RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 TIMM17BO60830 172 aa5.56□□□□□ -1.52
CCL28-204ENST00000514421 COX6A2Q02221 97 aa5.56□□□□□ -1.52
CCL28-204ENST00000514421 GAGE6Q13070 117 aa5.56□□□□□ -1.52
CCL28-204ENST00000514421 AMMECR1LQ6DCA0 310 aa5.56□□□□□ -1.52
CCL28-204ENST00000514421 LINC00469Q8N7U9 141 aa5.56□□□□□ -1.52
CCL28-204ENST00000514421 HIST1H4GQ99525 98 aa5.56□□□□□ -1.52
CCL28-204ENST00000514421 Q9HAA7 133 aa5.56□□□□□ -1.52
CCL28-204ENST00000514421 CDKN2A-AS1Q9UH64 79 aa5.56□□□□□ -1.52
CCL28-204ENST00000514421 KLK12Q9UKR0 248 aa5.56□□□□□ -1.52
CCL28-204ENST00000514421 PKD1P98161 4303 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 IGLV4-60A0A075B6I1 120 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 C9orf118A6NHY6 69 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 SMIM1B2RUZ4 78 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 PSCAO43653 123 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 GCSHP23434 173 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 RBX1P62877 108 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 SCGB1D4Q6XE38 83 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 UBE2WQ96B02 151 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 RMI2Q96E14 147 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 LITAFQ99732 161 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 PPDPFQ9H3Y8 114 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 PGPEP1Q9NXJ5 209 aa5.55□□□□□ -1.52
CCL28-204ENST00000514421 A0A087WTM6 91 aa5.54□□□□□ -1.52
CCL28-204ENST00000514421 IGHV3OR16-9A0A0B4J2B5 98 aa5.54□□□□□ -1.52
CCL28-204ENST00000514421 A0A0J9YXY3 114 aa5.54□□□□□ -1.52
CCL28-204ENST00000514421 NDUFA1O15239 70 aa5.54□□□□□ -1.52
CCL28-204ENST00000514421 ANGP03950 147 aaKnown RBP5.54□□□□□ -1.52
CCL28-204ENST00000514421 SMIM13P0DJ93 91 aa5.54□□□□□ -1.52
CCL28-204ENST00000514421 Q6ZVH6 145 aa5.54□□□□□ -1.52
CCL28-204ENST00000514421 LINC01561Q8N1V8 128 aa5.54□□□□□ -1.52
CCL28-204ENST00000514421 TMEM238LA0A1B0GVL6 79 aa5.53□□□□□ -1.52
CCL28-204ENST00000514421 A6NJY4 79 aa5.53□□□□□ -1.52
CCL28-204ENST00000514421 SPINK8P0C7L1 97 aa5.53□□□□□ -1.52
CCL28-204ENST00000514421 PTTG1IPP53801 180 aa5.53□□□□□ -1.52
CCL28-204ENST00000514421 UBE2V1Q13404 147 aa5.53□□□□□ -1.52
CCL28-204ENST00000514421 ENHOQ6UWT2 76 aa5.53□□□□□ -1.52
CCL28-204ENST00000514421 ZNF625Q96I27 306 aaPredicted RBP5.53□□□□□ -1.52
CCL28-204ENST00000514421 SPANXDQ9BXN6 97 aa5.53□□□□□ -1.52
CCL28-204ENST00000514421 SPANXCQ9NY87 97 aa5.53□□□□□ -1.52
CCL28-204ENST00000514421 NDUFA12Q9UI09 145 aa5.53□□□□□ -1.52
CCL28-204ENST00000514421 HECTD4Q9Y4D8 3996 aa5.53□□□□□ -1.52
CCL28-204ENST00000514421 LRP1BQ9NZR2 4599 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 IGKV2D-24A0A075B6R9 120 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 A0A087WZ39 114 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 TRAV13-1A0A0B4J241 112 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 LINC00959A0A1B0GUT2 108 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 LRCOL1A6NCL2 159 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 TMEM238C9JI98 176 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 CRPP02741 224 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 MIAQ16674 131 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 LINC00269Q8N2A0 174 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 PRR34Q9NV39 138 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 PKHD1P08F94 4074 aa5.52□□□□□ -1.53
CCL28-204ENST00000514421 IGHV3-64A0A075B6Q5 118 aa5.51□□□□□ -1.53
CCL28-204ENST00000514421 A0A1W2PPM0 123 aa5.51□□□□□ -1.53
CCL28-204ENST00000514421 C16orf90A8MZG2 172 aa5.51□□□□□ -1.53
CCL28-204ENST00000514421 KRTAP10-2P60368 255 aa5.51□□□□□ -1.53
CCL28-204ENST00000514421 HERV-K104P63124 156 aa5.51□□□□□ -1.53
CCL28-204ENST00000514421 SRSF9Q13242 221 aaKnown RBP eCLIP5.51□□□□□ -1.53
CCL28-204ENST00000514421 C1orf43Q9BWL3 253 aa5.51□□□□□ -1.53
CCL28-204ENST00000514421 NHP2Q9NX24 153 aaKnown RBP5.51□□□□□ -1.53
CCL28-204ENST00000514421 TRAV8-4A0A0B4J246 113 aa5.5□□□□□ -1.53
CCL28-204ENST00000514421 IFITM1P13164 125 aa5.5□□□□□ -1.53
CCL28-204ENST00000514421 REG3AQ06141 175 aa5.5□□□□□ -1.53
CCL28-204ENST00000514421 SFTA2Q6UW10 78 aa5.5□□□□□ -1.53
CCL28-204ENST00000514421 DNAH5Q8TE73 4624 aa5.5□□□□□ -1.53
CCL28-204ENST00000514421 A0A0B4J2C4 111 aa5.49□□□□□ -1.53
CCL28-204ENST00000514421 K7ERJ3 54 aa5.49□□□□□ -1.53
CCL28-204ENST00000514421 CFC1BP0CG36 223 aa5.49□□□□□ -1.53
CCL28-204ENST00000514421 CFC1P0CG37 223 aa5.49□□□□□ -1.53
CCL28-204ENST00000514421 RPL24P83731 157 aaKnown RBP5.49□□□□□ -1.53
CCL28-204ENST00000514421 SS18Q15532 418 aa5.49□□□□□ -1.53
CCL28-204ENST00000514421 ADAMTSL4-AS1Q5T5F5 129 aa5.49□□□□□ -1.53
CCL28-204ENST00000514421 H3BUT2 72 aa5.48□□□□□ -1.53
CCL28-204ENST00000514421 VAMP3Q15836 100 aa5.48□□□□□ -1.53
CCL28-204ENST00000514421 CLPSL2Q6UWE3 100 aa5.48□□□□□ -1.53
CCL28-204ENST00000514421 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
CCL28-204ENST00000514421 MUSTN1Q8IVN3 82 aa5.48□□□□□ -1.53
CCL28-204ENST00000514421 Q8N814 137 aa5.48□□□□□ -1.53
CCL28-204ENST00000514421 NTN5Q8WTR8 489 aaPredicted RBP5.48□□□□□ -1.53
CCL28-204ENST00000514421 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.47□□□□□ -1.53
CCL28-204ENST00000514421 A4D1N5 150 aa5.47□□□□□ -1.53
CCL28-204ENST00000514421 K7EP34 96 aa5.47□□□□□ -1.53
CCL28-204ENST00000514421 EIF4EBP3O60516 100 aaPredicted RBP5.47□□□□□ -1.53
CCL28-204ENST00000514421 FABP2P12104 132 aa5.47□□□□□ -1.53
CCL28-204ENST00000514421 CIRBPQ14011 172 aaKnown RBP5.47□□□□□ -1.53
CCL28-204ENST00000514421 WFDC2Q14508 124 aa5.47□□□□□ -1.53
CCL28-204ENST00000514421 KRTAP26-1Q6PEX3 210 aa5.47□□□□□ -1.53
CCL28-204ENST00000514421 CD164L2Q6UWJ8 174 aa5.47□□□□□ -1.53
CCL28-204ENST00000514421 GTF2H5Q6ZYL4 71 aa5.47□□□□□ -1.53
CCL28-204ENST00000514421 COX7B2Q8TF08 81 aa5.47□□□□□ -1.53
CCL28-204ENST00000514421 RAB37Q96AX2 223 aa5.47□□□□□ -1.53
CCL28-204ENST00000514421 KIAA1109Q2LD37 5005 aa5.46□□□□□ -1.54
CCL28-204ENST00000514421 IGLV10-54A0A075B6I4 117 aa5.46□□□□□ -1.54
CCL28-204ENST00000514421 IGLV5-52A0A0A0MRZ9 124 aa5.46□□□□□ -1.54
CCL28-204ENST00000514421 IGKV3OR2-268A0A0C4DH90 116 aa5.46□□□□□ -1.54
CCL28-204ENST00000514421 LECT2O14960 151 aa5.46□□□□□ -1.54
CCL28-204ENST00000514421 FUSP35637 526 aaKnown RBP eCLIP5.46□□□□□ -1.54
CCL28-204ENST00000514421 C14orf177Q52M58 125 aa5.46□□□□□ -1.54
CCL28-204ENST00000514421 Q8IZM0 81 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms