RNA–Protein interactions for RNA: ENST00000518756.1

HDAC2-204, Transcript of histone deacetylase 2, humanhuman

TSL 3

Gene HDAC2, Length 826 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-204ENST00000518756 Q6Q795 121 aa3.59□□□□□ -1.83
HDAC2-204ENST00000518756 LINC00308Q8TCZ7 52 aa3.59□□□□□ -1.83
HDAC2-204ENST00000518756 LAMTOR3Q9UHA4 124 aa3.59□□□□□ -1.83
HDAC2-204ENST00000518756 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 PRRC2AP48634 2157 aaKnown RBP3.58□□□□□ -1.84
HDAC2-204ENST00000518756 COL6A6A6NMZ7 2263 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 ABCA2Q9BZC7 2435 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 H0YGX0 51 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 IGLV1-51P01701 117 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 TRACP01848 142 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 NPC2P61916 151 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 Q6ZTI0 123 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 LINC01006Q8NI28 216 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 COX7B2Q8TF08 81 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 ANAPC13Q9BS18 74 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 CHCHD5Q9BSY4 110 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 HRNRQ86YZ3 2850 aaPredicted RBP3.58□□□□□ -1.84
HDAC2-204ENST00000518756 HIVEP3Q5T1R4 2406 aa3.58□□□□□ -1.84
HDAC2-204ENST00000518756 LAMA5O15230 3695 aa3.57□□□□□ -1.84
HDAC2-204ENST00000518756 IGLV7-46A0A075B6I9 117 aa3.57□□□□□ -1.84
HDAC2-204ENST00000518756 TRBV6-8A0A0A6YYG3 113 aa3.57□□□□□ -1.84
HDAC2-204ENST00000518756 IBA57-AS1B1ANH7 110 aa3.57□□□□□ -1.84
HDAC2-204ENST00000518756 LINC00158P58513 81 aa3.57□□□□□ -1.84
HDAC2-204ENST00000518756 C2orf48Q96LS8 159 aa3.57□□□□□ -1.84
HDAC2-204ENST00000518756 TLN1Q9Y490 2541 aaKnown RBP3.56□□□□□ -1.84
HDAC2-204ENST00000518756 SPTA1P02549 2419 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 IGHV3OR16-9A0A0B4J2B5 98 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 PRM2P04554 102 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 CXCL5P42830 114 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 DAD1P61803 113 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 COX6A2Q02221 97 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 DEFB121Q5J5C9 76 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 C9orf66Q5T8R8 295 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 WFDC11Q8NEX6 87 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 FAM104AQ969W3 186 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 IMUPQ9GZP8 106 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 TOMM7Q9P0U1 55 aa3.56□□□□□ -1.84
HDAC2-204ENST00000518756 SPTBN2O15020 2390 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.55□□□□□ -1.84
HDAC2-204ENST00000518756 TEX49A0A1B0GTD5 131 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 J3QKU1 62 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 MT-ATP8P03928 68 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 LINC00694P0DN24 101 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 RPL28P46779 137 aaKnown RBP3.55□□□□□ -1.84
HDAC2-204ENST00000518756 NTM-AS1Q6ZSK4 140 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 MUC7Q8TAX7 377 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 CLEC2BQ92478 149 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 ZNF625Q96I27 306 aaPredicted RBP3.55□□□□□ -1.84
HDAC2-204ENST00000518756 SND1-IT1Q9HBX3 110 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 PRO0255Q9UI72 69 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 PKIGQ9Y2B9 76 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 DCHS1Q96JQ0 3298 aa3.55□□□□□ -1.84
HDAC2-204ENST00000518756 TACC2O95359 2948 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 DCHS2Q6V1P9 2916 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 IGKV3OR2-268A0A0C4DH90 116 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 H3BQ85 93 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 ATP5G1P05496 136 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 BAALC-AS2P0C853 105 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 COX17Q14061 63 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 S100A7L2Q5SY68 101 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 Q8IZM0 81 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 MIR7-3HGQ8N6C7 128 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 DAND5Q8N907 189 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 C15orf53Q8NAA6 179 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 CSNK1G2-AS1Q8NCQ2 148 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 NACAE9PAV3 2078 aa3.54□□□□□ -1.84
HDAC2-204ENST00000518756 FAM236DA0A1B0GTK5 79 aa3.53□□□□□ -1.84
HDAC2-204ENST00000518756 LINC00959A0A1B0GUT2 108 aa3.53□□□□□ -1.84
HDAC2-204ENST00000518756 FAM236CP0DP71 79 aa3.53□□□□□ -1.84
HDAC2-204ENST00000518756 DEFB130BP0DP73 79 aa3.53□□□□□ -1.84
HDAC2-204ENST00000518756 DEFB130AP0DP74 79 aa3.53□□□□□ -1.84
HDAC2-204ENST00000518756 LINC00643Q86TS7 51 aa3.53□□□□□ -1.84
HDAC2-204ENST00000518756 MED13LQ71F56 2210 aa3.53□□□□□ -1.84
HDAC2-204ENST00000518756 SPTBN1Q01082 2364 aaKnown RBP3.52□□□□□ -1.85
HDAC2-204ENST00000518756 PLAC8L1A1L4L8 177 aa3.52□□□□□ -1.85
HDAC2-204ENST00000518756 H0Y9J4 135 aa3.52□□□□□ -1.85
HDAC2-204ENST00000518756 NDUFS5O43920 106 aa3.52□□□□□ -1.85
HDAC2-204ENST00000518756 MIFP14174 115 aa3.52□□□□□ -1.85
HDAC2-204ENST00000518756 NDUFV3P56181 108 aaKnown RBP3.52□□□□□ -1.85
HDAC2-204ENST00000518756 LINC00612Q8N6U2 182 aa3.52□□□□□ -1.85
HDAC2-204ENST00000518756 ORMDL1Q9P0S3 153 aa3.52□□□□□ -1.85
HDAC2-204ENST00000518756 TRBV7-7A0A0K0K1E9 115 aa3.51□□□□□ -1.85
HDAC2-204ENST00000518756 JMJD7-PLA2G4BH0Y9G9 81 aa3.51□□□□□ -1.85
HDAC2-204ENST00000518756 TMEM256-PLSCR3K7ERE1 68 aa3.51□□□□□ -1.85
HDAC2-204ENST00000518756 GIG44P09565 113 aaPredicted RBP3.51□□□□□ -1.85
HDAC2-204ENST00000518756 SPART-AS1P0CW21 52 aa3.51□□□□□ -1.85
HDAC2-204ENST00000518756 DSCR10P59022 87 aa3.51□□□□□ -1.85
HDAC2-204ENST00000518756 C5orf38Q86SI9 138 aa3.51□□□□□ -1.85
HDAC2-204ENST00000518756 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.51□□□□□ -1.85
HDAC2-204ENST00000518756 DOPEY2Q9Y3R5 2298 aa3.51□□□□□ -1.85
HDAC2-204ENST00000518756 IGLV4-60A0A075B6I1 120 aa3.5□□□□□ -1.85
HDAC2-204ENST00000518756 PSPHP1O15172 72 aa3.5□□□□□ -1.85
HDAC2-204ENST00000518756 ANGP03950 147 aaKnown RBP3.5□□□□□ -1.85
HDAC2-204ENST00000518756 XCL1P47992 114 aa3.5□□□□□ -1.85
HDAC2-204ENST00000518756 CCL18P55774 89 aa3.5□□□□□ -1.85
HDAC2-204ENST00000518756 PRR3P79522 188 aaKnown RBP3.5□□□□□ -1.85
HDAC2-204ENST00000518756 SOSTDC1Q6X4U4 206 aa3.5□□□□□ -1.85
HDAC2-204ENST00000518756 SMIM11BQ8TCY0 68 aa3.5□□□□□ -1.85
HDAC2-204ENST00000518756 C8orf87E5RJ46 101 aa3.49□□□□□ -1.85
HDAC2-204ENST00000518756 REG3AQ06141 175 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms