RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 CCDC168Q8NDH2 2452 aa17.04■□□□□ 0.32
DDX41-202ENST00000503078 HIST1H4AP62805 103 aaKnown RBP17.03■□□□□ 0.32
DDX41-202ENST00000503078 CUBNO60494 3623 aa17.03■□□□□ 0.32
DDX41-202ENST00000503078 FLNAP21333 2647 aaKnown RBP17.03■□□□□ 0.32
DDX41-202ENST00000503078 SONP18583 2426 aaKnown RBP17.03■□□□□ 0.32
DDX41-202ENST00000503078 JMJD1CQ15652 2540 aa17.02■□□□□ 0.32
DDX41-202ENST00000503078 LINC01006Q8NI28 216 aa17.02■□□□□ 0.31
DDX41-202ENST00000503078 NCR3O14931 201 aa17■□□□□ 0.31
DDX41-202ENST00000503078 SLPIP03973 132 aa17■□□□□ 0.31
DDX41-202ENST00000503078 COX7CP15954 63 aa17■□□□□ 0.31
DDX41-202ENST00000503078 XCL1P47992 114 aa17■□□□□ 0.31
DDX41-202ENST00000503078 LINC00846Q9NV44 126 aa17■□□□□ 0.31
DDX41-202ENST00000503078 PDZD2O15018 2839 aa17■□□□□ 0.31
DDX41-202ENST00000503078 SS18Q15532 418 aa17■□□□□ 0.31
DDX41-202ENST00000503078 KMT2BQ9UMN6 2715 aaPredicted RBP16.99■□□□□ 0.31
DDX41-202ENST00000503078 DEFB130BP0DP73 79 aa16.99■□□□□ 0.31
DDX41-202ENST00000503078 DEFB130AP0DP74 79 aa16.99■□□□□ 0.31
DDX41-202ENST00000503078 Q6JHZ5 121 aa16.99■□□□□ 0.31
DDX41-202ENST00000503078 Q8IZM0 81 aa16.99■□□□□ 0.31
DDX41-202ENST00000503078 ATOX1O00244 68 aa16.99■□□□□ 0.31
DDX41-202ENST00000503078 ORMDL1Q9P0S3 153 aa16.99■□□□□ 0.31
DDX41-202ENST00000503078 A0A1B0GUV1 79 aa16.97■□□□□ 0.31
DDX41-202ENST00000503078 C2orf48Q96LS8 159 aa16.97■□□□□ 0.31
DDX41-202ENST00000503078 J3QKU1 62 aa16.96■□□□□ 0.31
DDX41-202ENST00000503078 GYPEP15421 78 aa16.96■□□□□ 0.31
DDX41-202ENST00000503078 KIR2DL5BQ8NHK3 375 aa16.96■□□□□ 0.31
DDX41-202ENST00000503078 C16orf95Q9H693 158 aa16.96■□□□□ 0.31
DDX41-202ENST00000503078 NF1P21359 2839 aa16.96■□□□□ 0.31
DDX41-202ENST00000503078 IGKV3D-7A0A0C4DH55 119 aa16.95■□□□□ 0.3
DDX41-202ENST00000503078 KRTAP1-1Q07627 177 aa16.95■□□□□ 0.3
DDX41-202ENST00000503078 LINC00612Q8N6U2 182 aa16.94■□□□□ 0.3
DDX41-202ENST00000503078 LINC01561Q8N1V8 128 aa16.93■□□□□ 0.3
DDX41-202ENST00000503078 RPL18AQ02543 176 aaKnown RBP16.93■□□□□ 0.3
DDX41-202ENST00000503078 LINC00167Q96N53 147 aa16.93■□□□□ 0.3
DDX41-202ENST00000503078 NIPBLQ6KC79 2804 aaeCLIP16.93■□□□□ 0.3
DDX41-202ENST00000503078 HELZ2Q9BYK8 2649 aaKnown RBP16.93■□□□□ 0.3
DDX41-202ENST00000503078 CLPSL2Q6UWE3 100 aa16.92■□□□□ 0.3
DDX41-202ENST00000503078 ITPR2Q14571 2701 aa16.91■□□□□ 0.3
DDX41-202ENST00000503078 A0A1B0GX51 115 aa16.91■□□□□ 0.3
DDX41-202ENST00000503078 RNASE1P07998 156 aaKnown RBP16.91■□□□□ 0.3
DDX41-202ENST00000503078 CRYGAP11844 174 aa16.91■□□□□ 0.3
DDX41-202ENST00000503078 NANOS2P60321 138 aaKnown RBP16.91■□□□□ 0.3
DDX41-202ENST00000503078 CCKP06307 115 aa16.89■□□□□ 0.3
DDX41-202ENST00000503078 PRR3P79522 188 aaKnown RBP16.88■□□□□ 0.29
DDX41-202ENST00000503078 Q8N814 137 aa16.87■□□□□ 0.29
DDX41-202ENST00000503078 ACANP16112 2415 aa16.87■□□□□ 0.29
DDX41-202ENST00000503078 NDUFC2O95298 119 aa16.87■□□□□ 0.29
DDX41-202ENST00000503078 PRO0255Q9UI72 69 aa16.86■□□□□ 0.29
DDX41-202ENST00000503078 JMJD7-PLA2G4BH0Y9G9 81 aa16.86■□□□□ 0.29
DDX41-202ENST00000503078 SETD2Q9BYW2 2564 aaPredicted RBP16.85■□□□□ 0.29
DDX41-202ENST00000503078 A0A087WVE0 104 aa16.85■□□□□ 0.29
DDX41-202ENST00000503078 COX17Q14061 63 aa16.85■□□□□ 0.29
DDX41-202ENST00000503078 KIAA0087Q14695 138 aa16.85■□□□□ 0.29
DDX41-202ENST00000503078 A0A096LPF7 62 aa16.85■□□□□ 0.29
DDX41-202ENST00000503078 UNC79Q9P2D8 2635 aa16.84■□□□□ 0.29
DDX41-202ENST00000503078 TMEM256-PLSCR3K7ERE1 68 aa16.83■□□□□ 0.28
DDX41-202ENST00000503078 CFAP161Q6P656 301 aa16.83■□□□□ 0.28
DDX41-202ENST00000503078 CD164L2Q6UWJ8 174 aa16.83■□□□□ 0.28
DDX41-202ENST00000503078 LINC00269Q8N2A0 174 aa16.82■□□□□ 0.28
DDX41-202ENST00000503078 X6R8D5 127 aa16.81■□□□□ 0.28
DDX41-202ENST00000503078 hADV29S1A0JD25 119 aa16.81■□□□□ 0.28
DDX41-202ENST00000503078 S100A7L2Q5SY68 101 aa16.8■□□□□ 0.28
DDX41-202ENST00000503078 SERP2Q8N6R1 65 aa16.8■□□□□ 0.28
DDX41-202ENST00000503078 USP17L23D6RBM5 183 aa16.79■□□□□ 0.28
DDX41-202ENST00000503078 CHCHD10Q8WYQ3 142 aaPredicted RBP16.79■□□□□ 0.28
DDX41-202ENST00000503078 IGHV4-28A0A0C4DH34 117 aa16.79■□□□□ 0.28
DDX41-202ENST00000503078 SMIM9A6NGZ8 99 aa16.78■□□□□ 0.28
DDX41-202ENST00000503078 MTORP42345 2549 aa16.77■□□□□ 0.28
DDX41-202ENST00000503078 C9orf116Q5BN46 136 aaPredicted RBP16.76■□□□□ 0.27
DDX41-202ENST00000503078 IGLV10-54A0A075B6I4 117 aa16.75■□□□□ 0.27
DDX41-202ENST00000503078 ANGP03950 147 aaKnown RBP16.74■□□□□ 0.27
DDX41-202ENST00000503078 REG3AQ06141 175 aa16.74■□□□□ 0.27
DDX41-202ENST00000503078 C6orf99Q4VX62 202 aa16.74■□□□□ 0.27
DDX41-202ENST00000503078 ATP5EP2Q5VTU8 51 aa16.74■□□□□ 0.27
DDX41-202ENST00000503078 CYSTM1Q9H1C7 97 aa16.74■□□□□ 0.27
DDX41-202ENST00000503078 Q8NDZ9 215 aa16.73■□□□□ 0.27
DDX41-202ENST00000503078 UPK3BQ9BT76 320 aa16.73■□□□□ 0.27
DDX41-202ENST00000503078 FN1P02751 2386 aaKnown RBP16.72■□□□□ 0.27
DDX41-202ENST00000503078 Q8N3U1 123 aa16.72■□□□□ 0.27
DDX41-202ENST00000503078 LYRM9A8MSI8 78 aa16.72■□□□□ 0.27
DDX41-202ENST00000503078 J3KT08 172 aa16.72■□□□□ 0.27
DDX41-202ENST00000503078 ANK3Q12955 4377 aaKnown RBP16.71■□□□□ 0.27
DDX41-202ENST00000503078 LOC107984640A0A0U1RRK4 108 aa16.71■□□□□ 0.26
DDX41-202ENST00000503078 HILS1P60008 231 aa16.7■□□□□ 0.26
DDX41-202ENST00000503078 LYPD5Q6UWN5 251 aa16.7■□□□□ 0.26
DDX41-202ENST00000503078 LINC00575Q6W349 94 aa16.7■□□□□ 0.26
DDX41-202ENST00000503078 FASNP49327 2511 aaKnown RBP16.7■□□□□ 0.26
DDX41-202ENST00000503078 LINC00482Q8N8I6 264 aa16.68■□□□□ 0.26
DDX41-202ENST00000503078 GCN1Q92616 2671 aaKnown RBP16.67■□□□□ 0.26
DDX41-202ENST00000503078 TMEM258P61165 79 aa16.66■□□□□ 0.26
DDX41-202ENST00000503078 WFDC9Q8NEX5 89 aa16.66■□□□□ 0.26
DDX41-202ENST00000503078 SMR3AQ99954 134 aa16.66■□□□□ 0.26
DDX41-202ENST00000503078 UBL5Q9BZL1 73 aa16.66■□□□□ 0.26
DDX41-202ENST00000503078 KRTAP10-3P60369 221 aa16.65■□□□□ 0.26
DDX41-202ENST00000503078 RPS28P62857 69 aaKnown RBP16.65■□□□□ 0.26
DDX41-202ENST00000503078 DEFB4AO15263 64 aa16.64■□□□□ 0.25
DDX41-202ENST00000503078 ENHOQ6UWT2 76 aa16.64■□□□□ 0.25
DDX41-202ENST00000503078 MUC7Q8TAX7 377 aa16.64■□□□□ 0.25
DDX41-202ENST00000503078 TRBV10-3A0A0K0K1G6 114 aa16.63■□□□□ 0.25
DDX41-202ENST00000503078 C10orf25Q5T742 122 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 153.6 ms