RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 IGKV2-28A0A075B6P5 120 aa5.52□□□□□ -1.53
CLCN3-209ENST00000513761 LYRM9A8MSI8 78 aa5.52□□□□□ -1.53
CLCN3-209ENST00000513761 A8MTW9 85 aa5.52□□□□□ -1.53
CLCN3-209ENST00000513761 IGKV2D-28P01615 120 aa5.52□□□□□ -1.53
CLCN3-209ENST00000513761 VPS13AQ96RL7 3174 aa5.52□□□□□ -1.53
CLCN3-209ENST00000513761 IGLV5-39A0A0G2JS06 123 aa5.51□□□□□ -1.53
CLCN3-209ENST00000513761 COL27A1Q8IZC6 1860 aaPredicted RBP5.51□□□□□ -1.53
CLCN3-209ENST00000513761 JMJD1CQ15652 2540 aa5.51□□□□□ -1.53
CLCN3-209ENST00000513761 MTORP42345 2549 aa5.51□□□□□ -1.53
CLCN3-209ENST00000513761 CYSRT1A8MQ03 144 aa5.51□□□□□ -1.53
CLCN3-209ENST00000513761 PRR4Q16378 134 aa5.51□□□□□ -1.53
CLCN3-209ENST00000513761 ZNF843Q8N446 348 aa5.5□□□□□ -1.53
CLCN3-209ENST00000513761 LINC01006Q8NI28 216 aa5.5□□□□□ -1.53
CLCN3-209ENST00000513761 TRAV7A0A075B6U4 112 aa5.5□□□□□ -1.53
CLCN3-209ENST00000513761 C11orf72Q8NBR9 251 aa5.5□□□□□ -1.53
CLCN3-209ENST00000513761 ZNF73O43830 326 aaPredicted RBP5.5□□□□□ -1.53
CLCN3-209ENST00000513761 COX17Q14061 63 aa5.5□□□□□ -1.53
CLCN3-209ENST00000513761 LITAFQ99732 161 aa5.5□□□□□ -1.53
CLCN3-209ENST00000513761 FHL2Q14192 279 aa5.49□□□□□ -1.53
CLCN3-209ENST00000513761 FAM19A3Q7Z5A8 133 aa5.49□□□□□ -1.53
CLCN3-209ENST00000513761 NDUFC1O43677 76 aa5.49□□□□□ -1.53
CLCN3-209ENST00000513761 NHLRC4P0CG21 123 aaPredicted RBP5.49□□□□□ -1.53
CLCN3-209ENST00000513761 MIFP14174 115 aa5.49□□□□□ -1.53
CLCN3-209ENST00000513761 CELA1Q9UNI1 258 aa5.49□□□□□ -1.53
CLCN3-209ENST00000513761 TRBV10-3A0A0K0K1G6 114 aa5.49□□□□□ -1.53
CLCN3-209ENST00000513761 IGKV2-24A0A0C4DH68 120 aa5.48□□□□□ -1.53
CLCN3-209ENST00000513761 EIF4EBP3O60516 100 aaPredicted RBP5.48□□□□□ -1.53
CLCN3-209ENST00000513761 Q8N3U1 123 aa5.48□□□□□ -1.53
CLCN3-209ENST00000513761 KIR2DL5BQ8NHK3 375 aa5.48□□□□□ -1.53
CLCN3-209ENST00000513761 HIGD2AQ9BW72 106 aa5.48□□□□□ -1.53
CLCN3-209ENST00000513761 WDFY4Q6ZS81 3184 aa5.48□□□□□ -1.53
CLCN3-209ENST00000513761 C6orf223Q8N319 242 aa5.48□□□□□ -1.53
CLCN3-209ENST00000513761 LAMA1P25391 3075 aa5.48□□□□□ -1.53
CLCN3-209ENST00000513761 A0A096LNI7 61 aa5.48□□□□□ -1.53
CLCN3-209ENST00000513761 LRCOL1A6NCL2 159 aa5.48□□□□□ -1.53
CLCN3-209ENST00000513761 FAM30AQ9NZY2 134 aa5.48□□□□□ -1.53
CLCN3-209ENST00000513761 MUC4Q99102 2169 aa5.47□□□□□ -1.53
CLCN3-209ENST00000513761 ZFYVE26Q68DK2 2539 aa5.47□□□□□ -1.53
CLCN3-209ENST00000513761 SMIM26A0A096LP01 95 aa5.47□□□□□ -1.53
CLCN3-209ENST00000513761 J3QKU1 62 aa5.47□□□□□ -1.53
CLCN3-209ENST00000513761 SMCR5Q8TEV8 140 aa5.47□□□□□ -1.53
CLCN3-209ENST00000513761 SERP1Q9Y6X1 66 aa5.47□□□□□ -1.53
CLCN3-209ENST00000513761 H0Y9J4 135 aa5.47□□□□□ -1.53
CLCN3-209ENST00000513761 WFDC10BQ8IUB3 73 aa5.47□□□□□ -1.53
CLCN3-209ENST00000513761 LRRK2Q5S007 2527 aa5.47□□□□□ -1.53
CLCN3-209ENST00000513761 IGLV5-45A0A087WSX0 123 aa5.47□□□□□ -1.53
CLCN3-209ENST00000513761 SPTSSBQ8NFR3 76 aa5.47□□□□□ -1.53
CLCN3-209ENST00000513761 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.46□□□□□ -1.53
CLCN3-209ENST00000513761 RPL37AP8A6NKH3 93 aa5.46□□□□□ -1.53
CLCN3-209ENST00000513761 M0R378 163 aa5.46□□□□□ -1.53
CLCN3-209ENST00000513761 CRYGAP11844 174 aa5.46□□□□□ -1.53
CLCN3-209ENST00000513761 KRTAP10-9P60411 292 aa5.46□□□□□ -1.53
CLCN3-209ENST00000513761 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.46□□□□□ -1.53
CLCN3-209ENST00000513761 FREM2Q5SZK8 3169 aa5.46□□□□□ -1.54
CLCN3-209ENST00000513761 NDUFB1O75438 58 aa5.46□□□□□ -1.54
CLCN3-209ENST00000513761 SYCNQ0VAF6 134 aa5.46□□□□□ -1.54
CLCN3-209ENST00000513761 LELP1Q5T871 98 aa5.46□□□□□ -1.54
CLCN3-209ENST00000513761 Q6ZVQ6 151 aa5.46□□□□□ -1.54
CLCN3-209ENST00000513761 ATP5EP56381 51 aaPredicted RBP5.46□□□□□ -1.54
CLCN3-209ENST00000513761 SZT2Q5T011 3432 aa5.46□□□□□ -1.54
CLCN3-209ENST00000513761 IGHV3OR16-9A0A0B4J2B5 98 aa5.45□□□□□ -1.54
CLCN3-209ENST00000513761 UBE2AP49459 152 aa5.45□□□□□ -1.54
CLCN3-209ENST00000513761 WFDC13Q8IUB5 93 aa5.45□□□□□ -1.54
CLCN3-209ENST00000513761 LINC01547P58512 204 aaPredicted RBP5.45□□□□□ -1.54
CLCN3-209ENST00000513761 LINC00575Q6W349 94 aa5.44□□□□□ -1.54
CLCN3-209ENST00000513761 C4orf26Q17RF5 130 aa5.44□□□□□ -1.54
CLCN3-209ENST00000513761 ZNF575Q86XF7 245 aa5.44□□□□□ -1.54
CLCN3-209ENST00000513761 SPEGQ15772 3267 aa5.44□□□□□ -1.54
CLCN3-209ENST00000513761 Q8N9L7 120 aa5.43□□□□□ -1.54
CLCN3-209ENST00000513761 IGLV1-51P01701 117 aa5.43□□□□□ -1.54
CLCN3-209ENST00000513761 C11orf45Q8TAV5 145 aa5.43□□□□□ -1.54
CLCN3-209ENST00000513761 KPRPQ5T749 579 aaPredicted RBP5.43□□□□□ -1.54
CLCN3-209ENST00000513761 V9GYY9 64 aa5.43□□□□□ -1.54
CLCN3-209ENST00000513761 DEFB131BA0A096LNP1 70 aa5.43□□□□□ -1.54
CLCN3-209ENST00000513761 A0A0J9YWU9 116 aa5.43□□□□□ -1.54
CLCN3-209ENST00000513761 NBEAQ8NFP9 2946 aa5.42□□□□□ -1.54
CLCN3-209ENST00000513761 DOPEY1Q5JWR5 2465 aa5.42□□□□□ -1.54
CLCN3-209ENST00000513761 ACANP16112 2415 aa5.42□□□□□ -1.54
CLCN3-209ENST00000513761 KLK9Q2XQG4 91 aa5.42□□□□□ -1.54
CLCN3-209ENST00000513761 C1orf195Q5TG92 126 aa5.42□□□□□ -1.54
CLCN3-209ENST00000513761 MUC7Q8TAX7 377 aa5.42□□□□□ -1.54
CLCN3-209ENST00000513761 ANKRD17O75179 2603 aaKnown RBP5.42□□□□□ -1.54
CLCN3-209ENST00000513761 A0A1B0GUV1 79 aa5.42□□□□□ -1.54
CLCN3-209ENST00000513761 MGAQ8IWI9 3026 aa5.41□□□□□ -1.54
CLCN3-209ENST00000513761 PRYO14603 147 aa5.41□□□□□ -1.54
CLCN3-209ENST00000513761 NANOS2P60321 138 aaKnown RBP5.41□□□□□ -1.54
CLCN3-209ENST00000513761 TMEM254Q8TBM7 123 aa5.41□□□□□ -1.54
CLCN3-209ENST00000513761 INAFM1C9JVW0 142 aa5.4□□□□□ -1.54
CLCN3-209ENST00000513761 DHRS4-AS1Q9P1J3 65 aa5.4□□□□□ -1.55
CLCN3-209ENST00000513761 ZNF462Q96JM2 2506 aa5.4□□□□□ -1.55
CLCN3-209ENST00000513761 TRBV7-6A0A0J9YX20 115 aa5.39□□□□□ -1.55
CLCN3-209ENST00000513761 CHKB-CPT1BH3BT56 60 aa5.39□□□□□ -1.55
CLCN3-209ENST00000513761 IGKV4-1P06312 121 aa5.39□□□□□ -1.55
CLCN3-209ENST00000513761 DSPP15924 2871 aaKnown RBP5.39□□□□□ -1.55
CLCN3-209ENST00000513761 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.39□□□□□ -1.55
CLCN3-209ENST00000513761 RPS28P62857 69 aaKnown RBP5.39□□□□□ -1.55
CLCN3-209ENST00000513761 EGFEM1PQ0D2K5 195 aa5.39□□□□□ -1.55
CLCN3-209ENST00000513761 C1orf137Q5JT78 98 aa5.38□□□□□ -1.55
CLCN3-209ENST00000513761 SPATA3Q8NHX4 192 aa5.38□□□□□ -1.55
CLCN3-209ENST00000513761 SMR3AQ99954 134 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms