RNA–Protein interactions for RNA: ENST00000506783.5

PHF3-208, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 3,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-208ENST00000506783 HIGD2BQ4VC39 106 aa6.8□□□□□ -1.32
PHF3-208ENST00000506783 LINC00337Q8N6G1 96 aa6.79□□□□□ -1.32
PHF3-208ENST00000506783 FAM104AQ969W3 186 aa6.79□□□□□ -1.32
PHF3-208ENST00000506783 LITAFQ99732 161 aa6.79□□□□□ -1.32
PHF3-208ENST00000506783 CSMD3Q7Z407 3707 aa6.79□□□□□ -1.32
PHF3-208ENST00000506783 TRBV30A0A0K0K1B3 111 aa6.79□□□□□ -1.32
PHF3-208ENST00000506783 HILS1P60008 231 aa6.79□□□□□ -1.32
PHF3-208ENST00000506783 DAD1P61803 113 aa6.79□□□□□ -1.32
PHF3-208ENST00000506783 SCXQ7RTU7 201 aa6.79□□□□□ -1.32
PHF3-208ENST00000506783 C6orf223Q8N319 242 aa6.79□□□□□ -1.32
PHF3-208ENST00000506783 SMIM11BQ8TCY0 68 aa6.79□□□□□ -1.32
PHF3-208ENST00000506783 ODF3Q96PU9 254 aa6.79□□□□□ -1.32
PHF3-208ENST00000506783 LST1O00453 97 aa6.78□□□□□ -1.32
PHF3-208ENST00000506783 C9orf153Q5TBE3 101 aa6.78□□□□□ -1.32
PHF3-208ENST00000506783 CCL18P55774 89 aa6.78□□□□□ -1.32
PHF3-208ENST00000506783 HAMPP81172 84 aa6.78□□□□□ -1.32
PHF3-208ENST00000506783 C9orf129Q5T035 196 aaKnown RBP6.78□□□□□ -1.32
PHF3-208ENST00000506783 TMEM86BQ8N661 226 aa6.78□□□□□ -1.32
PHF3-208ENST00000506783 TIRAPP58753 221 aa6.78□□□□□ -1.32
PHF3-208ENST00000506783 SS18Q15532 418 aa6.78□□□□□ -1.32
PHF3-208ENST00000506783 PYGO1Q9Y3Y4 419 aa6.78□□□□□ -1.32
PHF3-208ENST00000506783 STAB2Q8WWQ8 2551 aa6.77□□□□□ -1.33
PHF3-208ENST00000506783 NDUFA1O15239 70 aa6.77□□□□□ -1.33
PHF3-208ENST00000506783 RPL18AQ02543 176 aaKnown RBP6.77□□□□□ -1.33
PHF3-208ENST00000506783 DEFB105AQ8NG35 78 aa6.77□□□□□ -1.33
PHF3-208ENST00000506783 TRBV6-8A0A0A6YYG3 113 aa6.77□□□□□ -1.33
PHF3-208ENST00000506783 A0A096LNT2 108 aa6.76□□□□□ -1.33
PHF3-208ENST00000506783 COX7A2LO14548 114 aa6.76□□□□□ -1.33
PHF3-208ENST00000506783 OXLD1Q5BKU9 147 aa6.76□□□□□ -1.33
PHF3-208ENST00000506783 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
PHF3-208ENST00000506783 RETNQ9HD89 108 aa6.76□□□□□ -1.33
PHF3-208ENST00000506783 RPL32P62910 135 aaKnown RBP6.75□□□□□ -1.33
PHF3-208ENST00000506783 TRAV23DV6A0A075B6W5 121 aa6.75□□□□□ -1.33
PHF3-208ENST00000506783 TRBV10-1A0A0K0K1A3 114 aa6.75□□□□□ -1.33
PHF3-208ENST00000506783 IGHV4-28A0A0C4DH34 117 aa6.74□□□□□ -1.33
PHF3-208ENST00000506783 C16orf74Q96GX8 76 aa6.74□□□□□ -1.33
PHF3-208ENST00000506783 HERV-K104P63124 156 aa6.74□□□□□ -1.33
PHF3-208ENST00000506783 CXCL5P42830 114 aa6.74□□□□□ -1.33
PHF3-208ENST00000506783 C6orf99Q4VX62 202 aa6.73□□□□□ -1.33
PHF3-208ENST00000506783 UNQ6190/PRO20217Q6UXQ8 127 aa6.73□□□□□ -1.33
PHF3-208ENST00000506783 TRAV13-2A0A0B4J235 113 aa6.73□□□□□ -1.33
PHF3-208ENST00000506783 LINC00959A0A1B0GUT2 108 aa6.73□□□□□ -1.33
PHF3-208ENST00000506783 TRAV25A0A0B4J276 109 aa6.73□□□□□ -1.33
PHF3-208ENST00000506783 A0A1B0GX51 115 aa6.73□□□□□ -1.33
PHF3-208ENST00000506783 SPANXDQ9BXN6 97 aa6.73□□□□□ -1.33
PHF3-208ENST00000506783 SPANXCQ9NY87 97 aa6.73□□□□□ -1.33
PHF3-208ENST00000506783 H3BT86 120 aa6.72□□□□□ -1.33
PHF3-208ENST00000506783 FHL2Q14192 279 aa6.72□□□□□ -1.33
PHF3-208ENST00000506783 CHCHD10Q8WYQ3 142 aaPredicted RBP6.72□□□□□ -1.33
PHF3-208ENST00000506783 hADV29S1A0JD25 119 aa6.72□□□□□ -1.33
PHF3-208ENST00000506783 GIG44P09565 113 aaPredicted RBP6.71□□□□□ -1.33
PHF3-208ENST00000506783 SMCR5Q8TEV8 140 aa6.71□□□□□ -1.33
PHF3-208ENST00000506783 NHLRC4P0CG21 123 aaPredicted RBP6.71□□□□□ -1.34
PHF3-208ENST00000506783 COPS9Q8WXC6 57 aa6.71□□□□□ -1.34
PHF3-208ENST00000506783 LOC107984640A0A0U1RRK4 108 aa6.71□□□□□ -1.34
PHF3-208ENST00000506783 BRI3O95415 125 aa6.71□□□□□ -1.34
PHF3-208ENST00000506783 REG3AQ06141 175 aa6.71□□□□□ -1.34
PHF3-208ENST00000506783 IGKV2-28A0A075B6P5 120 aa6.7□□□□□ -1.34
PHF3-208ENST00000506783 IGKV2D-28P01615 120 aa6.7□□□□□ -1.34
PHF3-208ENST00000506783 CELA1Q9UNI1 258 aa6.7□□□□□ -1.34
PHF3-208ENST00000506783 BEAN1Q3B7T3 259 aa6.69□□□□□ -1.34
PHF3-208ENST00000506783 C10orf25Q5T742 122 aa6.69□□□□□ -1.34
PHF3-208ENST00000506783 SPAG11BQ08648 103 aa6.69□□□□□ -1.34
PHF3-208ENST00000506783 KLK9Q2XQG4 91 aa6.69□□□□□ -1.34
PHF3-208ENST00000506783 PRO0255Q9UI72 69 aa6.69□□□□□ -1.34
PHF3-208ENST00000506783 IGKV2D-24A0A075B6R9 120 aa6.68□□□□□ -1.34
PHF3-208ENST00000506783 ENHOQ6UWT2 76 aa6.68□□□□□ -1.34
PHF3-208ENST00000506783 LINC00846Q9NV44 126 aa6.68□□□□□ -1.34
PHF3-208ENST00000506783 ZNF561-AS1K7EIQ3 104 aa6.67□□□□□ -1.34
PHF3-208ENST00000506783 KRTAP1-1Q07627 177 aa6.67□□□□□ -1.34
PHF3-208ENST00000506783 ORMDL1Q9P0S3 153 aa6.67□□□□□ -1.34
PHF3-208ENST00000506783 IGHV3OR16-9A0A0B4J2B5 98 aa6.67□□□□□ -1.34
PHF3-208ENST00000506783 CYSRT1A8MQ03 144 aa6.67□□□□□ -1.34
PHF3-208ENST00000506783 IGLV1-51P01701 117 aa6.67□□□□□ -1.34
PHF3-208ENST00000506783 INAFM2P0DMQ5 153 aa6.66□□□□□ -1.34
PHF3-208ENST00000506783 FAM19A1Q7Z5A9 133 aa6.66□□□□□ -1.34
PHF3-208ENST00000506783 TRBV6-4A0A1B0GX49 114 aa6.66□□□□□ -1.34
PHF3-208ENST00000506783 C9orf66Q5T8R8 295 aa6.66□□□□□ -1.34
PHF3-208ENST00000506783 CITED1Q99966 193 aa6.66□□□□□ -1.34
PHF3-208ENST00000506783 IGLV5-39A0A0G2JS06 123 aa6.66□□□□□ -1.34
PHF3-208ENST00000506783 FSHBP01225 129 aa6.66□□□□□ -1.34
PHF3-208ENST00000506783 RNF152Q8N8N0 203 aa6.65□□□□□ -1.34
PHF3-208ENST00000506783 Q6ZQY7 126 aa6.65□□□□□ -1.34
PHF3-208ENST00000506783 DPH3Q96FX2 82 aa6.65□□□□□ -1.34
PHF3-208ENST00000506783 SBSPONQ8IVN8 264 aa6.65□□□□□ -1.35
PHF3-208ENST00000506783 CAMK2N2Q96S95 79 aa6.64□□□□□ -1.35
PHF3-208ENST00000506783 TMEM126AQ9H061 195 aa6.64□□□□□ -1.35
PHF3-208ENST00000506783 KRTAP24-1Q3LI83 254 aa6.64□□□□□ -1.35
PHF3-208ENST00000506783 PLAC8L1A1L4L8 177 aa6.64□□□□□ -1.35
PHF3-208ENST00000506783 KRTAP10-3P60369 221 aa6.64□□□□□ -1.35
PHF3-208ENST00000506783 Q8N9L7 120 aa6.64□□□□□ -1.35
PHF3-208ENST00000506783 SRRM2Q9UQ35 2752 aaKnown RBP6.63□□□□□ -1.35
PHF3-208ENST00000506783 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.63□□□□□ -1.35
PHF3-208ENST00000506783 C20orf197Q8N268 126 aa6.63□□□□□ -1.35
PHF3-208ENST00000506783 DSCR8Q96T75 97 aa6.63□□□□□ -1.35
PHF3-208ENST00000506783 LINC00643Q86TS7 51 aa6.63□□□□□ -1.35
PHF3-208ENST00000506783 SNURFQ9Y675 71 aa6.63□□□□□ -1.35
PHF3-208ENST00000506783 A0A087WZ39 114 aa6.62□□□□□ -1.35
PHF3-208ENST00000506783 A0A096LNI7 61 aa6.62□□□□□ -1.35
PHF3-208ENST00000506783 RPL37AP8A6NKH3 93 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms