RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 LAMC1P11047 1609 aa0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 PLCE1Q9P212 2302 aa0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 GYPAP02724 150 aa0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 UBR5O95071 2799 aaPredicted RBP0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 TEX14Q8IWB6 1497 aa0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 AKAP6Q13023 2319 aa0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 C2CD3Q4AC94 2353 aa0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 PAPPAQ13219 1627 aa0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 COL7A1Q02388 2944 aa0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 TRBV7-7A0A0K0K1E9 115 aa0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 SPTY2D1-AS1A0A0U1RR47 76 aa0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 F8WEM9 126 aa0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 PRM1P04553 51 aa0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 PYY3Q5JQD4 70 aa0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 SNHG12Q9BXW3 62 aa0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 PLEKHH2Q8IVE3 1493 aa0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 ZFYVE16Q7Z3T8 1539 aa0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 TULP4Q9NRJ4 1543 aa0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 CUL7Q14999 1698 aa0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 PPRC1Q5VV67 1664 aaKnown RBP0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 HRNRQ86YZ3 2850 aaPredicted RBP0□□□□□ -2.41
TRAPPC11-207ENST00000511409 IGLC2P0DOY2 106 aa0□□□□□ -2.41
TRAPPC11-207ENST00000511409 IGLC3P0DOY3 106 aa0□□□□□ -2.41
TRAPPC11-207ENST00000511409 PRDM15P57071 1507 aaPredicted RBP0□□□□□ -2.41
TRAPPC11-207ENST00000511409 PEA15Q15121 130 aa0□□□□□ -2.41
TRAPPC11-207ENST00000511409 HEPN1Q6WQI6 88 aa0□□□□□ -2.41
TRAPPC11-207ENST00000511409 MRC2Q9UBG0 1479 aa0□□□□□ -2.41
TRAPPC11-207ENST00000511409 RAPGEF2Q9Y4G8 1499 aa0□□□□□ -2.41
TRAPPC11-207ENST00000511409 UNC79Q9P2D8 2635 aa-0□□□□□ -2.41
TRAPPC11-207ENST00000511409 TCHHQ07283 1943 aa-0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 BTAF1O14981 1849 aa-0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 SPHKAPQ2M3C7 1700 aa-0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 NLRP1Q9C000 1473 aa-0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 FLNAP21333 2647 aaKnown RBP-0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 CCL22O00626 93 aa-0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 SPRR2DP22532 72 aa-0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 DEFB112Q30KQ8 113 aa-0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 HIGD1BQ9P298 99 aa-0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 CDKN2A-AS1Q9UH64 79 aa-0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 DOPEY2Q9Y3R5 2298 aa-0.01□□□□□ -2.41
TRAPPC11-207ENST00000511409 DIP2CQ9Y2E4 1556 aa-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 ABCC2Q92887 1545 aa-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 WNK2Q9Y3S1 2297 aa-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 M0R2T5 61 aa-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 CYB5AP00167 134 aa-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 PLGLAQ15195 96 aa-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 H1FX-AS1Q4G0G2 97 aa-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 NMSQ5H8A3 153 aa-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 MRPL34Q9BQ48 92 aaKnown RBP-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 V9GYS6 101 aa-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 ARHGEF5Q12774 1597 aa-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 SSPOA2VEC9 5147 aa-0.02□□□□□ -2.41
TRAPPC11-207ENST00000511409 FYCO1Q9BQS8 1478 aa-0.03□□□□□ -2.41
TRAPPC11-207ENST00000511409 HIVEP3Q5T1R4 2406 aa-0.03□□□□□ -2.41
TRAPPC11-207ENST00000511409 ABCA2Q9BZC7 2435 aa-0.03□□□□□ -2.41
TRAPPC11-207ENST00000511409 CLIP1P30622 1438 aa-0.03□□□□□ -2.41
TRAPPC11-207ENST00000511409 FLNCQ14315 2725 aa-0.03□□□□□ -2.41
TRAPPC11-207ENST00000511409 HMGN2P05204 90 aaKnown RBP-0.03□□□□□ -2.41
TRAPPC11-207ENST00000511409 RPL38P63173 70 aaKnown RBP-0.03□□□□□ -2.41
TRAPPC11-207ENST00000511409 C20orf78Q9BR46 151 aa-0.03□□□□□ -2.41
TRAPPC11-207ENST00000511409 GPR98Q8WXG9 6306 aa-0.03□□□□□ -2.41
TRAPPC11-207ENST00000511409 NRXN1Q9ULB1 1477 aa-0.03□□□□□ -2.41
TRAPPC11-207ENST00000511409 TOP2BQ02880 1626 aa-0.04□□□□□ -2.42
TRAPPC11-207ENST00000511409 LRP1Q07954 4544 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC11-207ENST00000511409 A0A1B0GUT8 65 aa-0.04□□□□□ -2.42
TRAPPC11-207ENST00000511409 S100A16Q96FQ6 103 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC11-207ENST00000511409 PDCD11Q14690 1871 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC11-207ENST00000511409 TENM4Q6N022 2769 aa-0.04□□□□□ -2.42
TRAPPC11-207ENST00000511409 ABCC10Q5T3U5 1492 aa-0.04□□□□□ -2.42
TRAPPC11-207ENST00000511409 A0A0G2JMZ2 1700 aa-0.04□□□□□ -2.42
TRAPPC11-207ENST00000511409 CHD9Q3L8U1 2897 aa-0.04□□□□□ -2.42
TRAPPC11-207ENST00000511409 EDC4Q6P2E9 1401 aaKnown RBP-0.04□□□□□ -2.42
TRAPPC11-207ENST00000511409 VPS8Q8N3P4 1428 aa-0.04□□□□□ -2.42
TRAPPC11-207ENST00000511409 COL4A6Q14031 1691 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 DOPEY1Q5JWR5 2465 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 PVALEFA0A1B0GWK0 134 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 IQCF6A8MYZ5 107 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 COX7BP24311 80 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 SNRPFP62306 86 aaKnown RBP-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 C9orf62Q8N4C0 152 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 GAFA1Q96PS6 74 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 RABAC1Q9UI14 185 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 UBE2D4Q9Y2X8 147 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 ZNF292O60281 2723 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 IQSEC2Q5JU85 1478 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 NCOR1O75376 2440 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 SPTBN1Q01082 2364 aaKnown RBP-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 APC2O95996 2303 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 SHROOM2Q13796 1616 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 CC2D2AQ9P2K1 1620 aa-0.05□□□□□ -2.42
TRAPPC11-207ENST00000511409 CCNB3Q8WWL7 1395 aa-0.06□□□□□ -2.42
TRAPPC11-207ENST00000511409 PLIN4Q96Q06 1357 aa-0.06□□□□□ -2.42
TRAPPC11-207ENST00000511409 CELSR1Q9NYQ6 3014 aa-0.06□□□□□ -2.42
TRAPPC11-207ENST00000511409 STAB2Q8WWQ8 2551 aa-0.06□□□□□ -2.42
TRAPPC11-207ENST00000511409 STAB1Q9NY15 2570 aa-0.06□□□□□ -2.42
TRAPPC11-207ENST00000511409 MYMXA0A1B0GTQ4 84 aa-0.06□□□□□ -2.42
TRAPPC11-207ENST00000511409 ACYP1P07311 99 aa-0.06□□□□□ -2.42
TRAPPC11-207ENST00000511409 DEFB135Q30KP9 77 aa-0.06□□□□□ -2.42
TRAPPC11-207ENST00000511409 WFDC13Q8IUB5 93 aa-0.06□□□□□ -2.42
TRAPPC11-207ENST00000511409 NKTRP30414 1462 aaKnown RBP-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms