RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 C17orf112F2Z3M2 114 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 CCDC179H3BU77 68 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 GNRH2O43555 120 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SSSCA1O60232 199 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 DEFA4P12838 97 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 KRTAP10-8P60410 259 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SERF2P84101 59 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 HSD52Q0P140 79 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 FXYD3Q14802 87 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 CLLU1Q5K131 121 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 COL5A1-AS1Q5SY13 56 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SLC35E3Q7Z769 313 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 Q8NAQ8 132 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 SFT2D1Q8WV19 159 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 USMG5Q96IX5 58 aa2.59□□□□□ -1.99
PDLIM1P4-201ENST00000504327 IGHV3OR16-8A0A075B7F1 116 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 TRBV7-1A0A0A6YYK4 115 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 FAM223BA6NKX1 122 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 SIX6O95475 246 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 CRYGAP11844 174 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 KLK9Q2XQG4 91 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 SPANXN5Q5MJ07 72 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 C10orf99Q6UWK7 81 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 FAM223AQ8IWN6 122 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 C9orf62Q8N4C0 152 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 TTC9CQ8N5M4 171 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 C5orf56Q8N8D9 126 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 RAB37Q96AX2 223 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 RETNLBQ9BQ08 111 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 NPVFQ9HCQ7 196 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 RPRMQ9NS64 109 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 ANAPC11Q9NYG5 84 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 KLK9Q9UKQ9 250 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 LY96Q9Y6Y9 160 aa2.58□□□□□ -2
PDLIM1P4-201ENST00000504327 TRAV14DV4A0A0A6YYC5 116 aa2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 IGLC7A0M8Q6 106 aa2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 ZNF22P17026 224 aaPredicted RBP2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 ZNF90Q03938 601 aa2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 ESRGQ1W209 222 aa2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 HHLA3Q9XRX5 114 aa2.57□□□□□ -2
PDLIM1P4-201ENST00000504327 HERC2O95714 4834 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 TRAV3A0A0B4J244 114 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 G3V3Q6 166 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 RNASE2P10153 161 aaKnown RBP2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 IAPPP10997 89 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 CKS2P33552 79 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 WT1-ASQ06250 92 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 SS18Q15532 418 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 ASB16-AS1Q495Z4 193 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 LINC00483Q53H64 154 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 Q56UQ5 140 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 Q5BKY6 102 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 MRPL54Q6P161 138 aaKnown RBP2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 SPINT4Q6UDR6 99 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 UNQ5815/PRO19632Q6UWF5 114 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 TRGV9Q99603 122 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 TXNDC17Q9BRA2 123 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 SCRT1Q9BWW7 348 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 KRTAP4-3Q9BYR4 195 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 AGPAT4-IT1Q9H0P7 198 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 PRO0461Q9UI25 63 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 STAB2Q8WWQ8 2551 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 PRKDCP78527 4128 aaKnown RBP2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 SORL1Q92673 2214 aa2.56□□□□□ -2
PDLIM1P4-201ENST00000504327 TRAV1-1A0A0B4J248 108 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 FAM24AA6NFZ4 105 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 G3V318 75 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 PSCAO43653 123 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 HYPMO75409 117 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 TRACP01848 142 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 PRH1P02810 166 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 CIRBPQ14011 172 aaKnown RBP2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 Q6ZQT0 140 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 Q6ZUT4 128 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 NDUFA11Q86Y39 141 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 SVBPQ8N300 66 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 OR4X2Q8NGF9 303 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 MYOZ3Q8TDC0 251 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 CLEC2BQ92478 149 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 FAM103A1Q9BTL3 118 aaKnown RBP2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 HIGD2AQ9BW72 106 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 SNHG12Q9BXW3 62 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 SEC11CQ9BY50 192 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 MED9Q9NWA0 146 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 ARL2-SNX15V9GYD0 113 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 RYR2Q92736 4967 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 DNAH3Q8TD57 4116 aa2.55□□□□□ -2
PDLIM1P4-201ENST00000504327 COL7A1Q02388 2944 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 IGHV3-64A0A075B6Q5 118 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 UBE2L5PA0A1B0GUS4 154 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 TCRBV4S1A1TA0A5B7 111 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 I3L2K1 104 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 M0R2P5 195 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 IFITM1P13164 125 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 C10orf55Q5SWW7 151 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 KPRPQ5T749 579 aaPredicted RBP2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 RPL7L1Q6DKI1 246 aaKnown RBP2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 CYP2G1PQ6ZSU1 146 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 LINC00167Q96N53 147 aa2.54□□□□□ -2
PDLIM1P4-201ENST00000504327 C14orf132Q9NPU4 83 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms