RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 Q6ZTI0 123 aa4.75□□□□□ -1.65
SPIDR-218ENST00000522222 SH2D6Q7Z4S9 175 aa4.75□□□□□ -1.65
SPIDR-218ENST00000522222 FAM19A3Q7Z5A8 133 aa4.75□□□□□ -1.65
SPIDR-218ENST00000522222 VSIG2Q96IQ7 327 aa4.75□□□□□ -1.65
SPIDR-218ENST00000522222 NDUFA12Q9UI09 145 aa4.75□□□□□ -1.65
SPIDR-218ENST00000522222 UBE2D4Q9Y2X8 147 aa4.75□□□□□ -1.65
SPIDR-218ENST00000522222 CSDC2Q9Y534 153 aaKnown RBP4.75□□□□□ -1.65
SPIDR-218ENST00000522222 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
SPIDR-218ENST00000522222 TRGV1A0A0A0MS02 117 aa4.74□□□□□ -1.65
SPIDR-218ENST00000522222 H3BT86 120 aa4.74□□□□□ -1.65
SPIDR-218ENST00000522222 H7C423 109 aa4.74□□□□□ -1.65
SPIDR-218ENST00000522222 NDUFA1O15239 70 aa4.74□□□□□ -1.65
SPIDR-218ENST00000522222 SLC25A20O43772 301 aa4.74□□□□□ -1.65
SPIDR-218ENST00000522222 RPL36AP83881 106 aaKnown RBP4.74□□□□□ -1.65
SPIDR-218ENST00000522222 DGAT2L7PQ6IED9 249 aa4.74□□□□□ -1.65
SPIDR-218ENST00000522222 DAZ4Q86SG3 579 aaKnown RBP4.74□□□□□ -1.65
SPIDR-218ENST00000522222 MUSTN1Q8IVN3 82 aa4.74□□□□□ -1.65
SPIDR-218ENST00000522222 C15orf53Q8NAA6 179 aa4.74□□□□□ -1.65
SPIDR-218ENST00000522222 RPL36ALQ969Q0 106 aaKnown RBP4.74□□□□□ -1.65
SPIDR-218ENST00000522222 DAZ3Q9NR90 486 aaKnown RBP4.74□□□□□ -1.65
SPIDR-218ENST00000522222 TRGV2A0A075B6R0 118 aa4.73□□□□□ -1.65
SPIDR-218ENST00000522222 TRBV10-2A0A0K0K1G8 114 aa4.73□□□□□ -1.65
SPIDR-218ENST00000522222 RPL13AP40429 203 aaKnown RBP4.73□□□□□ -1.65
SPIDR-218ENST00000522222 HERV-K104P63124 156 aa4.73□□□□□ -1.65
SPIDR-218ENST00000522222 SFTA2Q6UW10 78 aa4.73□□□□□ -1.65
SPIDR-218ENST00000522222 UBE2DNLQ8IWF7 75 aa4.73□□□□□ -1.65
SPIDR-218ENST00000522222 ANKRD29Q8N6D5 301 aa4.73□□□□□ -1.65
SPIDR-218ENST00000522222 CHCHD7Q9BUK0 85 aa4.73□□□□□ -1.65
SPIDR-218ENST00000522222 GTSF1LQ9H1H1 148 aa4.73□□□□□ -1.65
SPIDR-218ENST00000522222 TRAV26-1A0A087WT03 109 aa4.72□□□□□ -1.65
SPIDR-218ENST00000522222 TRAV4A0A0B4J268 109 aa4.72□□□□□ -1.65
SPIDR-218ENST00000522222 K7EQD1 137 aa4.72□□□□□ -1.65
SPIDR-218ENST00000522222 MRPL23Q16540 153 aaKnown RBP4.72□□□□□ -1.65
SPIDR-218ENST00000522222 LINC01620Q4KN68 170 aa4.72□□□□□ -1.65
SPIDR-218ENST00000522222 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
SPIDR-218ENST00000522222 NACAE9PAV3 2078 aa4.71□□□□□ -1.65
SPIDR-218ENST00000522222 IGLV5-39A0A0G2JS06 123 aa4.71□□□□□ -1.66
SPIDR-218ENST00000522222 C9JAW5 83 aa4.71□□□□□ -1.66
SPIDR-218ENST00000522222 TMEM101Q96IK0 257 aa4.71□□□□□ -1.66
SPIDR-218ENST00000522222 LITAFQ99732 161 aa4.71□□□□□ -1.66
SPIDR-218ENST00000522222 OPRPNQ99935 248 aaPredicted RBP4.71□□□□□ -1.66
SPIDR-218ENST00000522222 ICOSQ9Y6W8 199 aa4.71□□□□□ -1.66
SPIDR-218ENST00000522222 EPPK1P58107 5090 aaKnown RBP4.71□□□□□ -1.66
SPIDR-218ENST00000522222 IGHV3-64A0A075B6Q5 118 aa4.7□□□□□ -1.66
SPIDR-218ENST00000522222 IGHV3-73A0A0B4J1V6 119 aa4.7□□□□□ -1.66
SPIDR-218ENST00000522222 FAM240AA0A1B0GVK7 77 aa4.7□□□□□ -1.66
SPIDR-218ENST00000522222 UBE2L6O14933 153 aa4.7□□□□□ -1.66
SPIDR-218ENST00000522222 PRSS2P07478 247 aa4.7□□□□□ -1.66
SPIDR-218ENST00000522222 SPINK8P0C7L1 97 aa4.7□□□□□ -1.66
SPIDR-218ENST00000522222 Q6ZUT4 128 aa4.7□□□□□ -1.66
SPIDR-218ENST00000522222 UBE2WQ96B02 151 aa4.7□□□□□ -1.66
SPIDR-218ENST00000522222 CARD19Q96LW7 228 aa4.7□□□□□ -1.66
SPIDR-218ENST00000522222 DNAH10Q8IVF4 4471 aa4.7□□□□□ -1.66
SPIDR-218ENST00000522222 BIRC6Q9NR09 4857 aa4.7□□□□□ -1.66
SPIDR-218ENST00000522222 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.69□□□□□ -1.66
SPIDR-218ENST00000522222 IGKV2-29A2NJV5 120 aaPredicted RBP4.69□□□□□ -1.66
SPIDR-218ENST00000522222 H3BNG1 76 aa4.69□□□□□ -1.66
SPIDR-218ENST00000522222 M0R2N4 97 aa4.69□□□□□ -1.66
SPIDR-218ENST00000522222 LST1O00453 97 aa4.69□□□□□ -1.66
SPIDR-218ENST00000522222 SNCGO76070 127 aa4.69□□□□□ -1.66
SPIDR-218ENST00000522222 ACYP1P07311 99 aa4.69□□□□□ -1.66
SPIDR-218ENST00000522222 Q6Q795 121 aa4.69□□□□□ -1.66
SPIDR-218ENST00000522222 FAM104AQ969W3 186 aa4.69□□□□□ -1.66
SPIDR-218ENST00000522222 CDIP1Q9H305 208 aa4.69□□□□□ -1.66
SPIDR-218ENST00000522222 LINC00588Q9Y4M8 146 aa4.69□□□□□ -1.66
SPIDR-218ENST00000522222 A0A096LPF7 62 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 TRAV8-3A0A0A6YYJ7 113 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 TRAV8-4A0A0B4J246 113 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 TRBV6-4A0A1B0GX49 114 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 PAX4O43316 350 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 TRIAP1O43715 76 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 CCL18P55774 89 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 CKS1BP61024 79 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 FHL2Q14192 279 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 C2orf82Q6UX34 121 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 Q6ZR54 194 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 TMEM243Q9BU79 118 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 CDKN2A-AS1Q9UH64 79 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 PRO0255Q9UI72 69 aa4.68□□□□□ -1.66
SPIDR-218ENST00000522222 FRAS1Q86XX4 4008 aa4.67□□□□□ -1.66
SPIDR-218ENST00000522222 TRGV4A0A0C4DH28 118 aa4.67□□□□□ -1.66
SPIDR-218ENST00000522222 H7C2G1 150 aa4.67□□□□□ -1.66
SPIDR-218ENST00000522222 COX7A2LO14548 114 aa4.67□□□□□ -1.66
SPIDR-218ENST00000522222 LINC00242Q5T6M2 205 aa4.67□□□□□ -1.66
SPIDR-218ENST00000522222 DEFB104AQ8WTQ1 72 aa4.67□□□□□ -1.66
SPIDR-218ENST00000522222 TRAV13-2A0A0B4J235 113 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 LOC100131303A0A0U1RQF7 123 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 SMIM1B2RUZ4 78 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 RTL8CO15255 209 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 TRACP01848 142 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 XGP55808 180 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 ESRGQ1W209 222 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 MEIG1Q5JSS6 88 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 Q6ZSN1 163 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 LINC00308Q8TCZ7 52 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 NTN5Q8WTR8 489 aaPredicted RBP4.66□□□□□ -1.66
SPIDR-218ENST00000522222 UPK3BQ9BT76 320 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 Q9H8V8 135 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 CDC42SE2Q9NRR3 84 aa4.66□□□□□ -1.66
SPIDR-218ENST00000522222 IGHV3-38A0A0C4DH36 116 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms