RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 C17orf112F2Z3M2 114 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 CCDC179H3BU77 68 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 GNRH2O43555 120 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SSSCA1O60232 199 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 DEFA4P12838 97 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 KRTAP10-8P60410 259 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SERF2P84101 59 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 HSD52Q0P140 79 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 FXYD3Q14802 87 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 CLLU1Q5K131 121 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 COL5A1-AS1Q5SY13 56 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SLC35E3Q7Z769 313 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 Q8NAQ8 132 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SFT2D1Q8WV19 159 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 USMG5Q96IX5 58 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 IGHV3OR16-8A0A075B7F1 116 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 TRBV7-1A0A0A6YYK4 115 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 FAM223BA6NKX1 122 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 SIX6O95475 246 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 CRYGAP11844 174 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 KLK9Q2XQG4 91 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 SPANXN5Q5MJ07 72 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 C10orf99Q6UWK7 81 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 FAM223AQ8IWN6 122 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 C9orf62Q8N4C0 152 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 TTC9CQ8N5M4 171 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 C5orf56Q8N8D9 126 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 RAB37Q96AX2 223 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 RETNLBQ9BQ08 111 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 NPVFQ9HCQ7 196 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 RPRMQ9NS64 109 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 ANAPC11Q9NYG5 84 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 KLK9Q9UKQ9 250 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 LY96Q9Y6Y9 160 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 TRAV14DV4A0A0A6YYC5 116 aa2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 IGLC7A0M8Q6 106 aa2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 ZNF22P17026 224 aaPredicted RBP2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 ZNF90Q03938 601 aa2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 ESRGQ1W209 222 aa2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 HHLA3Q9XRX5 114 aa2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 HERC2O95714 4834 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 TRAV3A0A0B4J244 114 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 G3V3Q6 166 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 RNASE2P10153 161 aaKnown RBP2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 IAPPP10997 89 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 CKS2P33552 79 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 WT1-ASQ06250 92 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 SS18Q15532 418 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 ASB16-AS1Q495Z4 193 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 LINC00483Q53H64 154 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 Q56UQ5 140 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 Q5BKY6 102 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 MRPL54Q6P161 138 aaKnown RBP2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 SPINT4Q6UDR6 99 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 UNQ5815/PRO19632Q6UWF5 114 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 TRGV9Q99603 122 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 TXNDC17Q9BRA2 123 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 SCRT1Q9BWW7 348 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 AGPAT4-IT1Q9H0P7 198 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 PRO0461Q9UI25 63 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 STAB2Q8WWQ8 2551 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 PRKDCP78527 4128 aaKnown RBP2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 SORL1Q92673 2214 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 TRAV1-1A0A0B4J248 108 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 FAM24AA6NFZ4 105 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 G3V318 75 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 PSCAO43653 123 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 HYPMO75409 117 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 TRACP01848 142 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 PRH1P02810 166 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 CIRBPQ14011 172 aaKnown RBP2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 Q6ZQT0 140 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 Q6ZUT4 128 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 NDUFA11Q86Y39 141 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 SVBPQ8N300 66 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 OR4X2Q8NGF9 303 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 MYOZ3Q8TDC0 251 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 CLEC2BQ92478 149 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 FAM103A1Q9BTL3 118 aaKnown RBP2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 HIGD2AQ9BW72 106 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 SNHG12Q9BXW3 62 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 SEC11CQ9BY50 192 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 MED9Q9NWA0 146 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 ARL2-SNX15V9GYD0 113 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 RYR2Q92736 4967 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 DNAH3Q8TD57 4116 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 COL7A1Q02388 2944 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 IGHV3-64A0A075B6Q5 118 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 UBE2L5PA0A1B0GUS4 154 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 TCRBV4S1A1TA0A5B7 111 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 I3L2K1 104 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 M0R2P5 195 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 IFITM1P13164 125 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 C10orf55Q5SWW7 151 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 KPRPQ5T749 579 aaPredicted RBP2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 RPL7L1Q6DKI1 246 aaKnown RBP2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 CYP2G1PQ6ZSU1 146 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 LINC00167Q96N53 147 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 C14orf132Q9NPU4 83 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms