RNA–Protein interactions for RNA: ENST00000498187.6

NKX2-1-202, Transcript of NK2 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-1, Length 2,338 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-202ENST00000498187 IBA57-AS1B1ANH7 110 aa13.81□□□□□ -0.2
NKX2-1-202ENST00000498187 C3orf22Q8N5N4 141 aa13.81□□□□□ -0.2
NKX2-1-202ENST00000498187 TRBV6-8A0A0A6YYG3 113 aa13.81□□□□□ -0.2
NKX2-1-202ENST00000498187 UQCRQO14949 82 aa13.8□□□□□ -0.2
NKX2-1-202ENST00000498187 CCL18P55774 89 aa13.8□□□□□ -0.2
NKX2-1-202ENST00000498187 A0A087WYN8 130 aa13.8□□□□□ -0.2
NKX2-1-202ENST00000498187 IGHV3OR16-9A0A0B4J2B5 98 aa13.8□□□□□ -0.2
NKX2-1-202ENST00000498187 NIPBLQ6KC79 2804 aaeCLIP13.8□□□□□ -0.2
NKX2-1-202ENST00000498187 C9orf153Q5TBE3 101 aa13.79□□□□□ -0.2
NKX2-1-202ENST00000498187 A0A087WZ39 114 aa13.78□□□□□ -0.2
NKX2-1-202ENST00000498187 C3orf56Q8N813 242 aa13.77□□□□□ -0.21
NKX2-1-202ENST00000498187 LINC00526Q96FQ7 95 aa13.76□□□□□ -0.21
NKX2-1-202ENST00000498187 DEFB130BP0DP73 79 aa13.75□□□□□ -0.21
NKX2-1-202ENST00000498187 DEFB130AP0DP74 79 aa13.75□□□□□ -0.21
NKX2-1-202ENST00000498187 PFN2P35080 140 aa13.75□□□□□ -0.21
NKX2-1-202ENST00000498187 OBSCN-AS1Q96MR7 158 aa13.75□□□□□ -0.21
NKX2-1-202ENST00000498187 OTOGQ6ZRI0 2925 aa13.74□□□□□ -0.21
NKX2-1-202ENST00000498187 PAX4O43316 350 aa13.74□□□□□ -0.21
NKX2-1-202ENST00000498187 C14orf132Q9NPU4 83 aa13.74□□□□□ -0.21
NKX2-1-202ENST00000498187 LECT2O14960 151 aa13.73□□□□□ -0.21
NKX2-1-202ENST00000498187 OR13C6PQ8NH95 151 aa13.73□□□□□ -0.21
NKX2-1-202ENST00000498187 KLK5Q9Y337 293 aaPredicted RBP13.73□□□□□ -0.21
NKX2-1-202ENST00000498187 MTORP42345 2549 aa13.72□□□□□ -0.21
NKX2-1-202ENST00000498187 ATOX1O00244 68 aa13.72□□□□□ -0.21
NKX2-1-202ENST00000498187 COX7CP15954 63 aa13.72□□□□□ -0.21
NKX2-1-202ENST00000498187 HIST1H4AP62805 103 aaKnown RBP13.72□□□□□ -0.21
NKX2-1-202ENST00000498187 HILS1P60008 231 aa13.71□□□□□ -0.21
NKX2-1-202ENST00000498187 C6orf226Q5I0X4 101 aa13.71□□□□□ -0.21
NKX2-1-202ENST00000498187 C9orf129Q5T035 196 aaKnown RBP13.71□□□□□ -0.21
NKX2-1-202ENST00000498187 ANK3Q12955 4377 aaKnown RBP13.71□□□□□ -0.21
NKX2-1-202ENST00000498187 LINC00959A0A1B0GUT2 108 aa13.7□□□□□ -0.22
NKX2-1-202ENST00000498187 KIR2DL5BQ8NHK3 375 aa13.69□□□□□ -0.22
NKX2-1-202ENST00000498187 LY6G6DO95868 133 aa13.68□□□□□ -0.22
NKX2-1-202ENST00000498187 GYPEP15421 78 aa13.68□□□□□ -0.22
NKX2-1-202ENST00000498187 Q6JHZ5 121 aa13.68□□□□□ -0.22
NKX2-1-202ENST00000498187 LINC00612Q8N6U2 182 aa13.67□□□□□ -0.22
NKX2-1-202ENST00000498187 LINC00846Q9NV44 126 aa13.67□□□□□ -0.22
NKX2-1-202ENST00000498187 ORMDL1Q9P0S3 153 aa13.67□□□□□ -0.22
NKX2-1-202ENST00000498187 BAHCC1Q9P281 2608 aa13.67□□□□□ -0.22
NKX2-1-202ENST00000498187 KRTAP10-3P60369 221 aa13.66□□□□□ -0.22
NKX2-1-202ENST00000498187 C2orf48Q96LS8 159 aa13.66□□□□□ -0.22
NKX2-1-202ENST00000498187 C11orf68Q9H3H3 251 aaKnown RBP13.66□□□□□ -0.22
NKX2-1-202ENST00000498187 NCR3O14931 201 aa13.65□□□□□ -0.22
NKX2-1-202ENST00000498187 XCL1P47992 114 aa13.65□□□□□ -0.22
NKX2-1-202ENST00000498187 CRYGAP11844 174 aa13.64□□□□□ -0.23
NKX2-1-202ENST00000498187 RPL18AQ02543 176 aaKnown RBP13.64□□□□□ -0.23
NKX2-1-202ENST00000498187 SS18Q15532 418 aa13.64□□□□□ -0.23
NKX2-1-202ENST00000498187 SLPIP03973 132 aa13.64□□□□□ -0.23
NKX2-1-202ENST00000498187 Q8IZM0 81 aa13.64□□□□□ -0.23
NKX2-1-202ENST00000498187 IGKV3D-7A0A0C4DH55 119 aa13.63□□□□□ -0.23
NKX2-1-202ENST00000498187 X6R8D5 127 aa13.63□□□□□ -0.23
NKX2-1-202ENST00000498187 LINC00482Q8N8I6 264 aa13.63□□□□□ -0.23
NKX2-1-202ENST00000498187 FN1P02751 2386 aaKnown RBP13.62□□□□□ -0.23
NKX2-1-202ENST00000498187 A0A1B0GX51 115 aa13.62□□□□□ -0.23
NKX2-1-202ENST00000498187 CLPSL2Q6UWE3 100 aa13.62□□□□□ -0.23
NKX2-1-202ENST00000498187 A0A096LPF7 62 aa13.62□□□□□ -0.23
NKX2-1-202ENST00000498187 A0A1B0GUV1 79 aa13.61□□□□□ -0.23
NKX2-1-202ENST00000498187 LINC01561Q8N1V8 128 aa13.61□□□□□ -0.23
NKX2-1-202ENST00000498187 PRO0255Q9UI72 69 aa13.61□□□□□ -0.23
NKX2-1-202ENST00000498187 SMR3AQ99954 134 aa13.6□□□□□ -0.23
NKX2-1-202ENST00000498187 CCKP06307 115 aa13.59□□□□□ -0.23
NKX2-1-202ENST00000498187 LINC00167Q96N53 147 aa13.59□□□□□ -0.23
NKX2-1-202ENST00000498187 JMJD7-PLA2G4BH0Y9G9 81 aa13.59□□□□□ -0.23
NKX2-1-202ENST00000498187 HIVEP1P15822 2718 aa13.58□□□□□ -0.23
NKX2-1-202ENST00000498187 SMIM9A6NGZ8 99 aa13.57□□□□□ -0.24
NKX2-1-202ENST00000498187 S100A7L2Q5SY68 101 aa13.57□□□□□ -0.24
NKX2-1-202ENST00000498187 NDUFC2O95298 119 aa13.56□□□□□ -0.24
NKX2-1-202ENST00000498187 Q8N814 137 aa13.56□□□□□ -0.24
NKX2-1-202ENST00000498187 TMEM256-PLSCR3K7ERE1 68 aa13.56□□□□□ -0.24
NKX2-1-202ENST00000498187 SERP2Q8N6R1 65 aa13.56□□□□□ -0.24
NKX2-1-202ENST00000498187 hADV29S1A0JD25 119 aa13.55□□□□□ -0.24
NKX2-1-202ENST00000498187 COX17Q14061 63 aa13.55□□□□□ -0.24
NKX2-1-202ENST00000498187 A0A087WVE0 104 aa13.54□□□□□ -0.24
NKX2-1-202ENST00000498187 NANOS2P60321 138 aaKnown RBP13.54□□□□□ -0.24
NKX2-1-202ENST00000498187 SPATA3Q8NHX4 192 aa13.54□□□□□ -0.24
NKX2-1-202ENST00000498187 HIVEP2P31629 2446 aa13.53□□□□□ -0.24
NKX2-1-202ENST00000498187 USP17L23D6RBM5 183 aa13.53□□□□□ -0.24
NKX2-1-202ENST00000498187 DEFB4AO15263 64 aa13.53□□□□□ -0.24
NKX2-1-202ENST00000498187 LINC00269Q8N2A0 174 aa13.53□□□□□ -0.24
NKX2-1-202ENST00000498187 J3KT08 172 aa13.52□□□□□ -0.24
NKX2-1-202ENST00000498187 LYRM9A8MSI8 78 aa13.52□□□□□ -0.25
NKX2-1-202ENST00000498187 PRR3P79522 188 aaKnown RBP13.51□□□□□ -0.25
NKX2-1-202ENST00000498187 DEFB135Q30KP9 77 aa13.51□□□□□ -0.25
NKX2-1-202ENST00000498187 ATP5EP2Q5VTU8 51 aa13.51□□□□□ -0.25
NKX2-1-202ENST00000498187 CD164L2Q6UWJ8 174 aa13.5□□□□□ -0.25
NKX2-1-202ENST00000498187 Q8N3U1 123 aa13.5□□□□□ -0.25
NKX2-1-202ENST00000498187 KIAA0087Q14695 138 aa13.5□□□□□ -0.25
NKX2-1-202ENST00000498187 C5orf47Q569G3 176 aa13.5□□□□□ -0.25
NKX2-1-202ENST00000498187 IGLV10-54A0A075B6I4 117 aa13.48□□□□□ -0.25
NKX2-1-202ENST00000498187 RPS28P62857 69 aaKnown RBP13.48□□□□□ -0.25
NKX2-1-202ENST00000498187 CHCHD10Q8WYQ3 142 aaPredicted RBP13.48□□□□□ -0.25
NKX2-1-202ENST00000498187 IGHV4-28A0A0C4DH34 117 aa13.48□□□□□ -0.25
NKX2-1-202ENST00000498187 ANGP03950 147 aaKnown RBP13.48□□□□□ -0.25
NKX2-1-202ENST00000498187 C9orf66Q5T8R8 295 aa13.48□□□□□ -0.25
NKX2-1-202ENST00000498187 NBEAL2Q6ZNJ1 2754 aa13.48□□□□□ -0.25
NKX2-1-202ENST00000498187 LOC107984640A0A0U1RRK4 108 aa13.47□□□□□ -0.25
NKX2-1-202ENST00000498187 UPK3BQ9BT76 320 aa13.47□□□□□ -0.25
NKX2-1-202ENST00000498187 NSD1Q96L73 2696 aaPredicted RBP13.47□□□□□ -0.25
NKX2-1-202ENST00000498187 TMEM258P61165 79 aa13.46□□□□□ -0.25
NKX2-1-202ENST00000498187 REG3AQ06141 175 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms