, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-219ENST00000522387 VCX2Q9H322 139 aa8.43□□□□□ -1.06
PABPC1-219ENST00000522387 MT-ATP8P03928 68 aa8.42□□□□□ -1.06
PABPC1-219ENST00000522387 ANKRD29Q8N6D5 301 aa8.42□□□□□ -1.06
PABPC1-219ENST00000522387 DGAT2L7PQ6IED9 249 aa8.42□□□□□ -1.06
PABPC1-219ENST00000522387 Q6ZUT4 128 aa8.42□□□□□ -1.06
PABPC1-219ENST00000522387 ERG28Q9UKR5 140 aa8.42□□□□□ -1.06
PABPC1-219ENST00000522387 A0A0B4J2C4 111 aa8.41□□□□□ -1.06
PABPC1-219ENST00000522387 H7C2G1 150 aa8.41□□□□□ -1.06
PABPC1-219ENST00000522387 ANGP03950 147 aaKnown RBP8.41□□□□□ -1.06
PABPC1-219ENST00000522387 XGP55808 180 aa8.41□□□□□ -1.06
PABPC1-219ENST00000522387 KLK12Q9UKR0 248 aa8.41□□□□□ -1.06
PABPC1-219ENST00000522387 UBE2D4Q9Y2X8 147 aa8.41□□□□□ -1.06
PABPC1-219ENST00000522387 SACSQ9NZJ4 4579 aa8.41□□□□□ -1.06
PABPC1-219ENST00000522387 SLC25A20O43772 301 aa8.4□□□□□ -1.06
PABPC1-219ENST00000522387 A0A0J9YXY3 114 aa8.4□□□□□ -1.07
PABPC1-219ENST00000522387 C9JAW5 83 aa8.4□□□□□ -1.07
PABPC1-219ENST00000522387 LINC00269Q8N2A0 174 aa8.4□□□□□ -1.07
PABPC1-219ENST00000522387 DNAH2Q9P225 4427 aa8.39□□□□□ -1.07
PABPC1-219ENST00000522387 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.39□□□□□ -1.07
PABPC1-219ENST00000522387 Q1RN00 199 aa8.39□□□□□ -1.07
PABPC1-219ENST00000522387 IGLV10-54A0A075B6I4 117 aa8.38□□□□□ -1.07
PABPC1-219ENST00000522387 TIMM21Q9BVV7 248 aa8.38□□□□□ -1.07
PABPC1-219ENST00000522387 Q9HAA7 133 aa8.38□□□□□ -1.07
PABPC1-219ENST00000522387 TRAV8-3A0A0A6YYJ7 113 aa8.38□□□□□ -1.07
PABPC1-219ENST00000522387 KRTAP1-5Q9BYS1 174 aa8.38□□□□□ -1.07
PABPC1-219ENST00000522387 PYGO1Q9Y3Y4 419 aa8.38□□□□□ -1.07
PABPC1-219ENST00000522387 M0QXV9 152 aa8.37□□□□□ -1.07
PABPC1-219ENST00000522387 TIRAPP58753 221 aa8.37□□□□□ -1.07
PABPC1-219ENST00000522387 LINC00476Q8WZB0 136 aa8.37□□□□□ -1.07
PABPC1-219ENST00000522387 UBE2WQ96B02 151 aa8.37□□□□□ -1.07
PABPC1-219ENST00000522387 TMEM101Q96IK0 257 aa8.37□□□□□ -1.07
PABPC1-219ENST00000522387 GEMIN7Q9H840 131 aaKnown RBP8.37□□□□□ -1.07
PABPC1-219ENST00000522387 FRAS1Q86XX4 4008 aa8.37□□□□□ -1.07
PABPC1-219ENST00000522387 TRAV13-1A0A0B4J241 112 aa8.37□□□□□ -1.07
PABPC1-219ENST00000522387 MRPS36P82909 103 aaKnown RBP8.37□□□□□ -1.07
PABPC1-219ENST00000522387 ATXN8Q156A1 80 aa8.36□□□□□ -1.07
PABPC1-219ENST00000522387 LITAFQ99732 161 aa8.36□□□□□ -1.07
PABPC1-219ENST00000522387 UPK3BQ9BT76 320 aa8.36□□□□□ -1.07
PABPC1-219ENST00000522387 CDC42SE2Q9NRR3 84 aa8.36□□□□□ -1.07
PABPC1-219ENST00000522387 LINC01620Q4KN68 170 aa8.35□□□□□ -1.07
PABPC1-219ENST00000522387 IGHV1-58A0A0C4DH39 117 aa8.35□□□□□ -1.07
PABPC1-219ENST00000522387 PRSS2P07478 247 aa8.35□□□□□ -1.07
PABPC1-219ENST00000522387 DNAH10OSP0CZ25 163 aa8.35□□□□□ -1.07
PABPC1-219ENST00000522387 LINC01556Q5JQF7 62 aa8.35□□□□□ -1.07
PABPC1-219ENST00000522387 NDUFA12Q9UI09 145 aa8.35□□□□□ -1.07
PABPC1-219ENST00000522387 TRIAP1O43715 76 aa8.34□□□□□ -1.07
PABPC1-219ENST00000522387 REG3AQ06141 175 aa8.34□□□□□ -1.07
PABPC1-219ENST00000522387 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.08
PABPC1-219ENST00000522387 A0A1B0GUV1 79 aa8.34□□□□□ -1.08
PABPC1-219ENST00000522387 COX6A2Q02221 97 aa8.34□□□□□ -1.08
PABPC1-219ENST00000522387 ADAMTSL4-AS1Q5T5F5 129 aa8.34□□□□□ -1.08
PABPC1-219ENST00000522387 NTN5Q8WTR8 489 aaPredicted RBP8.34□□□□□ -1.08
PABPC1-219ENST00000522387 SPANXA1Q9NS26 97 aa8.34□□□□□ -1.08
PABPC1-219ENST00000522387 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
PABPC1-219ENST00000522387 H7C423 109 aa8.33□□□□□ -1.08
PABPC1-219ENST00000522387 CRPP02741 224 aa8.33□□□□□ -1.08
PABPC1-219ENST00000522387 ENHOQ6UWT2 76 aa8.33□□□□□ -1.08
PABPC1-219ENST00000522387 SPANXDQ9BXN6 97 aa8.33□□□□□ -1.08
PABPC1-219ENST00000522387 SPANXCQ9NY87 97 aa8.33□□□□□ -1.08
PABPC1-219ENST00000522387 ALMS1Q8TCU4 4167 aa8.32□□□□□ -1.08
PABPC1-219ENST00000522387 XCL1P47992 114 aa8.32□□□□□ -1.08
PABPC1-219ENST00000522387 CDKN2A-AS1Q9UH64 79 aa8.32□□□□□ -1.08
PABPC1-219ENST00000522387 TRBV10-2A0A0K0K1G8 114 aa8.31□□□□□ -1.08
PABPC1-219ENST00000522387 NBDYA0A0U1RRE5 68 aa8.31□□□□□ -1.08
PABPC1-219ENST00000522387 NPC2P61916 151 aa8.31□□□□□ -1.08
PABPC1-219ENST00000522387 MIAQ16674 131 aa8.31□□□□□ -1.08
PABPC1-219ENST00000522387 IGKV2D-24A0A075B6R9 120 aa8.31□□□□□ -1.08
PABPC1-219ENST00000522387 CSDC2Q9Y534 153 aaKnown RBP8.31□□□□□ -1.08
PABPC1-219ENST00000522387 RYR3Q15413 4870 aa8.31□□□□□ -1.08
PABPC1-219ENST00000522387 LINC01600Q96MT4 127 aa8.3□□□□□ -1.08
PABPC1-219ENST00000522387 TEX49A0A1B0GTD5 131 aa8.3□□□□□ -1.08
PABPC1-219ENST00000522387 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
PABPC1-219ENST00000522387 RPL13AP40429 203 aaKnown RBP8.29□□□□□ -1.08
PABPC1-219ENST00000522387 C2orf82Q6UX34 121 aa8.29□□□□□ -1.08
PABPC1-219ENST00000522387 ANAPC13Q9BS18 74 aa8.29□□□□□ -1.08
PABPC1-219ENST00000522387 TRAV8-4A0A0B4J246 113 aa8.28□□□□□ -1.08
PABPC1-219ENST00000522387 IBA57-AS1B1ANH7 110 aa8.28□□□□□ -1.08
PABPC1-219ENST00000522387 COX6CP09669 75 aa8.28□□□□□ -1.08
PABPC1-219ENST00000522387 LINC00242Q5T6M2 205 aa8.28□□□□□ -1.08
PABPC1-219ENST00000522387 PRR34Q9NV39 138 aa8.28□□□□□ -1.08
PABPC1-219ENST00000522387 LECT2O14960 151 aa8.28□□□□□ -1.08
PABPC1-219ENST00000522387 SNCGO76070 127 aa8.28□□□□□ -1.08
PABPC1-219ENST00000522387 CHCHD10Q8WYQ3 142 aaPredicted RBP8.28□□□□□ -1.08
PABPC1-219ENST00000522387 C5orf38Q86SI9 138 aa8.27□□□□□ -1.09
PABPC1-219ENST00000522387 CLEC2BQ92478 149 aa8.27□□□□□ -1.09
PABPC1-219ENST00000522387 ZNF625Q96I27 306 aaPredicted RBP8.27□□□□□ -1.09
PABPC1-219ENST00000522387 RYR2Q92736 4967 aa8.27□□□□□ -1.09
PABPC1-219ENST00000522387 TIMM17BO60830 172 aa8.26□□□□□ -1.09
PABPC1-219ENST00000522387 DAND5Q8N907 189 aa8.26□□□□□ -1.09
PABPC1-219ENST00000522387 C1orf43Q9BWL3 253 aa8.26□□□□□ -1.09
PABPC1-219ENST00000522387 A0A0U1RRA0 63 aa8.26□□□□□ -1.09
PABPC1-219ENST00000522387 IFITM1P13164 125 aa8.26□□□□□ -1.09
PABPC1-219ENST00000522387 GAGE2BQ13066 116 aa8.26□□□□□ -1.09
PABPC1-219ENST00000522387 SS18Q15532 418 aa8.26□□□□□ -1.09
PABPC1-219ENST00000522387 GAGE2EQ4V326 116 aa8.26□□□□□ -1.09
PABPC1-219ENST00000522387 GAGE2DQ9UEU5 116 aa8.26□□□□□ -1.09
PABPC1-219ENST00000522387 LCE6AA0A183 80 aa8.25□□□□□ -1.09
PABPC1-219ENST00000522387 H3BT86 120 aa8.25□□□□□ -1.09
PABPC1-219ENST00000522387 LST1O00453 97 aa8.25□□□□□ -1.09
PABPC1-219ENST00000522387 NDUFA1O15239 70 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms