RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 SND1-IT1Q9HBX3 110 aa5.23□□□□□ -1.57
PDGFC-203ENST00000502773 CD164Q04900 197 aa5.23□□□□□ -1.57
PDGFC-203ENST00000502773 NTM-AS1Q6ZSK4 140 aa5.22□□□□□ -1.57
PDGFC-203ENST00000502773 A8MZ25 164 aa5.22□□□□□ -1.57
PDGFC-203ENST00000502773 LST1O00453 97 aa5.22□□□□□ -1.57
PDGFC-203ENST00000502773 GIG44P09565 113 aaPredicted RBP5.22□□□□□ -1.57
PDGFC-203ENST00000502773 PLAC8L1A1L4L8 177 aa5.21□□□□□ -1.57
PDGFC-203ENST00000502773 ANGP03950 147 aaKnown RBP5.21□□□□□ -1.57
PDGFC-203ENST00000502773 VPREB1P12018 145 aa5.21□□□□□ -1.57
PDGFC-203ENST00000502773 USP9YO00507 2555 aaPredicted RBP5.21□□□□□ -1.58
PDGFC-203ENST00000502773 DMXL1Q9Y485 3027 aa5.21□□□□□ -1.58
PDGFC-203ENST00000502773 RMI2Q96E14 147 aa5.21□□□□□ -1.58
PDGFC-203ENST00000502773 PTPN13Q12923 2485 aa5.21□□□□□ -1.58
PDGFC-203ENST00000502773 ZNF561-AS1K7EIQ3 104 aa5.21□□□□□ -1.58
PDGFC-203ENST00000502773 LECT2O14960 151 aa5.21□□□□□ -1.58
PDGFC-203ENST00000502773 DEFB135Q30KP9 77 aa5.21□□□□□ -1.58
PDGFC-203ENST00000502773 IGHV4-28A0A0C4DH34 117 aa5.2□□□□□ -1.58
PDGFC-203ENST00000502773 PRR4Q16378 134 aa5.2□□□□□ -1.58
PDGFC-203ENST00000502773 LITAFQ99732 161 aa5.2□□□□□ -1.58
PDGFC-203ENST00000502773 X6R8D5 127 aa5.2□□□□□ -1.58
PDGFC-203ENST00000502773 IGHV3OR16-9A0A0B4J2B5 98 aa5.2□□□□□ -1.58
PDGFC-203ENST00000502773 CHKB-CPT1BH3BT56 60 aa5.2□□□□□ -1.58
PDGFC-203ENST00000502773 RPL28P46779 137 aaKnown RBP5.2□□□□□ -1.58
PDGFC-203ENST00000502773 LINC00474Q9P2X8 69 aa5.2□□□□□ -1.58
PDGFC-203ENST00000502773 PRM2P04554 102 aa5.2□□□□□ -1.58
PDGFC-203ENST00000502773 MIR7-3HGQ8N6C7 128 aa5.2□□□□□ -1.58
PDGFC-203ENST00000502773 USP9XQ93008 2570 aaPredicted RBP5.2□□□□□ -1.58
PDGFC-203ENST00000502773 COX6A2Q02221 97 aa5.19□□□□□ -1.58
PDGFC-203ENST00000502773 REG3AQ06141 175 aa5.19□□□□□ -1.58
PDGFC-203ENST00000502773 ORMDL1Q9P0S3 153 aa5.19□□□□□ -1.58
PDGFC-203ENST00000502773 DCHS1Q96JQ0 3298 aa5.19□□□□□ -1.58
PDGFC-203ENST00000502773 NCR3O14931 201 aa5.19□□□□□ -1.58
PDGFC-203ENST00000502773 C5orf38Q86SI9 138 aa5.19□□□□□ -1.58
PDGFC-203ENST00000502773 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.19□□□□□ -1.58
PDGFC-203ENST00000502773 WFDC10AQ9H1F0 79 aa5.19□□□□□ -1.58
PDGFC-203ENST00000502773 LRRK2Q5S007 2527 aa5.18□□□□□ -1.58
PDGFC-203ENST00000502773 A6NED7 52 aa5.18□□□□□ -1.58
PDGFC-203ENST00000502773 H3BS24 57 aa5.18□□□□□ -1.58
PDGFC-203ENST00000502773 HTN3P15516 51 aa5.18□□□□□ -1.58
PDGFC-203ENST00000502773 ADAMTSL4-AS1Q5T5F5 129 aa5.18□□□□□ -1.58
PDGFC-203ENST00000502773 SERTAD4-AS1Q5TG53 156 aa5.18□□□□□ -1.58
PDGFC-203ENST00000502773 NDUFC1O43677 76 aa5.18□□□□□ -1.58
PDGFC-203ENST00000502773 SCXQ7RTU7 201 aa5.18□□□□□ -1.58
PDGFC-203ENST00000502773 ASPMQ8IZT6 3477 aa5.18□□□□□ -1.58
PDGFC-203ENST00000502773 ATP5EP56381 51 aaPredicted RBP5.18□□□□□ -1.58
PDGFC-203ENST00000502773 CHCHD10Q8WYQ3 142 aaPredicted RBP5.18□□□□□ -1.58
PDGFC-203ENST00000502773 JMJD7-PLA2G4BH0Y9G9 81 aa5.17□□□□□ -1.58
PDGFC-203ENST00000502773 IGHV4-30-4P0DP06 118 aa5.17□□□□□ -1.58
PDGFC-203ENST00000502773 Q6JHZ5 121 aa5.17□□□□□ -1.58
PDGFC-203ENST00000502773 DMXL2Q8TDJ6 3036 aa5.17□□□□□ -1.58
PDGFC-203ENST00000502773 BOD1L1Q8NFC6 3051 aa5.17□□□□□ -1.58
PDGFC-203ENST00000502773 LOC100131303A0A0U1RQF7 123 aa5.17□□□□□ -1.58
PDGFC-203ENST00000502773 CCKP06307 115 aa5.17□□□□□ -1.58
PDGFC-203ENST00000502773 NANOS2P60321 138 aaKnown RBP5.17□□□□□ -1.58
PDGFC-203ENST00000502773 FAM104AQ969W3 186 aa5.17□□□□□ -1.58
PDGFC-203ENST00000502773 SLPIP03973 132 aa5.16□□□□□ -1.58
PDGFC-203ENST00000502773 FAM19A1Q7Z5A9 133 aa5.16□□□□□ -1.58
PDGFC-203ENST00000502773 DMDP11532 3685 aa5.16□□□□□ -1.58
PDGFC-203ENST00000502773 PDE6GP18545 87 aa5.16□□□□□ -1.58
PDGFC-203ENST00000502773 LINC00269Q8N2A0 174 aa5.16□□□□□ -1.58
PDGFC-203ENST00000502773 LOC400499M0QZD8 3231 aa5.16□□□□□ -1.58
PDGFC-203ENST00000502773 IGLV4-60A0A075B6I1 120 aa5.15□□□□□ -1.58
PDGFC-203ENST00000502773 SMR3AQ99954 134 aa5.15□□□□□ -1.58
PDGFC-203ENST00000502773 IGSF10Q6WRI0 2623 aa5.15□□□□□ -1.58
PDGFC-203ENST00000502773 TMEM256-PLSCR3K7ERE1 68 aa5.15□□□□□ -1.58
PDGFC-203ENST00000502773 UBE2BP63146 152 aa5.15□□□□□ -1.58
PDGFC-203ENST00000502773 TRAV7A0A075B6U4 112 aa5.15□□□□□ -1.59
PDGFC-203ENST00000502773 SPAG11BQ08648 103 aa5.15□□□□□ -1.59
PDGFC-203ENST00000502773 Q5XG85 94 aa5.15□□□□□ -1.59
PDGFC-203ENST00000502773 ESRGQ1W209 222 aa5.15□□□□□ -1.59
PDGFC-203ENST00000502773 Q8NAQ8 132 aa5.15□□□□□ -1.59
PDGFC-203ENST00000502773 USP24Q9UPU5 2620 aa5.14□□□□□ -1.59
PDGFC-203ENST00000502773 DEFB121Q5J5C9 76 aa5.14□□□□□ -1.59
PDGFC-203ENST00000502773 ZFHX4Q86UP3 3567 aa5.14□□□□□ -1.59
PDGFC-203ENST00000502773 LINC00846Q9NV44 126 aa5.14□□□□□ -1.59
PDGFC-203ENST00000502773 Q9UF83 564 aa5.14□□□□□ -1.59
PDGFC-203ENST00000502773 HRNRQ86YZ3 2850 aaPredicted RBP5.14□□□□□ -1.59
PDGFC-203ENST00000502773 CCL18P55774 89 aa5.14□□□□□ -1.59
PDGFC-203ENST00000502773 MDFIQ99750 246 aa5.14□□□□□ -1.59
PDGFC-203ENST00000502773 KRTAP10-3P60369 221 aa5.13□□□□□ -1.59
PDGFC-203ENST00000502773 ATP5EP2Q5VTU8 51 aa5.13□□□□□ -1.59
PDGFC-203ENST00000502773 GVQW2A0A096LPI5 108 aaPredicted RBP5.13□□□□□ -1.59
PDGFC-203ENST00000502773 ADGRG4Q8IZF6 3080 aa5.13□□□□□ -1.59
PDGFC-203ENST00000502773 C11orf45Q8TAV5 145 aa5.12□□□□□ -1.59
PDGFC-203ENST00000502773 TRAV10A0A0B4J240 114 aa5.12□□□□□ -1.59
PDGFC-203ENST00000502773 TACC2O95359 2948 aa5.12□□□□□ -1.59
PDGFC-203ENST00000502773 SMCR5Q8TEV8 140 aa5.12□□□□□ -1.59
PDGFC-203ENST00000502773 EGFEM1PQ0D2K5 195 aa5.12□□□□□ -1.59
PDGFC-203ENST00000502773 KLK12Q9UKR0 248 aa5.12□□□□□ -1.59
PDGFC-203ENST00000502773 MYO9AB2RTY4 2548 aa5.12□□□□□ -1.59
PDGFC-203ENST00000502773 A0A096LPF7 62 aa5.11□□□□□ -1.59
PDGFC-203ENST00000502773 A0A0J9YWU9 116 aa5.11□□□□□ -1.59
PDGFC-203ENST00000502773 KPRPQ5T749 579 aaPredicted RBP5.11□□□□□ -1.59
PDGFC-203ENST00000502773 LYPD5Q6UWN5 251 aa5.11□□□□□ -1.59
PDGFC-203ENST00000502773 CAMK2N2Q96S95 79 aa5.11□□□□□ -1.59
PDGFC-203ENST00000502773 ATMQ13315 3056 aa5.11□□□□□ -1.59
PDGFC-203ENST00000502773 CFAP47Q6ZTR5 3102 aa5.1□□□□□ -1.59
PDGFC-203ENST00000502773 PRR34Q9NV39 138 aa5.1□□□□□ -1.59
PDGFC-203ENST00000502773 KALRNO60229 2985 aa5.1□□□□□ -1.59
PDGFC-203ENST00000502773 UBE2AP49459 152 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms