RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 A0A0B4J2C4 111 aa9.97□□□□□ -0.81
TCOF1-207ENST00000504761 TEN1Q86WV5 123 aa9.97□□□□□ -0.81
TCOF1-207ENST00000504761 SMIM1B2RUZ4 78 aa9.97□□□□□ -0.81
TCOF1-207ENST00000504761 TRIAP1O43715 76 aa9.96□□□□□ -0.82
TCOF1-207ENST00000504761 AMELXQ99217 191 aa9.96□□□□□ -0.82
TCOF1-207ENST00000504761 C9orf116Q5BN46 136 aaPredicted RBP9.95□□□□□ -0.82
TCOF1-207ENST00000504761 KRTAP1-1Q07627 177 aa9.95□□□□□ -0.82
TCOF1-207ENST00000504761 CITED1Q99966 193 aa9.95□□□□□ -0.82
TCOF1-207ENST00000504761 DCHS1Q96JQ0 3298 aa9.95□□□□□ -0.82
TCOF1-207ENST00000504761 NTM-AS1Q6ZSK4 140 aa9.95□□□□□ -0.82
TCOF1-207ENST00000504761 SYCNQ0VAF6 134 aa9.95□□□□□ -0.82
TCOF1-207ENST00000504761 ZANQ9Y493 2812 aa9.94□□□□□ -0.82
TCOF1-207ENST00000504761 ASPMQ8IZT6 3477 aa9.94□□□□□ -0.82
TCOF1-207ENST00000504761 DIRC1Q969H9 104 aa9.94□□□□□ -0.82
TCOF1-207ENST00000504761 LAMA5O15230 3695 aa9.94□□□□□ -0.82
TCOF1-207ENST00000504761 UNQ6190/PRO20217Q6UXQ8 127 aa9.94□□□□□ -0.82
TCOF1-207ENST00000504761 SLPIP03973 132 aa9.94□□□□□ -0.82
TCOF1-207ENST00000504761 UBL5Q9BZL1 73 aa9.93□□□□□ -0.82
TCOF1-207ENST00000504761 UTP20O75691 2785 aaKnown RBP9.93□□□□□ -0.82
TCOF1-207ENST00000504761 TRBV10-2A0A0K0K1G8 114 aa9.93□□□□□ -0.82
TCOF1-207ENST00000504761 WFDC10BQ8IUB3 73 aa9.93□□□□□ -0.82
TCOF1-207ENST00000504761 CYSRT1A8MQ03 144 aa9.93□□□□□ -0.82
TCOF1-207ENST00000504761 X6R8D5 127 aa9.92□□□□□ -0.82
TCOF1-207ENST00000504761 IL17DQ8TAD2 202 aa9.92□□□□□ -0.82
TCOF1-207ENST00000504761 ADAMTSL4-AS1Q5T5F5 129 aa9.92□□□□□ -0.82
TCOF1-207ENST00000504761 NBEAL2Q6ZNJ1 2754 aa9.91□□□□□ -0.82
TCOF1-207ENST00000504761 KRTAP10-3P60369 221 aa9.91□□□□□ -0.82
TCOF1-207ENST00000504761 NBEAL1Q6ZS30 2694 aa9.91□□□□□ -0.82
TCOF1-207ENST00000504761 C6orf99Q4VX62 202 aa9.91□□□□□ -0.82
TCOF1-207ENST00000504761 FOXI1Q12951 378 aa9.9□□□□□ -0.82
TCOF1-207ENST00000504761 CSDC2Q9Y534 153 aaKnown RBP9.9□□□□□ -0.82
TCOF1-207ENST00000504761 FAM19A5Q7Z5A7 132 aaPredicted RBP9.9□□□□□ -0.83
TCOF1-207ENST00000504761 A0A087WZ39 114 aa9.89□□□□□ -0.83
TCOF1-207ENST00000504761 LYPD5Q6UWN5 251 aa9.89□□□□□ -0.83
TCOF1-207ENST00000504761 RELNP78509 3460 aa9.89□□□□□ -0.83
TCOF1-207ENST00000504761 IGKV2-28A0A075B6P5 120 aa9.89□□□□□ -0.83
TCOF1-207ENST00000504761 IGKV2D-28P01615 120 aa9.89□□□□□ -0.83
TCOF1-207ENST00000504761 PRR3P79522 188 aaKnown RBP9.88□□□□□ -0.83
TCOF1-207ENST00000504761 HIGD2AQ9BW72 106 aa9.88□□□□□ -0.83
TCOF1-207ENST00000504761 SPANXDQ9BXN6 97 aa9.88□□□□□ -0.83
TCOF1-207ENST00000504761 TEX49A0A1B0GTD5 131 aa9.88□□□□□ -0.83
TCOF1-207ENST00000504761 TIMM17BO60830 172 aa9.88□□□□□ -0.83
TCOF1-207ENST00000504761 Q8IZM0 81 aa9.88□□□□□ -0.83
TCOF1-207ENST00000504761 H3BT86 120 aa9.87□□□□□ -0.83
TCOF1-207ENST00000504761 COX7BP24311 80 aa9.87□□□□□ -0.83
TCOF1-207ENST00000504761 C6orf223Q8N319 242 aa9.87□□□□□ -0.83
TCOF1-207ENST00000504761 C14orf132Q9NPU4 83 aa9.87□□□□□ -0.83
TCOF1-207ENST00000504761 UBE2AP49459 152 aa9.87□□□□□ -0.83
TCOF1-207ENST00000504761 CRYBG3Q68DQ2 2970 aa9.87□□□□□ -0.83
TCOF1-207ENST00000504761 SBSPONQ8IVN8 264 aa9.86□□□□□ -0.83
TCOF1-207ENST00000504761 Q8N3U1 123 aa9.86□□□□□ -0.83
TCOF1-207ENST00000504761 LY6G6CO95867 125 aa9.85□□□□□ -0.83
TCOF1-207ENST00000504761 TRBV30A0A0K0K1B3 111 aa9.84□□□□□ -0.83
TCOF1-207ENST00000504761 CR1P17927 2039 aa9.84□□□□□ -0.83
TCOF1-207ENST00000504761 IGKV3D-7A0A0C4DH55 119 aa9.84□□□□□ -0.83
TCOF1-207ENST00000504761 A0A1B0GUV1 79 aa9.84□□□□□ -0.83
TCOF1-207ENST00000504761 WFDC9Q8NEX5 89 aa9.84□□□□□ -0.83
TCOF1-207ENST00000504761 A0A096LNI7 61 aa9.84□□□□□ -0.83
TCOF1-207ENST00000504761 hADV29S1A0JD25 119 aa9.84□□□□□ -0.83
TCOF1-207ENST00000504761 CDK2AP2O75956 126 aa9.84□□□□□ -0.83
TCOF1-207ENST00000504761 SMIM11BQ8TCY0 68 aa9.84□□□□□ -0.83
TCOF1-207ENST00000504761 LINC01546A6NGU7 62 aa9.83□□□□□ -0.84
TCOF1-207ENST00000504761 C14orf177Q52M58 125 aa9.83□□□□□ -0.84
TCOF1-207ENST00000504761 RPL37AP8A6NKH3 93 aa9.82□□□□□ -0.84
TCOF1-207ENST00000504761 RBM3P98179 157 aaKnown RBP9.82□□□□□ -0.84
TCOF1-207ENST00000504761 TMEM256-PLSCR3K7ERE1 68 aa9.81□□□□□ -0.84
TCOF1-207ENST00000504761 GIG44P09565 113 aaPredicted RBP9.81□□□□□ -0.84
TCOF1-207ENST00000504761 Q8NAQ8 132 aa9.81□□□□□ -0.84
TCOF1-207ENST00000504761 C19orf73Q9NVV2 129 aa9.8□□□□□ -0.84
TCOF1-207ENST00000504761 TRACP01848 142 aa9.8□□□□□ -0.84
TCOF1-207ENST00000504761 ESRGQ1W209 222 aa9.8□□□□□ -0.84
TCOF1-207ENST00000504761 SPATA3Q8NHX4 192 aa9.8□□□□□ -0.84
TCOF1-207ENST00000504761 APCP25054 2843 aa9.79□□□□□ -0.84
TCOF1-207ENST00000504761 IGHV3OR16-9A0A0B4J2B5 98 aa9.79□□□□□ -0.84
TCOF1-207ENST00000504761 FUSP35637 526 aaKnown RBP eCLIP9.79□□□□□ -0.84
TCOF1-207ENST00000504761 CSNK1G2-AS1Q8NCQ2 148 aa9.79□□□□□ -0.84
TCOF1-207ENST00000504761 FAM19A1Q7Z5A9 133 aa9.79□□□□□ -0.84
TCOF1-207ENST00000504761 JMJD7-PLA2G4BH0Y9G9 81 aa9.78□□□□□ -0.84
TCOF1-207ENST00000504761 TRAV23DV6A0A075B6W5 121 aa9.78□□□□□ -0.84
TCOF1-207ENST00000504761 Q6ZQY7 126 aa9.78□□□□□ -0.84
TCOF1-207ENST00000504761 USP17L23D6RBM5 183 aa9.78□□□□□ -0.84
TCOF1-207ENST00000504761 PKIGQ9Y2B9 76 aa9.78□□□□□ -0.84
TCOF1-207ENST00000504761 A8MTW9 85 aa9.77□□□□□ -0.85
TCOF1-207ENST00000504761 LST1O00453 97 aa9.76□□□□□ -0.85
TCOF1-207ENST00000504761 ASH1LQ9NR48 2969 aaKnown RBP9.76□□□□□ -0.85
TCOF1-207ENST00000504761 NSD1Q96L73 2696 aaPredicted RBP9.76□□□□□ -0.85
TCOF1-207ENST00000504761 ACYP1P07311 99 aa9.75□□□□□ -0.85
TCOF1-207ENST00000504761 KRTAP10-11P60412 298 aa9.75□□□□□ -0.85
TCOF1-207ENST00000504761 COX17Q14061 63 aa9.75□□□□□ -0.85
TCOF1-207ENST00000504761 NREPQ16612 68 aa9.74□□□□□ -0.85
TCOF1-207ENST00000504761 CELSR2Q9HCU4 2923 aa9.74□□□□□ -0.85
TCOF1-207ENST00000504761 M0R378 163 aa9.74□□□□□ -0.85
TCOF1-207ENST00000504761 IGLV5-39A0A0G2JS06 123 aa9.73□□□□□ -0.85
TCOF1-207ENST00000504761 EGFEM1PQ0D2K5 195 aa9.73□□□□□ -0.85
TCOF1-207ENST00000504761 HIVEP1P15822 2718 aa9.73□□□□□ -0.85
TCOF1-207ENST00000504761 TRBV10-3A0A0K0K1G6 114 aa9.73□□□□□ -0.85
TCOF1-207ENST00000504761 LRCOL1A6NCL2 159 aa9.73□□□□□ -0.85
TCOF1-207ENST00000504761 NUPR2A6NF83 97 aa9.73□□□□□ -0.85
TCOF1-207ENST00000504761 HRNRQ86YZ3 2850 aaPredicted RBP9.72□□□□□ -0.85
TCOF1-207ENST00000504761 ZNF73O43830 326 aaPredicted RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms