RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CDC42BPGQ6DT37 1551 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 WIZO95785 1651 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 HMGN4O00479 90 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 ARMS2P0C7Q2 107 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 PRB4P10163 310 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 HMGA1P17096 107 aaKnown RBP1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 IFI27P40305 119 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 FAM74A4Q5TZK3 123 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 CSAG1Q6PB30 78 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 NDUFA4L2Q9NRX3 87 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 R4GMQ9 66 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 EHBP1L1Q8N3D4 1523 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 LRRC7Q96NW7 1537 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 USP32Q8NFA0 1604 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 PHRF1Q9P1Y6 1649 aaKnown RBP1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 PRXQ9BXM0 1461 aa1.43□□□□□ -2.18
HMGB1P46-201ENST00000520062 BIVM-ERCC5R4GMW8 1640 aa1.42□□□□□ -2.18
HMGB1P46-201ENST00000520062 D6R8Y8 96 aa1.42□□□□□ -2.18
HMGB1P46-201ENST00000520062 LEPROTL1O95214 131 aa1.42□□□□□ -2.18
HMGB1P46-201ENST00000520062 SPAG11BQ08648 103 aa1.42□□□□□ -2.18
HMGB1P46-201ENST00000520062 SPAG11AQ6PDA7 123 aa1.42□□□□□ -2.18
HMGB1P46-201ENST00000520062 BAGE3Q86Y29 109 aa1.42□□□□□ -2.18
HMGB1P46-201ENST00000520062 BAGE2Q86Y30 109 aa1.42□□□□□ -2.18
HMGB1P46-201ENST00000520062 MUSTN1Q8IVN3 82 aa1.42□□□□□ -2.18
HMGB1P46-201ENST00000520062 CDC42BPAQ5VT25 1732 aa1.42□□□□□ -2.18
HMGB1P46-201ENST00000520062 AHCTF1Q8WYP5 2266 aa1.42□□□□□ -2.18
HMGB1P46-201ENST00000520062 TNCP24821 2201 aa1.42□□□□□ -2.18
HMGB1P46-201ENST00000520062 KIAA0556O60303 1618 aa1.41□□□□□ -2.18
HMGB1P46-201ENST00000520062 ZNF236Q9UL36 1845 aa1.41□□□□□ -2.18
HMGB1P46-201ENST00000520062 PPP1R17O96001 155 aa1.41□□□□□ -2.18
HMGB1P46-201ENST00000520062 PSENENQ9NZ42 101 aa1.41□□□□□ -2.18
HMGB1P46-201ENST00000520062 GNG13Q9P2W3 67 aa1.41□□□□□ -2.18
HMGB1P46-201ENST00000520062 UBE2D4Q9Y2X8 147 aa1.41□□□□□ -2.18
HMGB1P46-201ENST00000520062 ARL2-SNX15V9GYD0 113 aa1.41□□□□□ -2.18
HMGB1P46-201ENST00000520062 ARHGEF5Q12774 1597 aa1.41□□□□□ -2.18
HMGB1P46-201ENST00000520062 C3P01024 1663 aa1.41□□□□□ -2.18
HMGB1P46-201ENST00000520062 SCN7AQ01118 1682 aa1.41□□□□□ -2.18
HMGB1P46-201ENST00000520062 ALKQ9UM73 1620 aa1.4□□□□□ -2.18
HMGB1P46-201ENST00000520062 RICTORQ6R327 1708 aa1.4□□□□□ -2.18
HMGB1P46-201ENST00000520062 CD163L1Q9NR16 1453 aa1.4□□□□□ -2.19
HMGB1P46-201ENST00000520062 FAM223BA6NKX1 122 aa1.4□□□□□ -2.19
HMGB1P46-201ENST00000520062 TFF1P04155 84 aa1.4□□□□□ -2.19
HMGB1P46-201ENST00000520062 CCL3L1P16619 93 aa1.4□□□□□ -2.19
HMGB1P46-201ENST00000520062 ATXN8Q156A1 80 aa1.4□□□□□ -2.19
HMGB1P46-201ENST00000520062 SFTA2Q6UW10 78 aa1.4□□□□□ -2.19
HMGB1P46-201ENST00000520062 DEFB132Q7Z7B7 95 aa1.4□□□□□ -2.19
HMGB1P46-201ENST00000520062 COX7B2Q8TF08 81 aa1.4□□□□□ -2.19
HMGB1P46-201ENST00000520062 LINC00846Q9NV44 126 aa1.4□□□□□ -2.19
HMGB1P46-201ENST00000520062 TJP1Q07157 1748 aa1.4□□□□□ -2.19
HMGB1P46-201ENST00000520062 FMN2Q9NZ56 1722 aa1.4□□□□□ -2.19
HMGB1P46-201ENST00000520062 PAPPA2Q9BXP8 1791 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 C5P01031 1676 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 FXYD6-FXYD2A0A087WZ82 144 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 CLPSL1A2RUU4 121 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 F8VRH5 84 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 UQCR11O14957 56 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 NDUFB1O75438 58 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 FXYD4P59646 89 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 FXYD6Q9H0Q3 95 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 LINC01558Q9Y6Z2 57 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 ABCA1O95477 2261 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 KMT2BQ9UMN6 2715 aaPredicted RBP1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 NHSL1Q5SYE7 1610 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 ANKRD50Q9ULJ7 1429 aa1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 ASCC3Q8N3C0 2202 aaKnown RBP1.39□□□□□ -2.19
HMGB1P46-201ENST00000520062 MRC1P22897 1456 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 ATP7BP35670 1465 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 KNTC1P50748 2209 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 ABCA5Q8WWZ7 1642 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 ADCY10Q96PN6 1610 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 H3BVH4 76 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 MGPP08493 103 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 HILPDAQ9Y5L2 63 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 V9GYV3 84 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 KIAA0586Q9BVV6 1533 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 IQGAP2Q13576 1575 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 ERCC6L2Q5T890 1561 aa1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 CEP170BQ9Y4F5 1589 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P46-201ENST00000520062 LY75O60449 1722 aa1.37□□□□□ -2.19
HMGB1P46-201ENST00000520062 URB1O60287 2271 aaKnown RBP1.37□□□□□ -2.19
HMGB1P46-201ENST00000520062 CCL18P55774 89 aa1.37□□□□□ -2.19
HMGB1P46-201ENST00000520062 FAM103A1Q9BTL3 118 aaKnown RBP1.37□□□□□ -2.19
HMGB1P46-201ENST00000520062 PRR15LQ9BU68 103 aa1.37□□□□□ -2.19
HMGB1P46-201ENST00000520062 ANKRD17O75179 2603 aaKnown RBP1.37□□□□□ -2.19
HMGB1P46-201ENST00000520062 F5P12259 2224 aa1.37□□□□□ -2.19
HMGB1P46-201ENST00000520062 ROS1P08922 2347 aa1.37□□□□□ -2.19
HMGB1P46-201ENST00000520062 TRBV7-4A0A0J9YYF1 115 aa1.36□□□□□ -2.19
HMGB1P46-201ENST00000520062 A0A1B0GUT8 65 aa1.36□□□□□ -2.19
HMGB1P46-201ENST00000520062 C10orf142B7Z368 130 aa1.36□□□□□ -2.19
HMGB1P46-201ENST00000520062 M0R135 149 aa1.36□□□□□ -2.19
HMGB1P46-201ENST00000520062 SPINT3P49223 89 aa1.36□□□□□ -2.19
HMGB1P46-201ENST00000520062 RPL37AP61513 92 aaKnown RBP1.36□□□□□ -2.19
HMGB1P46-201ENST00000520062 SMIM4Q8WVI0 70 aa1.36□□□□□ -2.19
HMGB1P46-201ENST00000520062 CADP27708 2225 aa1.36□□□□□ -2.19
HMGB1P46-201ENST00000520062 GOLGA4Q13439 2230 aaKnown RBP1.36□□□□□ -2.19
HMGB1P46-201ENST00000520062 NESP48681 1621 aa1.36□□□□□ -2.19
HMGB1P46-201ENST00000520062 EIF2AK4Q9P2K8 1649 aaKnown RBP1.36□□□□□ -2.19
HMGB1P46-201ENST00000520062 TRBV30A0A0K0K1B3 111 aa1.35□□□□□ -2.19
HMGB1P46-201ENST00000520062 ZNF137PP52743 207 aa1.35□□□□□ -2.19
HMGB1P46-201ENST00000520062 COX17Q14061 63 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms