RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 SCGB3A1Q96QR1 104 aa7.33□□□□□ -1.24
MED28-203ENST00000503945 ALKBH7Q9BT30 221 aaPredicted RBP7.33□□□□□ -1.24
MED28-203ENST00000503945 IGLV7-43P04211 117 aa7.32□□□□□ -1.24
MED28-203ENST00000503945 ERASQ7Z444 233 aa7.32□□□□□ -1.24
MED28-203ENST00000503945 DIRC1Q969H9 104 aa7.32□□□□□ -1.24
MED28-203ENST00000503945 TIMM17AQ99595 171 aa7.32□□□□□ -1.24
MED28-203ENST00000503945 SEC11CQ9BY50 192 aa7.32□□□□□ -1.24
MED28-203ENST00000503945 GNB1LQ9BYB4 327 aa7.32□□□□□ -1.24
MED28-203ENST00000503945 LINC01549A6NIU2 74 aa7.31□□□□□ -1.24
MED28-203ENST00000503945 UBE2BP63146 152 aa7.31□□□□□ -1.24
MED28-203ENST00000503945 COX19Q49B96 90 aa7.31□□□□□ -1.24
MED28-203ENST00000503945 Q8IZM0 81 aa7.31□□□□□ -1.24
MED28-203ENST00000503945 CDKN2A-AS1Q9UH64 79 aa7.31□□□□□ -1.24
MED28-203ENST00000503945 ADCYAP1P18509 176 aa7.3□□□□□ -1.24
MED28-203ENST00000503945 M0QXV9 152 aa7.29□□□□□ -1.24
MED28-203ENST00000503945 IFITM2Q01629 132 aa7.29□□□□□ -1.24
MED28-203ENST00000503945 C9orf129Q5T035 196 aaKnown RBP7.29□□□□□ -1.24
MED28-203ENST00000503945 F8VRH5 84 aa7.28□□□□□ -1.24
MED28-203ENST00000503945 FABP9Q0Z7S8 132 aa7.28□□□□□ -1.24
MED28-203ENST00000503945 LBHQ53QV2 105 aaPredicted RBP7.28□□□□□ -1.24
MED28-203ENST00000503945 KRTAP7-1Q8IUC3 87 aa7.28□□□□□ -1.24
MED28-203ENST00000503945 TINCRA0A1B0GVN0 87 aa7.27□□□□□ -1.25
MED28-203ENST00000503945 PDZD11Q5EBL8 140 aa7.27□□□□□ -1.25
MED28-203ENST00000503945 FA2HQ7L5A8 372 aa7.27□□□□□ -1.25
MED28-203ENST00000503945 KRTAP11-1Q8IUC1 163 aa7.27□□□□□ -1.25
MED28-203ENST00000503945 LINC00469Q8N7U9 141 aa7.27□□□□□ -1.25
MED28-203ENST00000503945 CST9LQ9H4G1 147 aa7.27□□□□□ -1.25
MED28-203ENST00000503945 RPS10P5Q9NQ39 176 aa7.27□□□□□ -1.25
MED28-203ENST00000503945 SMCO4Q9NRQ5 59 aa7.27□□□□□ -1.25
MED28-203ENST00000503945 LINC01546A6NGU7 62 aa7.26□□□□□ -1.25
MED28-203ENST00000503945 H0Y9J4 135 aa7.26□□□□□ -1.25
MED28-203ENST00000503945 CXCL5P42830 114 aa7.26□□□□□ -1.25
MED28-203ENST00000503945 COMMD7Q86VX2 200 aa7.26□□□□□ -1.25
MED28-203ENST00000503945 MRPL18Q9H0U6 180 aaKnown RBP7.26□□□□□ -1.25
MED28-203ENST00000503945 XAGE1AQ9HD64 81 aa7.26□□□□□ -1.25
MED28-203ENST00000503945 C22orf24Q9Y442 160 aa7.26□□□□□ -1.25
MED28-203ENST00000503945 PMVKQ15126 192 aa7.25□□□□□ -1.25
MED28-203ENST00000503945 LPAP08519 4548 aa7.24□□□□□ -1.25
MED28-203ENST00000503945 RHEBQ15382 184 aa7.24□□□□□ -1.25
MED28-203ENST00000503945 C10orf91Q5T1B1 145 aa7.24□□□□□ -1.25
MED28-203ENST00000503945 PRR26Q8N8Z3 221 aa7.24□□□□□ -1.25
MED28-203ENST00000503945 COX7B2Q8TF08 81 aa7.24□□□□□ -1.25
MED28-203ENST00000503945 SMIM1B2RUZ4 78 aa7.23□□□□□ -1.25
MED28-203ENST00000503945 H3BRM9 83 aa7.23□□□□□ -1.25
MED28-203ENST00000503945 NDUFA6P56556 154 aa7.23□□□□□ -1.25
MED28-203ENST00000503945 RAB5BP61020 215 aa7.23□□□□□ -1.25
MED28-203ENST00000503945 TRAPPC1Q9Y5R8 145 aa7.23□□□□□ -1.25
MED28-203ENST00000503945 IGLV1-50A0A075B6I6 118 aa7.22□□□□□ -1.25
MED28-203ENST00000503945 IGLV5-45A0A087WSX0 123 aa7.22□□□□□ -1.25
MED28-203ENST00000503945 NUPR1O60356 82 aa7.22□□□□□ -1.25
MED28-203ENST00000503945 ZNF861PO60384 105 aa7.22□□□□□ -1.25
MED28-203ENST00000503945 LINC00614P0C842 121 aa7.22□□□□□ -1.25
MED28-203ENST00000503945 SPINK8P0C7L1 97 aa7.21□□□□□ -1.26
MED28-203ENST00000503945 MRPL55Q7Z7F7 128 aaKnown RBP7.21□□□□□ -1.26
MED28-203ENST00000503945 TP73-AS1Q9UF72 201 aa7.21□□□□□ -1.26
MED28-203ENST00000503945 CARHSP1Q9Y2V2 147 aaKnown RBP7.21□□□□□ -1.26
MED28-203ENST00000503945 ATP5LO75964 103 aa7.2□□□□□ -1.26
MED28-203ENST00000503945 RPL13AP40429 203 aaKnown RBP7.19□□□□□ -1.26
MED28-203ENST00000503945 RPL37AP8A6NKH3 93 aa7.18□□□□□ -1.26
MED28-203ENST00000503945 APOC3P02656 99 aa7.18□□□□□ -1.26
MED28-203ENST00000503945 RPL28P46779 137 aaKnown RBP7.18□□□□□ -1.26
MED28-203ENST00000503945 LINC00167Q96N53 147 aa7.18□□□□□ -1.26
MED28-203ENST00000503945 BCE1O60756 84 aa7.17□□□□□ -1.26
MED28-203ENST00000503945 SNAPINO95295 136 aa7.17□□□□□ -1.26
MED28-203ENST00000503945 KRTAP1-4P0C5Y4 121 aa7.17□□□□□ -1.26
MED28-203ENST00000503945 IGLC3P0DOY3 106 aa7.17□□□□□ -1.26
MED28-203ENST00000503945 NDUFA5Q16718 116 aa7.17□□□□□ -1.26
MED28-203ENST00000503945 NKAPP1Q8N9T2 125 aa7.17□□□□□ -1.26
MED28-203ENST00000503945 C18orf32Q8TCD1 76 aa7.17□□□□□ -1.26
MED28-203ENST00000503945 HBDP02042 147 aa7.16□□□□□ -1.26
MED28-203ENST00000503945 PFN2P35080 140 aa7.16□□□□□ -1.26
MED28-203ENST00000503945 LCE2CQ5TA81 110 aa7.16□□□□□ -1.26
MED28-203ENST00000503945 BAGE3Q86Y29 109 aa7.16□□□□□ -1.26
MED28-203ENST00000503945 SVBPQ8N300 66 aa7.16□□□□□ -1.26
MED28-203ENST00000503945 GAGE10A6NGK3 116 aa7.15□□□□□ -1.26
MED28-203ENST00000503945 A6NJY4 79 aa7.15□□□□□ -1.26
MED28-203ENST00000503945 PMCHL1Q16048 86 aa7.15□□□□□ -1.26
MED28-203ENST00000503945 A0A096LNJ9 63 aa7.14□□□□□ -1.27
MED28-203ENST00000503945 IGLV5-39A0A0G2JS06 123 aa7.14□□□□□ -1.27
MED28-203ENST00000503945 COX17Q14061 63 aa7.14□□□□□ -1.27
MED28-203ENST00000503945 URB1-AS1Q96HZ7 61 aa7.14□□□□□ -1.27
MED28-203ENST00000503945 IGLV5-37A0A075B6J1 123 aa7.13□□□□□ -1.27
MED28-203ENST00000503945 ZNF22P17026 224 aaPredicted RBP7.13□□□□□ -1.27
MED28-203ENST00000503945 RPL24P83731 157 aaKnown RBP7.13□□□□□ -1.27
MED28-203ENST00000503945 TMEM170BQ5T4T1 132 aa7.13□□□□□ -1.27
MED28-203ENST00000503945 CRYGAP11844 174 aa7.12□□□□□ -1.27
MED28-203ENST00000503945 UBE2AP49459 152 aa7.12□□□□□ -1.27
MED28-203ENST00000503945 SFTA2Q6UW10 78 aa7.12□□□□□ -1.27
MED28-203ENST00000503945 ERG28Q9UKR5 140 aa7.12□□□□□ -1.27
MED28-203ENST00000503945 ZNF625Q96I27 306 aaPredicted RBP7.11□□□□□ -1.27
MED28-203ENST00000503945 SND1-IT1Q9HBX3 110 aa7.11□□□□□ -1.27
MED28-203ENST00000503945 CHTOPQ9Y3Y2 248 aaKnown RBP7.11□□□□□ -1.27
MED28-203ENST00000503945 C11orf86A6NJI1 115 aa7.1□□□□□ -1.27
MED28-203ENST00000503945 PRR4Q16378 134 aa7.1□□□□□ -1.27
MED28-203ENST00000503945 CHCHD1Q96BP2 118 aaKnown RBP7.1□□□□□ -1.27
MED28-203ENST00000503945 IGKV2-28A0A075B6P5 120 aa7.09□□□□□ -1.27
MED28-203ENST00000503945 IGKV2D-28P01615 120 aa7.09□□□□□ -1.27
MED28-203ENST00000503945 LINC00158P58513 81 aa7.09□□□□□ -1.27
MED28-203ENST00000503945 TYMSOSQ8TAI1 123 aa7.09□□□□□ -1.27
MED28-203ENST00000503945 MUC2Q02817 5179 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms