RNA–Protein interactions for RNA: ENST00000513349.5

DROSHA-220, Transcript of drosha ribonuclease III, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DROSHA, Length 4,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DROSHA-220ENST00000513349 HTTP42858 3142 aa6.38□□□□□ -1.39
DROSHA-220ENST00000513349 PCNTO95613 3336 aa6.38□□□□□ -1.39
DROSHA-220ENST00000513349 IGLV1-51P01701 117 aa6.38□□□□□ -1.39
DROSHA-220ENST00000513349 PRB2P02812 416 aaPredicted RBP6.37□□□□□ -1.39
DROSHA-220ENST00000513349 C9orf116Q5BN46 136 aaPredicted RBP6.37□□□□□ -1.39
DROSHA-220ENST00000513349 TRBV7-6A0A0J9YX20 115 aa6.37□□□□□ -1.39
DROSHA-220ENST00000513349 LINC01006Q8NI28 216 aa6.37□□□□□ -1.39
DROSHA-220ENST00000513349 Q9UF83 564 aa6.37□□□□□ -1.39
DROSHA-220ENST00000513349 HIVEP2P31629 2446 aa6.37□□□□□ -1.39
DROSHA-220ENST00000513349 IGKV2-28A0A075B6P5 120 aa6.37□□□□□ -1.39
DROSHA-220ENST00000513349 NDUFS5O43920 106 aa6.37□□□□□ -1.39
DROSHA-220ENST00000513349 IGKV2D-28P01615 120 aa6.37□□□□□ -1.39
DROSHA-220ENST00000513349 MRPL55Q7Z7F7 128 aaKnown RBP6.36□□□□□ -1.39
DROSHA-220ENST00000513349 LOC110117498A0A087WWA1 95 aa6.36□□□□□ -1.39
DROSHA-220ENST00000513349 A8MTW9 85 aa6.35□□□□□ -1.39
DROSHA-220ENST00000513349 EIF4EBP3O60516 100 aaPredicted RBP6.35□□□□□ -1.39
DROSHA-220ENST00000513349 MUC4Q99102 2169 aa6.35□□□□□ -1.39
DROSHA-220ENST00000513349 C4orf26Q17RF5 130 aa6.35□□□□□ -1.39
DROSHA-220ENST00000513349 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.35□□□□□ -1.39
DROSHA-220ENST00000513349 HIVEP3Q5T1R4 2406 aa6.35□□□□□ -1.39
DROSHA-220ENST00000513349 ESRGQ1W209 222 aa6.34□□□□□ -1.39
DROSHA-220ENST00000513349 C6orf223Q8N319 242 aa6.34□□□□□ -1.39
DROSHA-220ENST00000513349 Q6ZQT0 140 aa6.34□□□□□ -1.4
DROSHA-220ENST00000513349 F8WDY8 70 aa6.33□□□□□ -1.4
DROSHA-220ENST00000513349 FAM30AQ9NZY2 134 aa6.33□□□□□ -1.4
DROSHA-220ENST00000513349 UBE2AP49459 152 aa6.33□□□□□ -1.4
DROSHA-220ENST00000513349 H0Y9J4 135 aa6.32□□□□□ -1.4
DROSHA-220ENST00000513349 LINC00482Q8N8I6 264 aa6.32□□□□□ -1.4
DROSHA-220ENST00000513349 A0A0C4DFX4 3053 aa6.32□□□□□ -1.4
DROSHA-220ENST00000513349 SPATA3Q8NHX4 192 aa6.32□□□□□ -1.4
DROSHA-220ENST00000513349 SPTSSBQ8NFR3 76 aa6.32□□□□□ -1.4
DROSHA-220ENST00000513349 CELA1Q9UNI1 258 aa6.32□□□□□ -1.4
DROSHA-220ENST00000513349 USP9XQ93008 2570 aaPredicted RBP6.32□□□□□ -1.4
DROSHA-220ENST00000513349 LY6G6DO95868 133 aa6.32□□□□□ -1.4
DROSHA-220ENST00000513349 C1orf137Q5JT78 98 aa6.31□□□□□ -1.4
DROSHA-220ENST00000513349 HIGD2AQ9BW72 106 aa6.31□□□□□ -1.4
DROSHA-220ENST00000513349 A0A1B0GW54 56 aa6.31□□□□□ -1.4
DROSHA-220ENST00000513349 C2orf48Q96LS8 159 aa6.3□□□□□ -1.4
DROSHA-220ENST00000513349 B9D2Q9BPU9 175 aa6.3□□□□□ -1.4
DROSHA-220ENST00000513349 CHD7Q9P2D1 2997 aa6.3□□□□□ -1.4
DROSHA-220ENST00000513349 J3QKU1 62 aa6.3□□□□□ -1.4
DROSHA-220ENST00000513349 KPRPQ5T749 579 aaPredicted RBP6.3□□□□□ -1.4
DROSHA-220ENST00000513349 WFDC10BQ8IUB3 73 aa6.3□□□□□ -1.4
DROSHA-220ENST00000513349 CCDC168Q8NDH2 2452 aa6.3□□□□□ -1.4
DROSHA-220ENST00000513349 CHKB-CPT1BH3BT56 60 aa6.29□□□□□ -1.4
DROSHA-220ENST00000513349 WFDC13Q8IUB5 93 aa6.29□□□□□ -1.4
DROSHA-220ENST00000513349 C11orf45Q8TAV5 145 aa6.29□□□□□ -1.4
DROSHA-220ENST00000513349 USP9YO00507 2555 aaPredicted RBP6.29□□□□□ -1.4
DROSHA-220ENST00000513349 CEP295Q9C0D2 2601 aa6.29□□□□□ -1.4
DROSHA-220ENST00000513349 C14orf177Q52M58 125 aa6.29□□□□□ -1.4
DROSHA-220ENST00000513349 DEFB131BA0A096LNP1 70 aa6.28□□□□□ -1.4
DROSHA-220ENST00000513349 C16orf95Q9H693 158 aa6.28□□□□□ -1.4
DROSHA-220ENST00000513349 SONP18583 2426 aaKnown RBP6.28□□□□□ -1.4
DROSHA-220ENST00000513349 ERC2-IT1O76042 136 aa6.28□□□□□ -1.4
DROSHA-220ENST00000513349 PRR4Q16378 134 aa6.28□□□□□ -1.4
DROSHA-220ENST00000513349 ANKRD11Q6UB99 2663 aaPredicted RBP6.27□□□□□ -1.41
DROSHA-220ENST00000513349 KLKP1Q107X0 134 aa6.27□□□□□ -1.41
DROSHA-220ENST00000513349 NCOR2Q9Y618 2525 aa6.27□□□□□ -1.41
DROSHA-220ENST00000513349 PRRC2CQ9Y520 2896 aaKnown RBP6.27□□□□□ -1.41
DROSHA-220ENST00000513349 A6NED7 52 aa6.26□□□□□ -1.41
DROSHA-220ENST00000513349 TRAV10A0A0B4J240 114 aa6.26□□□□□ -1.41
DROSHA-220ENST00000513349 A0A0J9YWU9 116 aa6.26□□□□□ -1.41
DROSHA-220ENST00000513349 IGHV4-30-4P0DP06 118 aa6.26□□□□□ -1.41
DROSHA-220ENST00000513349 ELOF1P60002 83 aaKnown RBP6.25□□□□□ -1.41
DROSHA-220ENST00000513349 IGKV2-24A0A0C4DH68 120 aa6.25□□□□□ -1.41
DROSHA-220ENST00000513349 LINC00208Q96KT6 92 aa6.25□□□□□ -1.41
DROSHA-220ENST00000513349 FN1P02751 2386 aaKnown RBP6.25□□□□□ -1.41
DROSHA-220ENST00000513349 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
DROSHA-220ENST00000513349 IGKV4-1P06312 121 aa6.25□□□□□ -1.41
DROSHA-220ENST00000513349 PMAIP1Q13794 54 aa6.24□□□□□ -1.41
DROSHA-220ENST00000513349 hDV103S1A0JD37 113 aa6.24□□□□□ -1.41
DROSHA-220ENST00000513349 LRCOL1A6NCL2 159 aa6.24□□□□□ -1.41
DROSHA-220ENST00000513349 TM2D3Q9BRN9 247 aa6.24□□□□□ -1.41
DROSHA-220ENST00000513349 PLA2G2AP14555 144 aa6.23□□□□□ -1.41
DROSHA-220ENST00000513349 OBSCN-AS1Q96MR7 158 aa6.23□□□□□ -1.41
DROSHA-220ENST00000513349 NOTCH2Q04721 2471 aa6.23□□□□□ -1.41
DROSHA-220ENST00000513349 TLN2Q9Y4G6 2542 aa6.23□□□□□ -1.41
DROSHA-220ENST00000513349 HCG22E2RYF7 251 aa6.23□□□□□ -1.41
DROSHA-220ENST00000513349 Q8N9L7 120 aa6.23□□□□□ -1.41
DROSHA-220ENST00000513349 IL17DQ8TAD2 202 aa6.23□□□□□ -1.41
DROSHA-220ENST00000513349 LINC00167Q96N53 147 aa6.23□□□□□ -1.41
DROSHA-220ENST00000513349 CHD9Q3L8U1 2897 aa6.22□□□□□ -1.41
DROSHA-220ENST00000513349 GVQW2A0A096LPI5 108 aaPredicted RBP6.22□□□□□ -1.41
DROSHA-220ENST00000513349 WIPF1O43516 503 aa6.22□□□□□ -1.41
DROSHA-220ENST00000513349 IGLV6-57P01721 117 aa6.22□□□□□ -1.41
DROSHA-220ENST00000513349 C10orf25Q5T742 122 aa6.22□□□□□ -1.41
DROSHA-220ENST00000513349 LYPD5Q6UWN5 251 aa6.22□□□□□ -1.41
DROSHA-220ENST00000513349 Q6ZRU5 148 aa6.22□□□□□ -1.41
DROSHA-220ENST00000513349 C6orf48Q9UBA6 75 aa6.22□□□□□ -1.41
DROSHA-220ENST00000513349 MYO18BQ8IUG5 2567 aa6.21□□□□□ -1.41
DROSHA-220ENST00000513349 H7BZZ5 65 aa6.21□□□□□ -1.41
DROSHA-220ENST00000513349 SMIM29Q86T20 159 aa6.21□□□□□ -1.41
DROSHA-220ENST00000513349 BRCA2P51587 3418 aa6.21□□□□□ -1.42
DROSHA-220ENST00000513349 PLAC8L1A1L4L8 177 aa6.21□□□□□ -1.42
DROSHA-220ENST00000513349 PSPHP1O15172 72 aa6.21□□□□□ -1.42
DROSHA-220ENST00000513349 FSHBP01225 129 aa6.2□□□□□ -1.42
DROSHA-220ENST00000513349 LIMD2Q9BT23 127 aa6.2□□□□□ -1.42
DROSHA-220ENST00000513349 PRR15LQ9BU68 103 aa6.2□□□□□ -1.42
DROSHA-220ENST00000513349 REG3GQ6UW15 175 aa6.2□□□□□ -1.42
DROSHA-220ENST00000513349 PIEZO1Q92508 2521 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms