RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 TULP4Q9NRJ4 1543 aa0.03□□□□□ -2.4
CHD1-207ENST00000511628 A0A1B0GU69 56 aa0.03□□□□□ -2.4
CHD1-207ENST00000511628 K7EQZ3 153 aa0.03□□□□□ -2.4
CHD1-207ENST00000511628 PMCHL2Q9BQD1 86 aa0.03□□□□□ -2.4
CHD1-207ENST00000511628 CRIPTQ9P021 101 aa0.03□□□□□ -2.4
CHD1-207ENST00000511628 A0A0G2JMZ2 1700 aa0.03□□□□□ -2.4
CHD1-207ENST00000511628 ABCC5O15440 1437 aa0.03□□□□□ -2.41
CHD1-207ENST00000511628 WNK1Q9H4A3 2382 aa0.03□□□□□ -2.41
CHD1-207ENST00000511628 ABCC2Q92887 1545 aa0.03□□□□□ -2.41
CHD1-207ENST00000511628 CHD8Q9HCK8 2581 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 ARHGEF5Q12774 1597 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 TENM4Q6N022 2769 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 VWFP04275 2813 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 A0A0G2JND7 137 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 H7BZZ5 65 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 M0R143 59 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 ARMS2P0C7Q2 107 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 GNGT1P63211 74 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 NSD1Q96L73 2696 aaPredicted RBP0.02□□□□□ -2.41
CHD1-207ENST00000511628 PIEZO2Q9H5I5 2752 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 TEX14Q8IWB6 1497 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 MLH3Q9UHC1 1453 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 PRDM15P57071 1507 aaPredicted RBP0.02□□□□□ -2.41
CHD1-207ENST00000511628 APC2O95996 2303 aa0.02□□□□□ -2.41
CHD1-207ENST00000511628 MAP1BP46821 2468 aaKnown RBP0.02□□□□□ -2.41
CHD1-207ENST00000511628 H0Y9P7 68 aa0.01□□□□□ -2.41
CHD1-207ENST00000511628 S100A8P05109 93 aa0.01□□□□□ -2.41
CHD1-207ENST00000511628 ASIPP42127 132 aa0.01□□□□□ -2.41
CHD1-207ENST00000511628 COL5A1-AS1Q5SY13 56 aa0.01□□□□□ -2.41
CHD1-207ENST00000511628 ZNF720Q7Z2F6 126 aa0.01□□□□□ -2.41
CHD1-207ENST00000511628 CNTLNQ9NXG0 1405 aa0.01□□□□□ -2.41
CHD1-207ENST00000511628 FYCO1Q9BQS8 1478 aa0.01□□□□□ -2.41
CHD1-207ENST00000511628 PEG3Q9GZU2 1588 aa0.01□□□□□ -2.41
CHD1-207ENST00000511628 CHD6Q8TD26 2715 aa0□□□□□ -2.41
CHD1-207ENST00000511628 PKD1L1Q8TDX9 2849 aa0□□□□□ -2.41
CHD1-207ENST00000511628 A0A087WVE0 104 aa0□□□□□ -2.41
CHD1-207ENST00000511628 UQCRHLA0A096LP55 91 aa0□□□□□ -2.41
CHD1-207ENST00000511628 LOC730098B7Z3J9 87 aa0□□□□□ -2.41
CHD1-207ENST00000511628 I3L3M4 83 aa0□□□□□ -2.41
CHD1-207ENST00000511628 CACNA1AO00555 2505 aa0□□□□□ -2.41
CHD1-207ENST00000511628 ANKRD17O75179 2603 aaKnown RBP0□□□□□ -2.41
CHD1-207ENST00000511628 MT-ATP8P03928 68 aa0□□□□□ -2.41
CHD1-207ENST00000511628 SPRR2DP22532 72 aa0□□□□□ -2.41
CHD1-207ENST00000511628 SMIM11AP58511 58 aa0□□□□□ -2.41
CHD1-207ENST00000511628 TOP2BQ02880 1626 aa0□□□□□ -2.41
CHD1-207ENST00000511628 CSMD3Q7Z407 3707 aa0□□□□□ -2.41
CHD1-207ENST00000511628 C6orf201Q7Z4U5 140 aa0□□□□□ -2.41
CHD1-207ENST00000511628 PLEKHH2Q8IVE3 1493 aa0□□□□□ -2.41
CHD1-207ENST00000511628 DEFB105AQ8NG35 78 aa0□□□□□ -2.41
CHD1-207ENST00000511628 FXYD6Q9H0Q3 95 aa0□□□□□ -2.41
CHD1-207ENST00000511628 RAPGEF2Q9Y4G8 1499 aa0□□□□□ -2.41
CHD1-207ENST00000511628 TSC2P49815 1807 aa-0.01□□□□□ -2.41
CHD1-207ENST00000511628 XRN1Q8IZH2 1706 aaKnown RBP-0.01□□□□□ -2.41
CHD1-207ENST00000511628 ABCA3Q99758 1704 aa-0.01□□□□□ -2.41
CHD1-207ENST00000511628 TOPAZ1Q8N9V7 1692 aa-0.01□□□□□ -2.41
CHD1-207ENST00000511628 ANKRD36BQ8N2N9 1353 aa-0.01□□□□□ -2.41
CHD1-207ENST00000511628 CPSF4LA6NMK7 179 aaKnown RBP-0.01□□□□□ -2.41
CHD1-207ENST00000511628 FAUP35544 74 aaKnown RBP-0.01□□□□□ -2.41
CHD1-207ENST00000511628 LCN9Q8WX39 176 aa-0.01□□□□□ -2.41
CHD1-207ENST00000511628 EP300Q09472 2414 aaPredicted RBP-0.01□□□□□ -2.41
CHD1-207ENST00000511628 FLNCQ14315 2725 aa-0.01□□□□□ -2.41
CHD1-207ENST00000511628 FLNAP21333 2647 aaKnown RBP-0.01□□□□□ -2.41
CHD1-207ENST00000511628 NUP188Q5SRE5 1749 aa-0.01□□□□□ -2.41
CHD1-207ENST00000511628 EDC4Q6P2E9 1401 aaKnown RBP-0.02□□□□□ -2.41
CHD1-207ENST00000511628 VPS8Q8N3P4 1428 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 TRBV7-7A0A0K0K1E9 115 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 D6R8Y8 96 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 LEPROTL1O95214 131 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 GYPAP02724 150 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 PKIAP61925 76 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 ETDBQ3ZM63 59 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 NCMAPQ5T1S8 102 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 MUSTN1Q8IVN3 82 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 DEFB107AQ8IZN7 70 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 CHD1O14646 1710 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 COL4A6Q14031 1691 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 CC2D2AQ9P2K1 1620 aa-0.02□□□□□ -2.41
CHD1-207ENST00000511628 IQSEC2Q5JU85 1478 aa-0.03□□□□□ -2.41
CHD1-207ENST00000511628 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.03□□□□□ -2.41
CHD1-207ENST00000511628 CCL22O00626 93 aa-0.03□□□□□ -2.41
CHD1-207ENST00000511628 PSENENQ9NZ42 101 aa-0.03□□□□□ -2.41
CHD1-207ENST00000511628 APLNQ9ULZ1 77 aa-0.03□□□□□ -2.41
CHD1-207ENST00000511628 KIAA0556O60303 1618 aa-0.03□□□□□ -2.41
CHD1-207ENST00000511628 MYCBP2O75592 4640 aa-0.03□□□□□ -2.41
CHD1-207ENST00000511628 EPRSP07814 1512 aaKnown RBP-0.03□□□□□ -2.41
CHD1-207ENST00000511628 NLRP1Q9C000 1473 aa-0.03□□□□□ -2.41
CHD1-207ENST00000511628 ATRQ13535 2644 aa-0.04□□□□□ -2.42
CHD1-207ENST00000511628 SPTY2D1-AS1A0A0U1RR47 76 aa-0.04□□□□□ -2.42
CHD1-207ENST00000511628 PRM1P04553 51 aa-0.04□□□□□ -2.42
CHD1-207ENST00000511628 HMCN2Q8NDA2 5059 aa-0.04□□□□□ -2.42
CHD1-207ENST00000511628 DCHS2Q6V1P9 2916 aa-0.04□□□□□ -2.42
CHD1-207ENST00000511628 LRRC37AA6NMS7 1700 aa-0.04□□□□□ -2.42
CHD1-207ENST00000511628 CLIP1P30622 1438 aa-0.04□□□□□ -2.42
CHD1-207ENST00000511628 SCN7AQ01118 1682 aa-0.05□□□□□ -2.42
CHD1-207ENST00000511628 ANKRD36A6QL64 1941 aa-0.05□□□□□ -2.42
CHD1-207ENST00000511628 ACANP16112 2415 aa-0.05□□□□□ -2.42
CHD1-207ENST00000511628 F8WEM9 126 aa-0.05□□□□□ -2.42
CHD1-207ENST00000511628 M0R2T5 61 aa-0.05□□□□□ -2.42
CHD1-207ENST00000511628 CUX1P39880 1505 aa-0.06□□□□□ -2.42
CHD1-207ENST00000511628 CNOT1A5YKK6 2376 aaKnown RBP-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms