RNA–Protein interactions for RNA: ENST00000503659.5

RNF4-204, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-204ENST00000503659 FABP9Q0Z7S8 132 aa11.23□□□□□ -0.61
RNF4-204ENST00000503659 FAM19A5Q7Z5A7 132 aaPredicted RBP11.23□□□□□ -0.61
RNF4-204ENST00000503659 KRTAP11-1Q8IUC1 163 aa11.23□□□□□ -0.61
RNF4-204ENST00000503659 PACRGQ96M98 296 aaPredicted RBP11.23□□□□□ -0.61
RNF4-204ENST00000503659 GEMIN7Q9H840 131 aaKnown RBP11.23□□□□□ -0.61
RNF4-204ENST00000503659 TOMM7Q9P0U1 55 aa11.23□□□□□ -0.61
RNF4-204ENST00000503659 UBR4Q5T4S7 5183 aa11.22□□□□□ -0.61
RNF4-204ENST00000503659 PRSS2P07478 247 aa11.22□□□□□ -0.61
RNF4-204ENST00000503659 C9orf129Q5T035 196 aaKnown RBP11.22□□□□□ -0.61
RNF4-204ENST00000503659 IGLV5-45A0A087WSX0 123 aa11.2□□□□□ -0.62
RNF4-204ENST00000503659 LINC01549A6NIU2 74 aa11.2□□□□□ -0.62
RNF4-204ENST00000503659 CKS1BP61024 79 aa11.2□□□□□ -0.62
RNF4-204ENST00000503659 C6orf226Q5I0X4 101 aa11.2□□□□□ -0.62
RNF4-204ENST00000503659 FA2HQ7L5A8 372 aa11.2□□□□□ -0.62
RNF4-204ENST00000503659 TINCRA0A1B0GVN0 87 aa11.19□□□□□ -0.62
RNF4-204ENST00000503659 SMIM1B2RUZ4 78 aa11.19□□□□□ -0.62
RNF4-204ENST00000503659 C1orf137Q5JT78 98 aa11.19□□□□□ -0.62
RNF4-204ENST00000503659 LINC00469Q8N7U9 141 aa11.19□□□□□ -0.62
RNF4-204ENST00000503659 CST9LQ9H4G1 147 aa11.19□□□□□ -0.62
RNF4-204ENST00000503659 SMCO4Q9NRQ5 59 aa11.19□□□□□ -0.62
RNF4-204ENST00000503659 APOC3P02656 99 aa11.18□□□□□ -0.62
RNF4-204ENST00000503659 URB1-AS1Q96HZ7 61 aa11.18□□□□□ -0.62
RNF4-204ENST00000503659 A0A096LNJ9 63 aa11.17□□□□□ -0.62
RNF4-204ENST00000503659 M0QXV9 152 aa11.17□□□□□ -0.62
RNF4-204ENST00000503659 KRTAP10-8P60410 259 aa11.17□□□□□ -0.62
RNF4-204ENST00000503659 C18orf32Q8TCD1 76 aa11.17□□□□□ -0.62
RNF4-204ENST00000503659 F8VRH5 84 aa11.16□□□□□ -0.62
RNF4-204ENST00000503659 ODF1Q14990 250 aa11.16□□□□□ -0.62
RNF4-204ENST00000503659 TRAPPC1Q9Y5R8 145 aa11.16□□□□□ -0.62
RNF4-204ENST00000503659 IGLV7-43P04211 117 aa11.15□□□□□ -0.62
RNF4-204ENST00000503659 PMVKQ15126 192 aa11.15□□□□□ -0.62
RNF4-204ENST00000503659 PDZD11Q5EBL8 140 aa11.15□□□□□ -0.62
RNF4-204ENST00000503659 CXCL5P42830 114 aa11.14□□□□□ -0.63
RNF4-204ENST00000503659 SVBPQ8N300 66 aa11.14□□□□□ -0.63
RNF4-204ENST00000503659 SNAPINO95295 136 aa11.13□□□□□ -0.63
RNF4-204ENST00000503659 COX7B2Q8TF08 81 aa11.13□□□□□ -0.63
RNF4-204ENST00000503659 XAGE1AQ9HD64 81 aa11.13□□□□□ -0.63
RNF4-204ENST00000503659 SPINK8P0C7L1 97 aa11.12□□□□□ -0.63
RNF4-204ENST00000503659 LINC00614P0C842 121 aa11.12□□□□□ -0.63
RNF4-204ENST00000503659 NDUFA5Q16718 116 aa11.12□□□□□ -0.63
RNF4-204ENST00000503659 YPEL4Q96NS1 127 aa11.12□□□□□ -0.63
RNF4-204ENST00000503659 UBE2BP63146 152 aa11.11□□□□□ -0.63
RNF4-204ENST00000503659 HBDP02042 147 aa11.1□□□□□ -0.63
RNF4-204ENST00000503659 IGLC3P0DOY3 106 aa11.1□□□□□ -0.63
RNF4-204ENST00000503659 PMCHL1Q16048 86 aa11.1□□□□□ -0.63
RNF4-204ENST00000503659 LRP2P98164 4655 aa11.08□□□□□ -0.64
RNF4-204ENST00000503659 DIRC1Q969H9 104 aa11.08□□□□□ -0.64
RNF4-204ENST00000503659 C22orf24Q9Y442 160 aa11.08□□□□□ -0.64
RNF4-204ENST00000503659 H0Y9J4 135 aa11.07□□□□□ -0.64
RNF4-204ENST00000503659 H3BRM9 83 aa11.06□□□□□ -0.64
RNF4-204ENST00000503659 ZNF22P17026 224 aaPredicted RBP11.06□□□□□ -0.64
RNF4-204ENST00000503659 NDUFA6P56556 154 aa11.06□□□□□ -0.64
RNF4-204ENST00000503659 IGLV5-39A0A0G2JS06 123 aa11.05□□□□□ -0.64
RNF4-204ENST00000503659 RAB5BP61020 215 aa11.04□□□□□ -0.64
RNF4-204ENST00000503659 TP73-AS1Q9UF72 201 aa11.04□□□□□ -0.64
RNF4-204ENST00000503659 ATP5LO75964 103 aa11.03□□□□□ -0.64
RNF4-204ENST00000503659 C11orf86A6NJI1 115 aa11.02□□□□□ -0.65
RNF4-204ENST00000503659 KRTAP1-4P0C5Y4 121 aa11.02□□□□□ -0.65
RNF4-204ENST00000503659 LBHQ53QV2 105 aaPredicted RBP11.02□□□□□ -0.65
RNF4-204ENST00000503659 MRPL55Q7Z7F7 128 aaKnown RBP11.02□□□□□ -0.65
RNF4-204ENST00000503659 BAGE3Q86Y29 109 aa11.01□□□□□ -0.65
RNF4-204ENST00000503659 CBLN2Q8IUK8 224 aa11.01□□□□□ -0.65
RNF4-204ENST00000503659 PRR26Q8N8Z3 221 aa11.01□□□□□ -0.65
RNF4-204ENST00000503659 NUPR1O60356 82 aa11□□□□□ -0.65
RNF4-204ENST00000503659 CHCHD1Q96BP2 118 aaKnown RBP10.99□□□□□ -0.65
RNF4-204ENST00000503659 IGLV5-37A0A075B6J1 123 aa10.98□□□□□ -0.65
RNF4-204ENST00000503659 ZNF861PO60384 105 aa10.98□□□□□ -0.65
RNF4-204ENST00000503659 LINC00167Q96N53 147 aa10.98□□□□□ -0.65
RNF4-204ENST00000503659 TMEM170BQ5T4T1 132 aa10.97□□□□□ -0.65
RNF4-204ENST00000503659 RPL37AP8A6NKH3 93 aa10.96□□□□□ -0.65
RNF4-204ENST00000503659 PFN2P35080 140 aa10.96□□□□□ -0.65
RNF4-204ENST00000503659 ERG28Q9UKR5 140 aa10.96□□□□□ -0.65
RNF4-204ENST00000503659 CHTOPQ9Y3Y2 248 aaKnown RBP10.96□□□□□ -0.65
RNF4-204ENST00000503659 GAGE10A6NGK3 116 aa10.95□□□□□ -0.66
RNF4-204ENST00000503659 IFI27L1Q96BM0 104 aa10.95□□□□□ -0.66
RNF4-204ENST00000503659 IGLV1-50A0A075B6I6 118 aa10.94□□□□□ -0.66
RNF4-204ENST00000503659 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
RNF4-204ENST00000503659 BCE1O60756 84 aa10.94□□□□□ -0.66
RNF4-204ENST00000503659 ZNF625Q96I27 306 aaPredicted RBP10.94□□□□□ -0.66
RNF4-204ENST00000503659 SCO1O75880 301 aa10.93□□□□□ -0.66
RNF4-204ENST00000503659 SND1-IT1Q9HBX3 110 aa10.93□□□□□ -0.66
RNF4-204ENST00000503659 TMEM223A0PJW6 202 aa10.92□□□□□ -0.66
RNF4-204ENST00000503659 COX17Q14061 63 aa10.92□□□□□ -0.66
RNF4-204ENST00000503659 SLC7A5P1Q8MH63 180 aa10.92□□□□□ -0.66
RNF4-204ENST00000503659 FAM19A2Q8N3H0 131 aa10.92□□□□□ -0.66
RNF4-204ENST00000503659 NKAPP1Q8N9T2 125 aa10.92□□□□□ -0.66
RNF4-204ENST00000503659 TRGC2P03986 189 aa10.91□□□□□ -0.66
RNF4-204ENST00000503659 VPREB1P12018 145 aa10.91□□□□□ -0.66
RNF4-204ENST00000503659 HSBP1O75506 76 aa10.9□□□□□ -0.66
RNF4-204ENST00000503659 RPL28P46779 137 aaKnown RBP10.9□□□□□ -0.66
RNF4-204ENST00000503659 LINC00310P59036 64 aa10.9□□□□□ -0.66
RNF4-204ENST00000503659 SFTA2Q6UW10 78 aa10.9□□□□□ -0.66
RNF4-204ENST00000503659 Q8NDZ9 215 aa10.9□□□□□ -0.66
RNF4-204ENST00000503659 KRTAP13-1Q8IUC0 172 aa10.89□□□□□ -0.67
RNF4-204ENST00000503659 IGKV2-28A0A075B6P5 120 aa10.88□□□□□ -0.67
RNF4-204ENST00000503659 IGKV2D-28P01615 120 aa10.88□□□□□ -0.67
RNF4-204ENST00000503659 RPL13AP40429 203 aaKnown RBP10.88□□□□□ -0.67
RNF4-204ENST00000503659 RNF213Q63HN8 5207 aa10.86□□□□□ -0.67
RNF4-204ENST00000503659 SERF1AO75920 110 aa10.86□□□□□ -0.67
RNF4-204ENST00000503659 LPAP08519 4548 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms