RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 ESRGQ1W209 222 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 CD164L2Q6UWJ8 174 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 KRTAP4-6Q9BYQ5 205 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 PPDPFQ9H3Y8 114 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 SPANXB1Q9NS25 103 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 PGPEP1Q9NXJ5 209 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 LINC00588Q9Y4M8 146 aa7.02□□□□□ -1.29
PDLIM5-217ENST00000512274 ZNF815PA8K554 130 aa7.01□□□□□ -1.29
PDLIM5-217ENST00000512274 TIMM17BO60830 172 aa7.01□□□□□ -1.29
PDLIM5-217ENST00000512274 CCL18P55774 89 aa7.01□□□□□ -1.29
PDLIM5-217ENST00000512274 TSPEAR-AS2P59090 65 aa7.01□□□□□ -1.29
PDLIM5-217ENST00000512274 COX6A2Q02221 97 aa7.01□□□□□ -1.29
PDLIM5-217ENST00000512274 REG3AQ06141 175 aa7.01□□□□□ -1.29
PDLIM5-217ENST00000512274 SNHG12Q9BXW3 62 aa7.01□□□□□ -1.29
PDLIM5-217ENST00000512274 Q9H8V8 135 aa7.01□□□□□ -1.29
PDLIM5-217ENST00000512274 TP73-AS1Q9UF72 201 aa7.01□□□□□ -1.29
PDLIM5-217ENST00000512274 NDUFA1O15239 70 aa7□□□□□ -1.29
PDLIM5-217ENST00000512274 MIAQ16674 131 aa7□□□□□ -1.29
PDLIM5-217ENST00000512274 Q6ZVH6 145 aa7□□□□□ -1.29
PDLIM5-217ENST00000512274 TM2D2Q9BX73 214 aa7□□□□□ -1.29
PDLIM5-217ENST00000512274 A0A0J9YXY3 114 aa6.99□□□□□ -1.29
PDLIM5-217ENST00000512274 ANGP03950 147 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-217ENST00000512274 HERV-K104P63124 156 aa6.99□□□□□ -1.29
PDLIM5-217ENST00000512274 LINC00269Q8N2A0 174 aa6.99□□□□□ -1.29
PDLIM5-217ENST00000512274 TRAV8-3A0A0A6YYJ7 113 aa6.98□□□□□ -1.29
PDLIM5-217ENST00000512274 PTTG1IPP53801 180 aa6.98□□□□□ -1.29
PDLIM5-217ENST00000512274 BVES-AS1Q5T3Y7 98 aa6.98□□□□□ -1.29
PDLIM5-217ENST00000512274 C10orf126Q8N4M7 172 aa6.98□□□□□ -1.29
PDLIM5-217ENST00000512274 ZNF625Q96I27 306 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-217ENST00000512274 TTTY13Q9BZ97 58 aa6.98□□□□□ -1.29
PDLIM5-217ENST00000512274 NDUFA12Q9UI09 145 aa6.98□□□□□ -1.29
PDLIM5-217ENST00000512274 SPINK8P0C7L1 97 aa6.97□□□□□ -1.29
PDLIM5-217ENST00000512274 CXCL5P42830 114 aa6.97□□□□□ -1.29
PDLIM5-217ENST00000512274 FAT1Q14517 4588 aa6.97□□□□□ -1.29
PDLIM5-217ENST00000512274 TTC32Q5I0X7 151 aa6.97□□□□□ -1.29
PDLIM5-217ENST00000512274 ENHOQ6UWT2 76 aa6.97□□□□□ -1.29
PDLIM5-217ENST00000512274 WFDC10BQ8IUB3 73 aa6.97□□□□□ -1.29
PDLIM5-217ENST00000512274 Q8IZM0 81 aa6.97□□□□□ -1.29
PDLIM5-217ENST00000512274 CHCHD10Q8WYQ3 142 aaPredicted RBP6.97□□□□□ -1.29
PDLIM5-217ENST00000512274 SRRM2Q9UQ35 2752 aaKnown RBP6.97□□□□□ -1.29
PDLIM5-217ENST00000512274 TMEM238C9JI98 176 aa6.96□□□□□ -1.3
PDLIM5-217ENST00000512274 EREGO14944 169 aa6.96□□□□□ -1.3
PDLIM5-217ENST00000512274 FOXI1Q12951 378 aa6.96□□□□□ -1.3
PDLIM5-217ENST00000512274 COL5A1-AS1Q5SY13 56 aa6.96□□□□□ -1.3
PDLIM5-217ENST00000512274 SCGB1D4Q6XE38 83 aa6.96□□□□□ -1.3
PDLIM5-217ENST00000512274 ORAOV1Q8WV07 137 aa6.96□□□□□ -1.3
PDLIM5-217ENST00000512274 A0A1B0GWB2 263 aa6.95□□□□□ -1.3
PDLIM5-217ENST00000512274 IBA57-AS1B1ANH7 110 aa6.95□□□□□ -1.3
PDLIM5-217ENST00000512274 COX7A2LO14548 114 aa6.95□□□□□ -1.3
PDLIM5-217ENST00000512274 CRPP02741 224 aa6.95□□□□□ -1.3
PDLIM5-217ENST00000512274 KRTAP26-1Q6PEX3 210 aa6.95□□□□□ -1.3
PDLIM5-217ENST00000512274 CEND1Q8N111 149 aa6.95□□□□□ -1.3
PDLIM5-217ENST00000512274 COX7B2Q8TF08 81 aa6.95□□□□□ -1.3
PDLIM5-217ENST00000512274 LITAFQ99732 161 aa6.95□□□□□ -1.3
PDLIM5-217ENST00000512274 SPANXDQ9BXN6 97 aa6.95□□□□□ -1.3
PDLIM5-217ENST00000512274 SPANXCQ9NY87 97 aa6.95□□□□□ -1.3
PDLIM5-217ENST00000512274 KLK12Q9UKR0 248 aa6.95□□□□□ -1.3
PDLIM5-217ENST00000512274 IGHV3-64A0A075B6Q5 118 aa6.94□□□□□ -1.3
PDLIM5-217ENST00000512274 F8WDY8 70 aa6.94□□□□□ -1.3
PDLIM5-217ENST00000512274 APOMO95445 188 aa6.94□□□□□ -1.3
PDLIM5-217ENST00000512274 IFITM1P13164 125 aa6.94□□□□□ -1.3
PDLIM5-217ENST00000512274 GCSHP23434 173 aa6.94□□□□□ -1.3
PDLIM5-217ENST00000512274 XCL1P47992 114 aa6.94□□□□□ -1.3
PDLIM5-217ENST00000512274 Q8N3U1 123 aa6.94□□□□□ -1.3
PDLIM5-217ENST00000512274 VPS13BQ7Z7G8 4022 aa6.93□□□□□ -1.3
PDLIM5-217ENST00000512274 A6NDN8 102 aa6.93□□□□□ -1.3
PDLIM5-217ENST00000512274 IGHV3-30P01768 117 aa6.93□□□□□ -1.3
PDLIM5-217ENST00000512274 IGHV3-30-5P0DP03 117 aa6.93□□□□□ -1.3
PDLIM5-217ENST00000512274 HINT1P49773 126 aaPredicted RBP6.93□□□□□ -1.3
PDLIM5-217ENST00000512274 KIAA0087Q14695 138 aa6.93□□□□□ -1.3
PDLIM5-217ENST00000512274 Q6ZRN7 208 aaPredicted RBP6.93□□□□□ -1.3
PDLIM5-217ENST00000512274 COPS9Q8WXC6 57 aa6.93□□□□□ -1.3
PDLIM5-217ENST00000512274 IGKV3OR2-268A0A0C4DH90 116 aa6.92□□□□□ -1.3
PDLIM5-217ENST00000512274 TMEM238LA0A1B0GVL6 79 aa6.92□□□□□ -1.3
PDLIM5-217ENST00000512274 A6NJY4 79 aa6.92□□□□□ -1.3
PDLIM5-217ENST00000512274 CIRBPQ14011 172 aaKnown RBP6.92□□□□□ -1.3
PDLIM5-217ENST00000512274 LCE2AQ5TA79 106 aaPredicted RBP6.92□□□□□ -1.3
PDLIM5-217ENST00000512274 HIST1H4GQ99525 98 aa6.92□□□□□ -1.3
PDLIM5-217ENST00000512274 IGHV3-33P01772 117 aa6.91□□□□□ -1.3
PDLIM5-217ENST00000512274 PLA2G1BP04054 148 aaKnown RBP6.91□□□□□ -1.3
PDLIM5-217ENST00000512274 C5orf38Q86SI9 138 aa6.91□□□□□ -1.3
PDLIM5-217ENST00000512274 UBE2WQ96B02 151 aa6.91□□□□□ -1.3
PDLIM5-217ENST00000512274 RMI2Q96E14 147 aa6.91□□□□□ -1.3
PDLIM5-217ENST00000512274 COX11Q9Y6N1 276 aa6.91□□□□□ -1.3
PDLIM5-217ENST00000512274 HMCN2Q8NDA2 5059 aa6.9□□□□□ -1.3
PDLIM5-217ENST00000512274 GVQW2A0A096LPI5 108 aaPredicted RBP6.9□□□□□ -1.3
PDLIM5-217ENST00000512274 GAGE12HA6NDE8 117 aa6.9□□□□□ -1.3
PDLIM5-217ENST00000512274 FXYD2P54710 66 aa6.9□□□□□ -1.3
PDLIM5-217ENST00000512274 SRSF9Q13242 221 aaKnown RBP eCLIP6.9□□□□□ -1.3
PDLIM5-217ENST00000512274 COX17Q14061 63 aa6.9□□□□□ -1.3
PDLIM5-217ENST00000512274 CLPSL2Q6UWE3 100 aa6.9□□□□□ -1.3
PDLIM5-217ENST00000512274 LOC107984156A0A0G2JMH3 177 aa6.89□□□□□ -1.31
PDLIM5-217ENST00000512274 PRSS2P07478 247 aa6.89□□□□□ -1.31
PDLIM5-217ENST00000512274 RPL24P83731 157 aaKnown RBP6.89□□□□□ -1.31
PDLIM5-217ENST00000512274 ARL17AQ8IVW1 177 aa6.89□□□□□ -1.31
PDLIM5-217ENST00000512274 C1orf43Q9BWL3 253 aa6.89□□□□□ -1.31
PDLIM5-217ENST00000512274 IGLV10-54A0A075B6I4 117 aa6.88□□□□□ -1.31
PDLIM5-217ENST00000512274 A0A087WTM6 91 aa6.88□□□□□ -1.31
PDLIM5-217ENST00000512274 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.88□□□□□ -1.31
PDLIM5-217ENST00000512274 MALP21145 153 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms