RNA–Protein interactions for RNA: ENST00000513525.1

CCL28-203, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best) BASIC

Gene CCL28, Length 1,518 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-203ENST00000513525 Q8N1X5 172 aa6.64□□□□□ -1.35
CCL28-203ENST00000513525 C10orf126Q8N4M7 172 aa6.64□□□□□ -1.35
CCL28-203ENST00000513525 TMEM243Q9BU79 118 aa6.64□□□□□ -1.35
CCL28-203ENST00000513525 J3QQQ9 107 aa6.63□□□□□ -1.35
CCL28-203ENST00000513525 LGALS3P17931 250 aaKnown RBP6.63□□□□□ -1.35
CCL28-203ENST00000513525 UBE2D1P51668 147 aa6.63□□□□□ -1.35
CCL28-203ENST00000513525 FAM19A3Q7Z5A8 133 aa6.63□□□□□ -1.35
CCL28-203ENST00000513525 CEND1Q8N111 149 aa6.63□□□□□ -1.35
CCL28-203ENST00000513525 A0A087WTM6 91 aa6.62□□□□□ -1.35
CCL28-203ENST00000513525 GCSHP23434 173 aa6.62□□□□□ -1.35
CCL28-203ENST00000513525 SCGB1D4Q6XE38 83 aa6.62□□□□□ -1.35
CCL28-203ENST00000513525 HIST1H4GQ99525 98 aa6.62□□□□□ -1.35
CCL28-203ENST00000513525 IGLV5-45A0A087WSX0 123 aa6.61□□□□□ -1.35
CCL28-203ENST00000513525 UBE2L6O14933 153 aa6.61□□□□□ -1.35
CCL28-203ENST00000513525 LINC01556Q5JQF7 62 aa6.61□□□□□ -1.35
CCL28-203ENST00000513525 LINC00469Q8N7U9 141 aa6.61□□□□□ -1.35
CCL28-203ENST00000513525 OR5A1Q8NGJ0 315 aa6.61□□□□□ -1.35
CCL28-203ENST00000513525 TMEM101Q96IK0 257 aa6.61□□□□□ -1.35
CCL28-203ENST00000513525 GEMIN7Q9H840 131 aaKnown RBP6.61□□□□□ -1.35
CCL28-203ENST00000513525 TRBV6-8A0A0A6YYG3 113 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 SMIM13P0DJ93 91 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 PTTG1IPP53801 180 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 FXYD2P54710 66 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 TSPEAR-AS2P59090 65 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 HERVK_113P63121 156 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 AMMECR1LQ6DCA0 310 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 SPANXB1Q9NS25 103 aaPredicted RBP6.6□□□□□ -1.35
CCL28-203ENST00000513525 IGHV1-58A0A0C4DH39 117 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 C9orf118A6NHY6 69 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 IBA57-AS1B1ANH7 110 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 H3BS24 57 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 RNASE13Q5GAN3 156 aaKnown RBP6.6□□□□□ -1.35
CCL28-203ENST00000513525 LELP1Q5T871 98 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 CDC42SE2Q9NRR3 84 aa6.6□□□□□ -1.35
CCL28-203ENST00000513525 TMEM238LA0A1B0GVL6 79 aa6.59□□□□□ -1.35
CCL28-203ENST00000513525 A0A1B0GWB2 263 aa6.59□□□□□ -1.35
CCL28-203ENST00000513525 IGHV3-30-3P0DP02 117 aa6.59□□□□□ -1.35
CCL28-203ENST00000513525 UBE2V1Q13404 147 aa6.59□□□□□ -1.35
CCL28-203ENST00000513525 ATP6V0E2Q8NHE4 81 aa6.59□□□□□ -1.35
CCL28-203ENST00000513525 SRSF9Q13242 221 aaKnown RBP eCLIP6.58□□□□□ -1.36
CCL28-203ENST00000513525 Q6ZVH6 145 aa6.58□□□□□ -1.36
CCL28-203ENST00000513525 FUSP35637 526 aaKnown RBP eCLIP6.57□□□□□ -1.36
CCL28-203ENST00000513525 VAMP3Q15836 100 aa6.57□□□□□ -1.36
CCL28-203ENST00000513525 LINC00242Q5T6M2 205 aa6.57□□□□□ -1.36
CCL28-203ENST00000513525 IGLV5-39A0A0G2JS06 123 aa6.56□□□□□ -1.36
CCL28-203ENST00000513525 LRCOL1A6NCL2 159 aa6.56□□□□□ -1.36
CCL28-203ENST00000513525 TMEM238C9JI98 176 aa6.56□□□□□ -1.36
CCL28-203ENST00000513525 PSCAO43653 123 aa6.56□□□□□ -1.36
CCL28-203ENST00000513525 XGP55808 180 aa6.56□□□□□ -1.36
CCL28-203ENST00000513525 CHCHD5Q9BSY4 110 aa6.56□□□□□ -1.36
CCL28-203ENST00000513525 NHP2Q9NX24 153 aaKnown RBP6.56□□□□□ -1.36
CCL28-203ENST00000513525 CDKN2A-AS1Q9UH64 79 aa6.56□□□□□ -1.36
CCL28-203ENST00000513525 FAT1Q14517 4588 aa6.56□□□□□ -1.36
CCL28-203ENST00000513525 IGHV3-64A0A075B6Q5 118 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 SPINK8P0C7L1 97 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 KRTAP10-1P60331 282 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 GAGE6Q13070 117 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 NTN5Q8WTR8 489 aaPredicted RBP6.55□□□□□ -1.36
CCL28-203ENST00000513525 NDUFA12Q9UI09 145 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 DNAH8Q96JB1 4490 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 VPS13BQ7Z7G8 4022 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 TRAV8-3A0A0A6YYJ7 113 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 TRAV13-1A0A0B4J241 112 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 A0A0J9YXY3 114 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 A0A1B0GUV1 79 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 EPM2AB3EWF7 344 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 TIMM17BO60830 172 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 IGHV3-30P01768 117 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 IGHV3-33P01772 117 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 IGHV3-30-5P0DP03 117 aa6.55□□□□□ -1.36
CCL28-203ENST00000513525 A0A1W2PPM0 123 aa6.54□□□□□ -1.36
CCL28-203ENST00000513525 H3BUT2 72 aa6.54□□□□□ -1.36
CCL28-203ENST00000513525 NDUFA1O15239 70 aa6.54□□□□□ -1.36
CCL28-203ENST00000513525 CCL25O15444 150 aa6.54□□□□□ -1.36
CCL28-203ENST00000513525 COX6A2Q02221 97 aa6.54□□□□□ -1.36
CCL28-203ENST00000513525 GTF2H5Q6ZYL4 71 aa6.54□□□□□ -1.36
CCL28-203ENST00000513525 RAB37Q96AX2 223 aa6.54□□□□□ -1.36
CCL28-203ENST00000513525 Q9HAA7 133 aa6.54□□□□□ -1.36
CCL28-203ENST00000513525 SMIM1B2RUZ4 78 aa6.53□□□□□ -1.36
CCL28-203ENST00000513525 K7ERJ3 54 aa6.53□□□□□ -1.36
CCL28-203ENST00000513525 FABP2P12104 132 aa6.53□□□□□ -1.36
CCL28-203ENST00000513525 Q8N814 137 aa6.53□□□□□ -1.36
CCL28-203ENST00000513525 IGLV4-60A0A075B6I1 120 aa6.52□□□□□ -1.37
CCL28-203ENST00000513525 IGLV5-52A0A0A0MRZ9 124 aa6.52□□□□□ -1.37
CCL28-203ENST00000513525 GAGE10A6NGK3 116 aa6.52□□□□□ -1.37
CCL28-203ENST00000513525 K7EP34 96 aa6.52□□□□□ -1.37
CCL28-203ENST00000513525 RPL24P83731 157 aaKnown RBP6.52□□□□□ -1.37
CCL28-203ENST00000513525 SPANXDQ9BXN6 97 aa6.52□□□□□ -1.37
CCL28-203ENST00000513525 SPANXCQ9NY87 97 aa6.52□□□□□ -1.37
CCL28-203ENST00000513525 RBX1P62877 108 aa6.51□□□□□ -1.37
CCL28-203ENST00000513525 LITAFQ99732 161 aa6.51□□□□□ -1.37
CCL28-203ENST00000513525 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.5□□□□□ -1.37
CCL28-203ENST00000513525 IFITM1P13164 125 aa6.5□□□□□ -1.37
CCL28-203ENST00000513525 HERV-K104P63124 156 aa6.5□□□□□ -1.37
CCL28-203ENST00000513525 CIRBPQ14011 172 aaKnown RBP6.5□□□□□ -1.37
CCL28-203ENST00000513525 MIAQ16674 131 aa6.5□□□□□ -1.37
CCL28-203ENST00000513525 Q5VSD8 79 aa6.5□□□□□ -1.37
CCL28-203ENST00000513525 LINC00959A0A1B0GUT2 108 aa6.5□□□□□ -1.37
CCL28-203ENST00000513525 TMEM262E9PQX1 116 aa6.5□□□□□ -1.37
CCL28-203ENST00000513525 LINC01561Q8N1V8 128 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms