RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 REG3GQ6UW15 175 aa10.49□□□□□ -0.73
SQLE-205ENST00000521232 Q8IZM0 81 aa10.49□□□□□ -0.73
SQLE-205ENST00000521232 RPS10P5Q9NQ39 176 aa10.49□□□□□ -0.73
SQLE-205ENST00000521232 CDKN2A-AS1Q9UH64 79 aa10.49□□□□□ -0.73
SQLE-205ENST00000521232 FABP9Q0Z7S8 132 aa10.48□□□□□ -0.73
SQLE-205ENST00000521232 C6orf226Q5I0X4 101 aa10.48□□□□□ -0.73
SQLE-205ENST00000521232 MRPL18Q9H0U6 180 aaKnown RBP10.48□□□□□ -0.73
SQLE-205ENST00000521232 GEMIN7Q9H840 131 aaKnown RBP10.48□□□□□ -0.73
SQLE-205ENST00000521232 UBR4Q5T4S7 5183 aa10.47□□□□□ -0.73
SQLE-205ENST00000521232 KRTAP7-1Q8IUC3 87 aa10.47□□□□□ -0.73
SQLE-205ENST00000521232 TOMM7Q9P0U1 55 aa10.47□□□□□ -0.73
SQLE-205ENST00000521232 KRTAP10-8P60410 259 aa10.46□□□□□ -0.73
SQLE-205ENST00000521232 CKS1BP61024 79 aa10.46□□□□□ -0.73
SQLE-205ENST00000521232 C1orf137Q5JT78 98 aa10.46□□□□□ -0.73
SQLE-205ENST00000521232 C9orf129Q5T035 196 aaKnown RBP10.45□□□□□ -0.74
SQLE-205ENST00000521232 FAM19A5Q7Z5A7 132 aaPredicted RBP10.45□□□□□ -0.74
SQLE-205ENST00000521232 TINCRA0A1B0GVN0 87 aa10.44□□□□□ -0.74
SQLE-205ENST00000521232 FA2HQ7L5A8 372 aa10.44□□□□□ -0.74
SQLE-205ENST00000521232 KRTAP11-1Q8IUC1 163 aa10.44□□□□□ -0.74
SQLE-205ENST00000521232 CST9LQ9H4G1 147 aa10.44□□□□□ -0.74
SQLE-205ENST00000521232 IGLV5-45A0A087WSX0 123 aa10.43□□□□□ -0.74
SQLE-205ENST00000521232 SMCO4Q9NRQ5 59 aa10.43□□□□□ -0.74
SQLE-205ENST00000521232 LINC00469Q8N7U9 141 aa10.42□□□□□ -0.74
SQLE-205ENST00000521232 SMIM1B2RUZ4 78 aa10.41□□□□□ -0.74
SQLE-205ENST00000521232 F8VRH5 84 aa10.41□□□□□ -0.74
SQLE-205ENST00000521232 M0QXV9 152 aa10.41□□□□□ -0.74
SQLE-205ENST00000521232 IGLV7-43P04211 117 aa10.41□□□□□ -0.74
SQLE-205ENST00000521232 PMVKQ15126 192 aa10.41□□□□□ -0.74
SQLE-205ENST00000521232 PDZD11Q5EBL8 140 aa10.41□□□□□ -0.74
SQLE-205ENST00000521232 TRAPPC1Q9Y5R8 145 aa10.41□□□□□ -0.74
SQLE-205ENST00000521232 APOC3P02656 99 aa10.4□□□□□ -0.74
SQLE-205ENST00000521232 CXCL5P42830 114 aa10.4□□□□□ -0.74
SQLE-205ENST00000521232 URB1-AS1Q96HZ7 61 aa10.39□□□□□ -0.75
SQLE-205ENST00000521232 A0A096LNJ9 63 aa10.38□□□□□ -0.75
SQLE-205ENST00000521232 LINC00614P0C842 121 aa10.38□□□□□ -0.75
SQLE-205ENST00000521232 C18orf32Q8TCD1 76 aa10.38□□□□□ -0.75
SQLE-205ENST00000521232 COX7B2Q8TF08 81 aa10.38□□□□□ -0.75
SQLE-205ENST00000521232 SNAPINO95295 136 aa10.37□□□□□ -0.75
SQLE-205ENST00000521232 UBE2BP63146 152 aa10.37□□□□□ -0.75
SQLE-205ENST00000521232 ODF1Q14990 250 aa10.37□□□□□ -0.75
SQLE-205ENST00000521232 SVBPQ8N300 66 aa10.37□□□□□ -0.75
SQLE-205ENST00000521232 DIRC1Q969H9 104 aa10.37□□□□□ -0.75
SQLE-205ENST00000521232 NDUFA5Q16718 116 aa10.36□□□□□ -0.75
SQLE-205ENST00000521232 XAGE1AQ9HD64 81 aa10.36□□□□□ -0.75
SQLE-205ENST00000521232 C22orf24Q9Y442 160 aa10.36□□□□□ -0.75
SQLE-205ENST00000521232 LRP2P98164 4655 aa10.36□□□□□ -0.75
SQLE-205ENST00000521232 SPINK8P0C7L1 97 aa10.35□□□□□ -0.75
SQLE-205ENST00000521232 H0Y9J4 135 aa10.34□□□□□ -0.75
SQLE-205ENST00000521232 IGLC3P0DOY3 106 aa10.34□□□□□ -0.75
SQLE-205ENST00000521232 H3BRM9 83 aa10.33□□□□□ -0.76
SQLE-205ENST00000521232 HBDP02042 147 aa10.33□□□□□ -0.76
SQLE-205ENST00000521232 LBHQ53QV2 105 aaPredicted RBP10.33□□□□□ -0.76
SQLE-205ENST00000521232 RAB5BP61020 215 aa10.32□□□□□ -0.76
SQLE-205ENST00000521232 YPEL4Q96NS1 127 aa10.32□□□□□ -0.76
SQLE-205ENST00000521232 TP73-AS1Q9UF72 201 aa10.32□□□□□ -0.76
SQLE-205ENST00000521232 NDUFA6P56556 154 aa10.31□□□□□ -0.76
SQLE-205ENST00000521232 IGLV5-39A0A0G2JS06 123 aa10.3□□□□□ -0.76
SQLE-205ENST00000521232 PMCHL1Q16048 86 aa10.3□□□□□ -0.76
SQLE-205ENST00000521232 NUPR1O60356 82 aa10.29□□□□□ -0.76
SQLE-205ENST00000521232 ATP5LO75964 103 aa10.29□□□□□ -0.76
SQLE-205ENST00000521232 ZNF22P17026 224 aaPredicted RBP10.29□□□□□ -0.76
SQLE-205ENST00000521232 MRPL55Q7Z7F7 128 aaKnown RBP10.29□□□□□ -0.76
SQLE-205ENST00000521232 ZNF861PO60384 105 aa10.27□□□□□ -0.77
SQLE-205ENST00000521232 KRTAP1-4P0C5Y4 121 aa10.27□□□□□ -0.77
SQLE-205ENST00000521232 BAGE3Q86Y29 109 aa10.27□□□□□ -0.77
SQLE-205ENST00000521232 PRR26Q8N8Z3 221 aa10.27□□□□□ -0.77
SQLE-205ENST00000521232 LINC00167Q96N53 147 aa10.26□□□□□ -0.77
SQLE-205ENST00000521232 IGLV5-37A0A075B6J1 123 aa10.25□□□□□ -0.77
SQLE-205ENST00000521232 C11orf86A6NJI1 115 aa10.25□□□□□ -0.77
SQLE-205ENST00000521232 CHCHD1Q96BP2 118 aaKnown RBP10.25□□□□□ -0.77
SQLE-205ENST00000521232 IGLV1-50A0A075B6I6 118 aa10.24□□□□□ -0.77
SQLE-205ENST00000521232 BCE1O60756 84 aa10.22□□□□□ -0.77
SQLE-205ENST00000521232 PFN2P35080 140 aa10.22□□□□□ -0.77
SQLE-205ENST00000521232 COX17Q14061 63 aa10.22□□□□□ -0.77
SQLE-205ENST00000521232 TMEM170BQ5T4T1 132 aa10.22□□□□□ -0.77
SQLE-205ENST00000521232 CHTOPQ9Y3Y2 248 aaKnown RBP10.22□□□□□ -0.77
SQLE-205ENST00000521232 TRAV12-1A0A0B4J245 112 aa10.21□□□□□ -0.77
SQLE-205ENST00000521232 RPL37AP8A6NKH3 93 aa10.21□□□□□ -0.77
SQLE-205ENST00000521232 ERG28Q9UKR5 140 aa10.21□□□□□ -0.77
SQLE-205ENST00000521232 SFTA2Q6UW10 78 aa10.2□□□□□ -0.78
SQLE-205ENST00000521232 CBLN2Q8IUK8 224 aa10.2□□□□□ -0.78
SQLE-205ENST00000521232 NKAPP1Q8N9T2 125 aa10.2□□□□□ -0.78
SQLE-205ENST00000521232 IFI27L1Q96BM0 104 aa10.2□□□□□ -0.78
SQLE-205ENST00000521232 GAGE10A6NGK3 116 aa10.19□□□□□ -0.78
SQLE-205ENST00000521232 RPL28P46779 137 aaKnown RBP10.19□□□□□ -0.78
SQLE-205ENST00000521232 SND1-IT1Q9HBX3 110 aa10.19□□□□□ -0.78
SQLE-205ENST00000521232 RPL13AP40429 203 aaKnown RBP10.18□□□□□ -0.78
SQLE-205ENST00000521232 ZNF625Q96I27 306 aaPredicted RBP10.18□□□□□ -0.78
SQLE-205ENST00000521232 TMEM223A0PJW6 202 aa10.17□□□□□ -0.78
SQLE-205ENST00000521232 VPREB1P12018 145 aa10.16□□□□□ -0.78
SQLE-205ENST00000521232 LPAP08519 4548 aa10.16□□□□□ -0.78
SQLE-205ENST00000521232 HSBP1O75506 76 aa10.15□□□□□ -0.78
SQLE-205ENST00000521232 SCO1O75880 301 aa10.15□□□□□ -0.78
SQLE-205ENST00000521232 TRGC2P03986 189 aa10.15□□□□□ -0.78
SQLE-205ENST00000521232 RPL24P83731 157 aaKnown RBP10.15□□□□□ -0.78
SQLE-205ENST00000521232 KRTAP13-1Q8IUC0 172 aa10.15□□□□□ -0.78
SQLE-205ENST00000521232 FAM19A2Q8N3H0 131 aa10.15□□□□□ -0.78
SQLE-205ENST00000521232 RNF213Q63HN8 5207 aa10.15□□□□□ -0.78
SQLE-205ENST00000521232 IGKV2-28A0A075B6P5 120 aa10.13□□□□□ -0.79
SQLE-205ENST00000521232 IGKV2D-28P01615 120 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms