RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 MRPL35Q9NZE8 188 aaKnown RBP1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 LENEPQ9Y5L5 61 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 FBN1P35555 2871 aaKnown RBP1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 CFAP47Q6ZTR5 3102 aa1.44□□□□□ -2.18
HMGN1P28-201ENST00000521340 MUC3AQ02505 3323 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 DOPEY1Q5JWR5 2465 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 CREBBPQ92793 2442 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 TRAV26-2A0A0B4J265 109 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 A0A0G2JQZ4 141 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 A0A1B0GW54 56 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 FABP5P3A8MUU1 101 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 LGALS1P09382 135 aaKnown RBP1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 SMIM13P0DJ93 91 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 UBE2D1P51668 147 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 UBE2D3P61077 147 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 UBE2D2P62837 147 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 C12orf74Q32Q52 190 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 CFAP126Q5VTH2 177 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 C5orf56Q8N8D9 126 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 RAB37Q96AX2 223 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 TOMM6Q96B49 74 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 RPL39LQ96EH5 51 aaKnown RBP1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 AMELXQ99217 191 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 C20orf78Q9BR46 151 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 DPH3P1Q9H4G8 78 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 PKIGQ9Y2B9 76 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 UFC1Q9Y3C8 167 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 COL6A3P12111 3177 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 NCOR2Q9Y618 2525 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 KMT2BQ9UMN6 2715 aaPredicted RBP1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 SPTBN4Q9H254 2564 aa1.43□□□□□ -2.18
HMGN1P28-201ENST00000521340 MGAQ8IWI9 3026 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 TRBV7-1A0A0A6YYK4 115 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 TRAV21A0A0B4J279 112 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 TRBV6-5A0A0K0K1A5 114 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 MYMXA0A1B0GTQ4 84 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 LINC01549A6NIU2 74 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 FAM223BA6NKX1 122 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 F8W1H4 67 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 G3V318 75 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 H3BMG7 143 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 H3BUA1 57 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 NDUFA4O00483 81 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 OVOL1O14753 267 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 RNASE3P12724 160 aaKnown RBP1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 ASIPP42127 132 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 MIAQ16674 131 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 TMEM78Q5T7P6 136 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 LYRM7Q5U5X0 104 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 SAMD13Q5VXD3 122 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 SBSPONQ8IVN8 264 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 FAM223AQ8IWN6 122 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 PLEKHB2Q96CS7 222 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 DNAJC30Q96LL9 226 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 LINC01600Q96MT4 127 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 ODF3Q96PU9 254 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 PRADC1Q9BSG0 188 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 PKD1L2Q7Z442 2459 aa1.42□□□□□ -2.18
HMGN1P28-201ENST00000521340 LRRK2Q5S007 2527 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 UNC79Q9P2D8 2635 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 NBEAQ8NFP9 2946 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 TRAV41A0A0B4J266 112 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 A0A0J9YY99 117 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 FAM236DA0A1B0GTK5 79 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 IGIPA6NJ69 53 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 ZNF815PA8K554 130 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 J3QR89 54 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 UBE2L6O14933 153 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 NPFFO15130 113 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 PPP1R17O96001 155 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 IGHV3-30P01768 117 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 MGPP08493 103 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 IGHV3-30-5P0DP03 117 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 FAM236CP0DP71 79 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 RNASE4P34096 147 aaKnown RBP1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 INSL3P51460 131 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 POLR2KP53803 58 aaKnown RBP1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 DEFB1P60022 68 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 WFDC2Q14508 124 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 RHOHQ15669 191 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 ETDBQ3ZM63 59 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 SPANXN1Q5VSR9 72 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 TEN1Q86WV5 123 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 NDUFA11Q86Y39 141 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 MYOZ3Q8TDC0 251 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 DCANP1Q8TF63 244 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 PPDPFLQ8WWR9 84 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 SCGB3A1Q96QR1 104 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 SIGMAR1Q99720 223 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 CYSLTR1Q9Y271 337 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 SPG11Q96JI7 2443 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 DCHS2Q6V1P9 2916 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 PTPN13Q12923 2485 aa1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 USP9XQ93008 2570 aaPredicted RBP1.41□□□□□ -2.18
HMGN1P28-201ENST00000521340 MYO9AB2RTY4 2548 aa1.4□□□□□ -2.18
HMGN1P28-201ENST00000521340 CACNA1AO00555 2505 aa1.4□□□□□ -2.18
HMGN1P28-201ENST00000521340 TLN2Q9Y4G6 2542 aa1.4□□□□□ -2.18
HMGN1P28-201ENST00000521340 DMXL1Q9Y485 3027 aa1.4□□□□□ -2.18
HMGN1P28-201ENST00000521340 ZZEF1O43149 2961 aa1.4□□□□□ -2.19
HMGN1P28-201ENST00000521340 CHD8Q9HCK8 2581 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms