RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 ERASQ7Z444 233 aa8.8□□□□□ -1
HMGCS1-203ENST00000507004 TOMM7Q9P0U1 55 aa8.8□□□□□ -1
HMGCS1-203ENST00000507004 IGLV1-50A0A075B6I6 118 aa8.79□□□□□ -1
HMGCS1-203ENST00000507004 LBHQ53QV2 105 aaPredicted RBP8.79□□□□□ -1
HMGCS1-203ENST00000507004 TMEM218A2RU14 115 aa8.78□□□□□ -1
HMGCS1-203ENST00000507004 F8VRH5 84 aa8.78□□□□□ -1
HMGCS1-203ENST00000507004 SCGB3A1Q96QR1 104 aa8.78□□□□□ -1
HMGCS1-203ENST00000507004 GNB1LQ9BYB4 327 aa8.78□□□□□ -1
HMGCS1-203ENST00000507004 NUPR1O60356 82 aa8.77□□□□□ -1.01
HMGCS1-203ENST00000507004 C9orf129Q5T035 196 aaKnown RBP8.77□□□□□ -1.01
HMGCS1-203ENST00000507004 SEC11CQ9BY50 192 aa8.77□□□□□ -1.01
HMGCS1-203ENST00000507004 CDKN2A-AS1Q9UH64 79 aa8.77□□□□□ -1.01
HMGCS1-203ENST00000507004 RPL13AP40429 203 aaKnown RBP8.76□□□□□ -1.01
HMGCS1-203ENST00000507004 PDZD11Q5EBL8 140 aa8.76□□□□□ -1.01
HMGCS1-203ENST00000507004 ZC2HC1BQ5TFG8 222 aa8.76□□□□□ -1.01
HMGCS1-203ENST00000507004 TP73-AS1Q9UF72 201 aa8.76□□□□□ -1.01
HMGCS1-203ENST00000507004 TINCRA0A1B0GVN0 87 aa8.75□□□□□ -1.01
HMGCS1-203ENST00000507004 LINC01546A6NGU7 62 aa8.75□□□□□ -1.01
HMGCS1-203ENST00000507004 LINC00469Q8N7U9 141 aa8.75□□□□□ -1.01
HMGCS1-203ENST00000507004 ADCYAP1P18509 176 aa8.74□□□□□ -1.01
HMGCS1-203ENST00000507004 KIAA1644Q3SXP7 199 aa8.74□□□□□ -1.01
HMGCS1-203ENST00000507004 KRTAP7-1Q8IUC3 87 aa8.74□□□□□ -1.01
HMGCS1-203ENST00000507004 MRPL18Q9H0U6 180 aaKnown RBP8.74□□□□□ -1.01
HMGCS1-203ENST00000507004 CARHSP1Q9Y2V2 147 aaKnown RBP8.74□□□□□ -1.01
HMGCS1-203ENST00000507004 IGLV5-45A0A087WSX0 123 aa8.73□□□□□ -1.01
HMGCS1-203ENST00000507004 ZNF861PO60384 105 aa8.73□□□□□ -1.01
HMGCS1-203ENST00000507004 KRTAP11-1Q8IUC1 163 aa8.73□□□□□ -1.01
HMGCS1-203ENST00000507004 SMCO4Q9NRQ5 59 aa8.73□□□□□ -1.01
HMGCS1-203ENST00000507004 C22orf24Q9Y442 160 aa8.73□□□□□ -1.01
HMGCS1-203ENST00000507004 H3BRM9 83 aa8.72□□□□□ -1.01
HMGCS1-203ENST00000507004 PMVKQ15126 192 aa8.72□□□□□ -1.01
HMGCS1-203ENST00000507004 FA2HQ7L5A8 372 aa8.72□□□□□ -1.01
HMGCS1-203ENST00000507004 PRR26Q8N8Z3 221 aa8.72□□□□□ -1.01
HMGCS1-203ENST00000507004 LRP2P98164 4655 aa8.71□□□□□ -1.01
HMGCS1-203ENST00000507004 SMIM1B2RUZ4 78 aa8.71□□□□□ -1.02
HMGCS1-203ENST00000507004 RHEBQ15382 184 aa8.71□□□□□ -1.02
HMGCS1-203ENST00000507004 COX7B2Q8TF08 81 aa8.71□□□□□ -1.02
HMGCS1-203ENST00000507004 MRPL55Q7Z7F7 128 aaKnown RBP8.7□□□□□ -1.02
HMGCS1-203ENST00000507004 CST9LQ9H4G1 147 aa8.7□□□□□ -1.02
HMGCS1-203ENST00000507004 XAGE1AQ9HD64 81 aa8.7□□□□□ -1.02
HMGCS1-203ENST00000507004 KRTAP1-4P0C5Y4 121 aa8.69□□□□□ -1.02
HMGCS1-203ENST00000507004 RPL28P46779 137 aaKnown RBP8.69□□□□□ -1.02
HMGCS1-203ENST00000507004 FABP9Q0Z7S8 132 aa8.69□□□□□ -1.02
HMGCS1-203ENST00000507004 ATP5LO75964 103 aa8.67□□□□□ -1.02
HMGCS1-203ENST00000507004 SFTA2Q6UW10 78 aa8.67□□□□□ -1.02
HMGCS1-203ENST00000507004 BCE1O60756 84 aa8.66□□□□□ -1.02
HMGCS1-203ENST00000507004 IFITM2Q01629 132 aa8.66□□□□□ -1.02
HMGCS1-203ENST00000507004 C10orf91Q5T1B1 145 aa8.66□□□□□ -1.02
HMGCS1-203ENST00000507004 COMMD7Q86VX2 200 aa8.66□□□□□ -1.02
HMGCS1-203ENST00000507004 IGLV5-37A0A075B6J1 123 aa8.65□□□□□ -1.02
HMGCS1-203ENST00000507004 RPS10P5Q9NQ39 176 aa8.65□□□□□ -1.02
HMGCS1-203ENST00000507004 SPINK8P0C7L1 97 aa8.64□□□□□ -1.03
HMGCS1-203ENST00000507004 IGLC3P0DOY3 106 aa8.64□□□□□ -1.03
HMGCS1-203ENST00000507004 RAB5BP61020 215 aa8.64□□□□□ -1.03
HMGCS1-203ENST00000507004 NKAPP1Q8N9T2 125 aa8.64□□□□□ -1.03
HMGCS1-203ENST00000507004 HBDP02042 147 aa8.63□□□□□ -1.03
HMGCS1-203ENST00000507004 LINC00614P0C842 121 aa8.63□□□□□ -1.03
HMGCS1-203ENST00000507004 LINC00167Q96N53 147 aa8.63□□□□□ -1.03
HMGCS1-203ENST00000507004 COX17Q14061 63 aa8.62□□□□□ -1.03
HMGCS1-203ENST00000507004 TRAPPC1Q9Y5R8 145 aa8.62□□□□□ -1.03
HMGCS1-203ENST00000507004 IGLV5-39A0A0G2JS06 123 aa8.61□□□□□ -1.03
HMGCS1-203ENST00000507004 NDUFA5Q16718 116 aa8.61□□□□□ -1.03
HMGCS1-203ENST00000507004 CRYGAP11844 174 aa8.6□□□□□ -1.03
HMGCS1-203ENST00000507004 NDUFA6P56556 154 aa8.6□□□□□ -1.03
HMGCS1-203ENST00000507004 RPL24P83731 157 aaKnown RBP8.6□□□□□ -1.03
HMGCS1-203ENST00000507004 C18orf32Q8TCD1 76 aa8.6□□□□□ -1.03
HMGCS1-203ENST00000507004 RPL37AP8A6NKH3 93 aa8.58□□□□□ -1.04
HMGCS1-203ENST00000507004 SNAPINO95295 136 aa8.58□□□□□ -1.04
HMGCS1-203ENST00000507004 ZNF22P17026 224 aaPredicted RBP8.58□□□□□ -1.04
HMGCS1-203ENST00000507004 UBE2AP49459 152 aa8.58□□□□□ -1.04
HMGCS1-203ENST00000507004 ERG28Q9UKR5 140 aa8.58□□□□□ -1.04
HMGCS1-203ENST00000507004 A0A096LNJ9 63 aa8.57□□□□□ -1.04
HMGCS1-203ENST00000507004 SVBPQ8N300 66 aa8.57□□□□□ -1.04
HMGCS1-203ENST00000507004 GAGE10A6NGK3 116 aa8.56□□□□□ -1.04
HMGCS1-203ENST00000507004 PFN2P35080 140 aa8.56□□□□□ -1.04
HMGCS1-203ENST00000507004 FAM229BQ4G0N7 80 aa8.56□□□□□ -1.04
HMGCS1-203ENST00000507004 BAGE3Q86Y29 109 aa8.56□□□□□ -1.04
HMGCS1-203ENST00000507004 TYMSOSQ8TAI1 123 aa8.56□□□□□ -1.04
HMGCS1-203ENST00000507004 CTAG1AP78358 180 aa8.55□□□□□ -1.04
HMGCS1-203ENST00000507004 PRR4Q16378 134 aa8.55□□□□□ -1.04
HMGCS1-203ENST00000507004 TMEM170BQ5T4T1 132 aa8.55□□□□□ -1.04
HMGCS1-203ENST00000507004 URB1-AS1Q96HZ7 61 aa8.55□□□□□ -1.04
HMGCS1-203ENST00000507004 APOC3P02656 99 aa8.54□□□□□ -1.04
HMGCS1-203ENST00000507004 KRTAP13-1Q8IUC0 172 aa8.54□□□□□ -1.04
HMGCS1-203ENST00000507004 SND1-IT1Q9HBX3 110 aa8.54□□□□□ -1.04
HMGCS1-203ENST00000507004 VPREB1P12018 145 aa8.53□□□□□ -1.04
HMGCS1-203ENST00000507004 CHCHD1Q96BP2 118 aaKnown RBP8.53□□□□□ -1.04
HMGCS1-203ENST00000507004 RNF213Q63HN8 5207 aa8.53□□□□□ -1.04
HMGCS1-203ENST00000507004 IGKV2-28A0A075B6P5 120 aa8.52□□□□□ -1.05
HMGCS1-203ENST00000507004 TRAV12-1A0A0B4J245 112 aa8.52□□□□□ -1.05
HMGCS1-203ENST00000507004 C11orf86A6NJI1 115 aa8.52□□□□□ -1.05
HMGCS1-203ENST00000507004 IGKV2D-28P01615 120 aa8.52□□□□□ -1.05
HMGCS1-203ENST00000507004 CHTOPQ9Y3Y2 248 aaKnown RBP8.52□□□□□ -1.05
HMGCS1-203ENST00000507004 A0A087X002 238 aa8.51□□□□□ -1.05
HMGCS1-203ENST00000507004 LINC00587B1AMM8 73 aa8.51□□□□□ -1.05
HMGCS1-203ENST00000507004 PMCHL1Q16048 86 aa8.5□□□□□ -1.05
HMGCS1-203ENST00000507004 FAM19A1Q7Z5A9 133 aa8.5□□□□□ -1.05
HMGCS1-203ENST00000507004 ZNF625Q96I27 306 aaPredicted RBP8.5□□□□□ -1.05
HMGCS1-203ENST00000507004 KRTAP3-3Q9BYR6 98 aa8.5□□□□□ -1.05
HMGCS1-203ENST00000507004 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 98 ms