RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 UBE2L6O14933 153 aa5.36□□□□□ -1.55
CTHRC1-203ENST00000520337 RNASE13Q5GAN3 156 aaKnown RBP5.36□□□□□ -1.55
CTHRC1-203ENST00000520337 LELP1Q5T871 98 aa5.36□□□□□ -1.55
CTHRC1-203ENST00000520337 CHCHD5Q9BSY4 110 aa5.36□□□□□ -1.55
CTHRC1-203ENST00000520337 IGLV4-60A0A075B6I1 120 aa5.35□□□□□ -1.55
CTHRC1-203ENST00000520337 A0A1B0GUV1 79 aa5.35□□□□□ -1.55
CTHRC1-203ENST00000520337 ZNF815PA8K554 130 aa5.35□□□□□ -1.55
CTHRC1-203ENST00000520337 SRSF9Q13242 221 aaKnown RBP eCLIP5.35□□□□□ -1.55
CTHRC1-203ENST00000520337 ESRGQ1W209 222 aa5.35□□□□□ -1.55
CTHRC1-203ENST00000520337 DGAT2L7PQ6IED9 249 aa5.35□□□□□ -1.55
CTHRC1-203ENST00000520337 SCGB1D4Q6XE38 83 aa5.35□□□□□ -1.55
CTHRC1-203ENST00000520337 A0A0J9YXV3 536 aa5.34□□□□□ -1.55
CTHRC1-203ENST00000520337 PRYO14603 147 aa5.34□□□□□ -1.55
CTHRC1-203ENST00000520337 SMAGPQ0VAQ4 97 aa5.34□□□□□ -1.55
CTHRC1-203ENST00000520337 ETDBQ3ZM63 59 aa5.34□□□□□ -1.55
CTHRC1-203ENST00000520337 NFE4Q86UQ8 179 aa5.34□□□□□ -1.55
CTHRC1-203ENST00000520337 C15orf53Q8NAA6 179 aa5.34□□□□□ -1.55
CTHRC1-203ENST00000520337 TMEM262E9PQX1 116 aa5.33□□□□□ -1.56
CTHRC1-203ENST00000520337 APOMO95445 188 aa5.33□□□□□ -1.56
CTHRC1-203ENST00000520337 FAM19A3Q7Z5A8 133 aa5.33□□□□□ -1.56
CTHRC1-203ENST00000520337 PPDPFLQ8WWR9 84 aa5.33□□□□□ -1.56
CTHRC1-203ENST00000520337 TMEM101Q96IK0 257 aa5.33□□□□□ -1.56
CTHRC1-203ENST00000520337 LINC01600Q96MT4 127 aa5.33□□□□□ -1.56
CTHRC1-203ENST00000520337 DYNC2H1Q8NCM8 4307 aaKnown RBP5.32□□□□□ -1.56
CTHRC1-203ENST00000520337 TINCRA0A1B0GVN0 87 aa5.32□□□□□ -1.56
CTHRC1-203ENST00000520337 LEPROTO15243 131 aa5.32□□□□□ -1.56
CTHRC1-203ENST00000520337 COX6A2Q02221 97 aa5.32□□□□□ -1.56
CTHRC1-203ENST00000520337 LINC00242Q5T6M2 205 aa5.32□□□□□ -1.56
CTHRC1-203ENST00000520337 KRTAP5-11Q6L8G4 156 aa5.32□□□□□ -1.56
CTHRC1-203ENST00000520337 WFDC10BQ8IUB3 73 aa5.32□□□□□ -1.56
CTHRC1-203ENST00000520337 PLEKHB2Q96CS7 222 aa5.32□□□□□ -1.56
CTHRC1-203ENST00000520337 IGLV5-45A0A087WSX0 123 aa5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 TSPAN13O95857 204 aa5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 IGHV3-30P01768 117 aa5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 IGHV3-30-5P0DP03 117 aa5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 ZNF22P17026 224 aaPredicted RBP5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 TEN1Q86WV5 123 aa5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 C10orf126Q8N4M7 172 aa5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 PRO1854Q9UHT4 67 aa5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 APLNQ9ULZ1 77 aa5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 LINC00588Q9Y4M8 146 aa5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 DNAH7Q8WXX0 4024 aa5.31□□□□□ -1.56
CTHRC1-203ENST00000520337 TRAV13-1A0A0B4J241 112 aa5.3□□□□□ -1.56
CTHRC1-203ENST00000520337 A0A0B4J2C4 111 aa5.3□□□□□ -1.56
CTHRC1-203ENST00000520337 LOC107984156A0A0G2JMH3 177 aa5.3□□□□□ -1.56
CTHRC1-203ENST00000520337 LINC00959A0A1B0GUT2 108 aa5.3□□□□□ -1.56
CTHRC1-203ENST00000520337 TMEM223A0PJW6 202 aa5.3□□□□□ -1.56
CTHRC1-203ENST00000520337 J3QQQ9 107 aa5.3□□□□□ -1.56
CTHRC1-203ENST00000520337 LGALS3P17931 250 aaKnown RBP5.3□□□□□ -1.56
CTHRC1-203ENST00000520337 PSMB2P49721 201 aa5.3□□□□□ -1.56
CTHRC1-203ENST00000520337 ARL17AQ8IVW1 177 aa5.3□□□□□ -1.56
CTHRC1-203ENST00000520337 LINC00269Q8N2A0 174 aa5.3□□□□□ -1.56
CTHRC1-203ENST00000520337 TGP01266 2768 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 CSMD3Q7Z407 3707 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 IGKV3OR2-268A0A0C4DH90 116 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 IGHV3-33P01772 117 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 CFC1BP0CG36 223 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 CFC1P0CG37 223 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 DNAH10OSP0CZ25 163 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 IGHV3-30-3P0DP02 117 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 HERVK_113P63121 156 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 TMEM170BQ5T4T1 132 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 C10orf25Q5T742 122 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 PRR34Q9NV39 138 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 CDKN2A-AS1Q9UH64 79 aa5.29□□□□□ -1.56
CTHRC1-203ENST00000520337 IGHV3OR16-9A0A0B4J2B5 98 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 NUPR2A6NF83 97 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 ANGP03950 147 aaKnown RBP5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 SCGB1C2P0DMR2 95 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 CCL18P55774 89 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 KRTAP10-7P60409 375 aaPredicted RBP5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 CKS1BP61024 79 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 REG3AQ06141 175 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 LINC01556Q5JQF7 62 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 CLPSL2Q6UWE3 100 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 ENHOQ6UWT2 76 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 UPK3BQ9BT76 320 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 GEMIN7Q9H840 131 aaKnown RBP5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 KLK12Q9UKR0 248 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 ERG28Q9UKR5 140 aa5.28□□□□□ -1.56
CTHRC1-203ENST00000520337 TENM2Q9NT68 2774 aa5.27□□□□□ -1.57
CTHRC1-203ENST00000520337 TCL1BO95988 128 aa5.27□□□□□ -1.57
CTHRC1-203ENST00000520337 TSPEAR-AS2P59090 65 aa5.27□□□□□ -1.57
CTHRC1-203ENST00000520337 KLK5Q9Y337 293 aaPredicted RBP5.27□□□□□ -1.57
CTHRC1-203ENST00000520337 TRAV8-3A0A0A6YYJ7 113 aa5.26□□□□□ -1.57
CTHRC1-203ENST00000520337 IGHV1-58A0A0C4DH39 117 aa5.26□□□□□ -1.57
CTHRC1-203ENST00000520337 IGLV5-39A0A0G2JS06 123 aa5.26□□□□□ -1.57
CTHRC1-203ENST00000520337 TRBV30A0A0K0K1B3 111 aa5.26□□□□□ -1.57
CTHRC1-203ENST00000520337 SPINK8P0C7L1 97 aa5.26□□□□□ -1.57
CTHRC1-203ENST00000520337 SS18Q15532 418 aa5.26□□□□□ -1.57
CTHRC1-203ENST00000520337 ATXN8Q156A1 80 aa5.26□□□□□ -1.57
CTHRC1-203ENST00000520337 KRTAP26-1Q6PEX3 210 aa5.26□□□□□ -1.57
CTHRC1-203ENST00000520337 CARD19Q96LW7 228 aa5.26□□□□□ -1.57
CTHRC1-203ENST00000520337 IGHV3-64A0A075B6Q5 118 aa5.25□□□□□ -1.57
CTHRC1-203ENST00000520337 A0A087WZ39 114 aa5.25□□□□□ -1.57
CTHRC1-203ENST00000520337 A0A0J9YXY3 114 aa5.25□□□□□ -1.57
CTHRC1-203ENST00000520337 SMIM1B2RUZ4 78 aa5.25□□□□□ -1.57
CTHRC1-203ENST00000520337 SLC25A20O43772 301 aa5.25□□□□□ -1.57
CTHRC1-203ENST00000520337 TIMM17BO60830 172 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms