RNA–Protein interactions for RNA: ENST00000519222.5

CSGALNACT1-207, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 2

Gene CSGALNACT1, Length 2,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-207ENST00000519222 CHCHD10Q8WYQ3 142 aaPredicted RBP12.28□□□□□ -0.44
CSGALNACT1-207ENST00000519222 KPRPQ5T749 579 aaPredicted RBP12.28□□□□□ -0.44
CSGALNACT1-207ENST00000519222 MIR7-3HGQ8N6C7 128 aa12.28□□□□□ -0.44
CSGALNACT1-207ENST00000519222 MRAPQ8TCY5 172 aa12.28□□□□□ -0.44
CSGALNACT1-207ENST00000519222 TRIAP1O43715 76 aa12.27□□□□□ -0.44
CSGALNACT1-207ENST00000519222 LINC00158P58513 81 aa12.27□□□□□ -0.44
CSGALNACT1-207ENST00000519222 KLK12Q9UKR0 248 aa12.27□□□□□ -0.44
CSGALNACT1-207ENST00000519222 TEX48A0A1B0GUV7 120 aa12.27□□□□□ -0.45
CSGALNACT1-207ENST00000519222 RPL13AP40429 203 aaKnown RBP12.26□□□□□ -0.45
CSGALNACT1-207ENST00000519222 SMCPP49901 116 aaPredicted RBP12.26□□□□□ -0.45
CSGALNACT1-207ENST00000519222 DEFB121Q5J5C9 76 aa12.25□□□□□ -0.45
CSGALNACT1-207ENST00000519222 K7ERU9 68 aa12.25□□□□□ -0.45
CSGALNACT1-207ENST00000519222 LYRM7Q5U5X0 104 aa12.25□□□□□ -0.45
CSGALNACT1-207ENST00000519222 CD164L2Q6UWJ8 174 aa12.24□□□□□ -0.45
CSGALNACT1-207ENST00000519222 VPS25Q9BRG1 176 aa12.23□□□□□ -0.45
CSGALNACT1-207ENST00000519222 TRBV20-1A0A075B6N2 111 aa12.23□□□□□ -0.45
CSGALNACT1-207ENST00000519222 COX7A2LO14548 114 aa12.23□□□□□ -0.45
CSGALNACT1-207ENST00000519222 MALP21145 153 aa12.23□□□□□ -0.45
CSGALNACT1-207ENST00000519222 WFDC10BQ8IUB3 73 aa12.23□□□□□ -0.45
CSGALNACT1-207ENST00000519222 C11orf45Q8TAV5 145 aa12.23□□□□□ -0.45
CSGALNACT1-207ENST00000519222 TRBV30A0A0K0K1B3 111 aa12.21□□□□□ -0.45
CSGALNACT1-207ENST00000519222 LINC00526Q96FQ7 95 aa12.21□□□□□ -0.45
CSGALNACT1-207ENST00000519222 DEFB131BA0A096LNP1 70 aa12.2□□□□□ -0.46
CSGALNACT1-207ENST00000519222 ENHOQ6UWT2 76 aa12.2□□□□□ -0.46
CSGALNACT1-207ENST00000519222 CLEC2BQ92478 149 aa12.2□□□□□ -0.46
CSGALNACT1-207ENST00000519222 GAGE12HA6NDE8 117 aa12.2□□□□□ -0.46
CSGALNACT1-207ENST00000519222 CKS1BP61024 79 aa12.2□□□□□ -0.46
CSGALNACT1-207ENST00000519222 FOXI1Q12951 378 aa12.19□□□□□ -0.46
CSGALNACT1-207ENST00000519222 Q8IZM0 81 aa12.19□□□□□ -0.46
CSGALNACT1-207ENST00000519222 UBE2WQ96B02 151 aa12.19□□□□□ -0.46
CSGALNACT1-207ENST00000519222 C9JAW5 83 aa12.19□□□□□ -0.46
CSGALNACT1-207ENST00000519222 K7EIL1 84 aa12.19□□□□□ -0.46
CSGALNACT1-207ENST00000519222 ESRGQ1W209 222 aa12.19□□□□□ -0.46
CSGALNACT1-207ENST00000519222 IBA57-AS1B1ANH7 110 aa12.18□□□□□ -0.46
CSGALNACT1-207ENST00000519222 KIAA0087Q14695 138 aa12.18□□□□□ -0.46
CSGALNACT1-207ENST00000519222 C9orf116Q5BN46 136 aaPredicted RBP12.18□□□□□ -0.46
CSGALNACT1-207ENST00000519222 SND1-IT1Q9HBX3 110 aa12.18□□□□□ -0.46
CSGALNACT1-207ENST00000519222 CCL18P55774 89 aa12.18□□□□□ -0.46
CSGALNACT1-207ENST00000519222 COPS9Q8WXC6 57 aa12.18□□□□□ -0.46
CSGALNACT1-207ENST00000519222 HUWE1Q7Z6Z7 4374 aaKnown RBP12.17□□□□□ -0.46
CSGALNACT1-207ENST00000519222 C6orf223Q8N319 242 aa12.17□□□□□ -0.46
CSGALNACT1-207ENST00000519222 MDFIQ99750 246 aa12.17□□□□□ -0.46
CSGALNACT1-207ENST00000519222 PRR34Q9NV39 138 aa12.16□□□□□ -0.46
CSGALNACT1-207ENST00000519222 IGKV2-28A0A075B6P5 120 aa12.15□□□□□ -0.46
CSGALNACT1-207ENST00000519222 IGKV2D-28P01615 120 aa12.15□□□□□ -0.46
CSGALNACT1-207ENST00000519222 CFAP161Q6P656 301 aa12.15□□□□□ -0.46
CSGALNACT1-207ENST00000519222 H3BNG1 76 aa12.15□□□□□ -0.46
CSGALNACT1-207ENST00000519222 COX6CP09669 75 aa12.15□□□□□ -0.46
CSGALNACT1-207ENST00000519222 ATXN8Q156A1 80 aa12.15□□□□□ -0.46
CSGALNACT1-207ENST00000519222 LINC00337Q8N6G1 96 aa12.15□□□□□ -0.46
CSGALNACT1-207ENST00000519222 SLC25A20O43772 301 aa12.14□□□□□ -0.47
CSGALNACT1-207ENST00000519222 CRPP02741 224 aa12.14□□□□□ -0.47
CSGALNACT1-207ENST00000519222 LINC01620Q4KN68 170 aa12.13□□□□□ -0.47
CSGALNACT1-207ENST00000519222 C10orf25Q5T742 122 aa12.13□□□□□ -0.47
CSGALNACT1-207ENST00000519222 SPATA25Q9BR10 227 aa12.12□□□□□ -0.47
CSGALNACT1-207ENST00000519222 LINC01561Q8N1V8 128 aa12.12□□□□□ -0.47
CSGALNACT1-207ENST00000519222 PRR3P79522 188 aaKnown RBP12.11□□□□□ -0.47
CSGALNACT1-207ENST00000519222 UNQ6190/PRO20217Q6UXQ8 127 aa12.11□□□□□ -0.47
CSGALNACT1-207ENST00000519222 SPAG11BQ08648 103 aa12.1□□□□□ -0.47
CSGALNACT1-207ENST00000519222 TM2D3Q9BRN9 247 aa12.1□□□□□ -0.47
CSGALNACT1-207ENST00000519222 COL7A1Q02388 2944 aa12.1□□□□□ -0.47
CSGALNACT1-207ENST00000519222 ANKRD29Q8N6D5 301 aa12.1□□□□□ -0.47
CSGALNACT1-207ENST00000519222 TEN1Q86WV5 123 aa12.08□□□□□ -0.48
CSGALNACT1-207ENST00000519222 LYSTQ99698 3801 aa12.08□□□□□ -0.48
CSGALNACT1-207ENST00000519222 TRAV13-2A0A0B4J235 113 aa12.07□□□□□ -0.48
CSGALNACT1-207ENST00000519222 LST1O00453 97 aa12.07□□□□□ -0.48
CSGALNACT1-207ENST00000519222 OR13C6PQ8NH95 151 aa12.07□□□□□ -0.48
CSGALNACT1-207ENST00000519222 CARD19Q96LW7 228 aa12.07□□□□□ -0.48
CSGALNACT1-207ENST00000519222 KLK5Q9Y337 293 aaPredicted RBP12.07□□□□□ -0.48
CSGALNACT1-207ENST00000519222 CXCL5P42830 114 aa12.05□□□□□ -0.48
CSGALNACT1-207ENST00000519222 HIGD2BQ4VC39 106 aa12.05□□□□□ -0.48
CSGALNACT1-207ENST00000519222 SMIM11BQ8TCY0 68 aa12.05□□□□□ -0.48
CSGALNACT1-207ENST00000519222 PPDPFQ9H3Y8 114 aa12.05□□□□□ -0.48
CSGALNACT1-207ENST00000519222 STAB2Q8WWQ8 2551 aa12.04□□□□□ -0.48
CSGALNACT1-207ENST00000519222 TRAV8-4A0A0B4J246 113 aa12.04□□□□□ -0.48
CSGALNACT1-207ENST00000519222 TRBV10-2A0A0K0K1G8 114 aa12.04□□□□□ -0.48
CSGALNACT1-207ENST00000519222 FAM218AQ96MZ4 157 aa12.04□□□□□ -0.48
CSGALNACT1-207ENST00000519222 J3QR89 54 aa12.04□□□□□ -0.48
CSGALNACT1-207ENST00000519222 TRAV10A0A0B4J240 114 aa12.03□□□□□ -0.48
CSGALNACT1-207ENST00000519222 NTN5Q8WTR8 489 aaPredicted RBP12.03□□□□□ -0.48
CSGALNACT1-207ENST00000519222 Q9HAA7 133 aa12.03□□□□□ -0.48
CSGALNACT1-207ENST00000519222 TEX49A0A1B0GTD5 131 aa12.02□□□□□ -0.49
CSGALNACT1-207ENST00000519222 Q8NDZ9 215 aa12.02□□□□□ -0.49
CSGALNACT1-207ENST00000519222 COX17Q14061 63 aa12.01□□□□□ -0.49
CSGALNACT1-207ENST00000519222 IGKV2D-24A0A075B6R9 120 aa12.01□□□□□ -0.49
CSGALNACT1-207ENST00000519222 KRTAP26-1Q6PEX3 210 aa12.01□□□□□ -0.49
CSGALNACT1-207ENST00000519222 PPDPFLQ8WWR9 84 aa12.01□□□□□ -0.49
CSGALNACT1-207ENST00000519222 RPL28P46779 137 aaKnown RBP12□□□□□ -0.49
CSGALNACT1-207ENST00000519222 LINC01556Q5JQF7 62 aa11.99□□□□□ -0.49
CSGALNACT1-207ENST00000519222 LINC00588Q9Y4M8 146 aa11.99□□□□□ -0.49
CSGALNACT1-207ENST00000519222 ZNF561-AS1K7EIQ3 104 aa11.98□□□□□ -0.49
CSGALNACT1-207ENST00000519222 C1orf43Q9BWL3 253 aa11.98□□□□□ -0.49
CSGALNACT1-207ENST00000519222 C6orf48Q9UBA6 75 aa11.98□□□□□ -0.49
CSGALNACT1-207ENST00000519222 NCR3O14931 201 aa11.98□□□□□ -0.49
CSGALNACT1-207ENST00000519222 DNAH9Q9NYC9 4486 aa11.97□□□□□ -0.49
CSGALNACT1-207ENST00000519222 XAGE1AQ9HD64 81 aa11.97□□□□□ -0.49
CSGALNACT1-207ENST00000519222 A0A087WYN8 130 aa11.96□□□□□ -0.49
CSGALNACT1-207ENST00000519222 C15orf56Q8N910 161 aa11.96□□□□□ -0.5
CSGALNACT1-207ENST00000519222 CAMK2N2Q96S95 79 aa11.95□□□□□ -0.5
CSGALNACT1-207ENST00000519222 M0QXV9 152 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms