RNA–Protein interactions for RNA: ENST00000506098.5

NUP54-204, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-204ENST00000506098 PAPPA-AS1Q5QFB9 102 aa4.88□□□□□ -1.63
NUP54-204ENST00000506098 TEN1Q86WV5 123 aa4.88□□□□□ -1.63
NUP54-204ENST00000506098 UBE2DNLQ8IWF7 75 aa4.88□□□□□ -1.63
NUP54-204ENST00000506098 C3orf22Q8N5N4 141 aa4.88□□□□□ -1.63
NUP54-204ENST00000506098 IFI27L1Q96BM0 104 aa4.88□□□□□ -1.63
NUP54-204ENST00000506098 AMELXQ99217 191 aa4.88□□□□□ -1.63
NUP54-204ENST00000506098 DPM2O94777 84 aa4.87□□□□□ -1.63
NUP54-204ENST00000506098 NMUP48645 174 aa4.87□□□□□ -1.63
NUP54-204ENST00000506098 C1orf195Q5TG92 126 aa4.87□□□□□ -1.63
NUP54-204ENST00000506098 DGAT2L7PQ6IED9 249 aa4.87□□□□□ -1.63
NUP54-204ENST00000506098 LINC00173Q6ZV60 143 aa4.87□□□□□ -1.63
NUP54-204ENST00000506098 Q8N3U1 123 aa4.87□□□□□ -1.63
NUP54-204ENST00000506098 LINC00476Q8WZB0 136 aa4.87□□□□□ -1.63
NUP54-204ENST00000506098 OPRPNQ99935 248 aaPredicted RBP4.87□□□□□ -1.63
NUP54-204ENST00000506098 PRR34Q9NV39 138 aa4.87□□□□□ -1.63
NUP54-204ENST00000506098 TRAV12-1A0A0B4J245 112 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 TRBV7-7A0A0K0K1E9 115 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 A0A1B0GWB2 263 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 IBA57-AS1B1ANH7 110 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 IGHV3-30P01768 117 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 IGHV3-33P01772 117 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 ANGP03950 147 aaKnown RBP4.86□□□□□ -1.63
NUP54-204ENST00000506098 IGHV3-30-3P0DP02 117 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 IGHV3-30-5P0DP03 117 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 HERVK_113P63121 156 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 LINC01545Q5VT33 79 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 FAM19A3Q7Z5A8 133 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 C10orf126Q8N4M7 172 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 LAMTOR3Q9UHA4 124 aa4.86□□□□□ -1.63
NUP54-204ENST00000506098 FAM240AA0A1B0GVK7 77 aa4.85□□□□□ -1.63
NUP54-204ENST00000506098 NDUFC2-KCTD14E9PQ53 114 aa4.85□□□□□ -1.63
NUP54-204ENST00000506098 NDUFC2O95298 119 aa4.85□□□□□ -1.63
NUP54-204ENST00000506098 CD164Q04900 197 aa4.85□□□□□ -1.63
NUP54-204ENST00000506098 REG3AQ06141 175 aa4.85□□□□□ -1.63
NUP54-204ENST00000506098 C4orf26Q17RF5 130 aa4.85□□□□□ -1.63
NUP54-204ENST00000506098 C9orf153Q5TBE3 101 aa4.85□□□□□ -1.63
NUP54-204ENST00000506098 ENHOQ6UWT2 76 aa4.85□□□□□ -1.63
NUP54-204ENST00000506098 LINC00269Q8N2A0 174 aa4.85□□□□□ -1.63
NUP54-204ENST00000506098 KLK12Q9UKR0 248 aa4.85□□□□□ -1.63
NUP54-204ENST00000506098 TRBV20-1A0A075B6N2 111 aa4.84□□□□□ -1.63
NUP54-204ENST00000506098 TRAV8-4A0A0B4J246 113 aa4.84□□□□□ -1.63
NUP54-204ENST00000506098 NBDYA0A0U1RRE5 68 aa4.84□□□□□ -1.63
NUP54-204ENST00000506098 LINC00959A0A1B0GUT2 108 aa4.84□□□□□ -1.63
NUP54-204ENST00000506098 PRSS1P07477 247 aa4.84□□□□□ -1.63
NUP54-204ENST00000506098 UBE2D1P51668 147 aa4.84□□□□□ -1.63
NUP54-204ENST00000506098 MIAQ16674 131 aa4.84□□□□□ -1.63
NUP54-204ENST00000506098 RNASE13Q5GAN3 156 aaKnown RBP4.84□□□□□ -1.63
NUP54-204ENST00000506098 ZC2HC1BQ5TFG8 222 aa4.84□□□□□ -1.63
NUP54-204ENST00000506098 Q5XG85 94 aa4.84□□□□□ -1.63
NUP54-204ENST00000506098 KRTAP1-5Q9BYS1 174 aa4.84□□□□□ -1.63
NUP54-204ENST00000506098 FRAS1Q86XX4 4008 aa4.84□□□□□ -1.64
NUP54-204ENST00000506098 TRAV8-3A0A0A6YYJ7 113 aa4.83□□□□□ -1.64
NUP54-204ENST00000506098 LY6G6CO95867 125 aa4.83□□□□□ -1.64
NUP54-204ENST00000506098 TNP2Q05952 138 aa4.83□□□□□ -1.64
NUP54-204ENST00000506098 KRTAP26-1Q6PEX3 210 aa4.83□□□□□ -1.64
NUP54-204ENST00000506098 CD164L2Q6UWJ8 174 aa4.83□□□□□ -1.64
NUP54-204ENST00000506098 Q6ZR54 194 aa4.83□□□□□ -1.64
NUP54-204ENST00000506098 FAM19A1Q7Z5A9 133 aa4.83□□□□□ -1.64
NUP54-204ENST00000506098 COPS9Q8WXC6 57 aa4.83□□□□□ -1.64
NUP54-204ENST00000506098 DPH3Q96FX2 82 aa4.83□□□□□ -1.64
NUP54-204ENST00000506098 NAA38Q9BRA0 125 aaKnown RBP4.83□□□□□ -1.64
NUP54-204ENST00000506098 IGLV4-69A0A075B6H9 119 aa4.82□□□□□ -1.64
NUP54-204ENST00000506098 LOC107984640A0A0U1RRK4 108 aa4.82□□□□□ -1.64
NUP54-204ENST00000506098 F8VRH5 84 aa4.82□□□□□ -1.64
NUP54-204ENST00000506098 CRPP02741 224 aa4.82□□□□□ -1.64
NUP54-204ENST00000506098 SS18Q15532 418 aa4.82□□□□□ -1.64
NUP54-204ENST00000506098 LINC01620Q4KN68 170 aa4.82□□□□□ -1.64
NUP54-204ENST00000506098 LINC00242Q5T6M2 205 aa4.82□□□□□ -1.64
NUP54-204ENST00000506098 GAGE2AQ6NT46 116 aa4.82□□□□□ -1.64
NUP54-204ENST00000506098 NFE4Q86UQ8 179 aa4.82□□□□□ -1.64
NUP54-204ENST00000506098 UBE2WQ96B02 151 aa4.82□□□□□ -1.64
NUP54-204ENST00000506098 SACSQ9NZJ4 4579 aa4.82□□□□□ -1.64
NUP54-204ENST00000506098 IGLV5-45A0A087WSX0 123 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 TRAV13-1A0A0B4J241 112 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 IGHV3OR16-9A0A0B4J2B5 98 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 A0A0J9YXV3 536 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 LCE6AA0A183 80 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 COX7CP15954 63 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 COX6A2Q02221 97 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 CLPSL2Q6UWE3 100 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 ANKRD29Q8N6D5 301 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 CHCHD10Q8WYQ3 142 aaPredicted RBP4.81□□□□□ -1.64
NUP54-204ENST00000506098 RMI2Q96E14 147 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 MRPL35Q9NZE8 188 aaKnown RBP4.81□□□□□ -1.64
NUP54-204ENST00000506098 DNAH2Q9P225 4427 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 HYDINQ4G0P3 5121 aa4.81□□□□□ -1.64
NUP54-204ENST00000506098 DNAH10Q8IVF4 4471 aa4.8□□□□□ -1.64
NUP54-204ENST00000506098 IGKV3OR2-268A0A0C4DH90 116 aa4.8□□□□□ -1.64
NUP54-204ENST00000506098 EPM2AB3EWF7 344 aa4.8□□□□□ -1.64
NUP54-204ENST00000506098 TRACP01848 142 aa4.8□□□□□ -1.64
NUP54-204ENST00000506098 SCGB1C2P0DMR2 95 aa4.8□□□□□ -1.64
NUP54-204ENST00000506098 CXCL5P42830 114 aa4.8□□□□□ -1.64
NUP54-204ENST00000506098 LINC01561Q8N1V8 128 aa4.8□□□□□ -1.64
NUP54-204ENST00000506098 IGLV10-54A0A075B6I4 117 aa4.79□□□□□ -1.64
NUP54-204ENST00000506098 A0A087WZ39 114 aa4.79□□□□□ -1.64
NUP54-204ENST00000506098 hDV102S1A0JD36 115 aa4.79□□□□□ -1.64
NUP54-204ENST00000506098 C11orf86A6NJI1 115 aa4.79□□□□□ -1.64
NUP54-204ENST00000506098 J3QQQ9 107 aa4.79□□□□□ -1.64
NUP54-204ENST00000506098 IGKCP01834 107 aa4.79□□□□□ -1.64
NUP54-204ENST00000506098 ACYP1P07311 99 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 185.2 ms