RNA–Protein interactions for RNA: ENST00000496205.1

CLK1-214, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 480 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-214ENST00000496205 SAA2P0DJI9 122 aaPredicted RBP1.24□□□□□ -2.21
CLK1-214ENST00000496205 COX17Q14061 63 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 WFDC2Q14508 124 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 ADIRFQ15847 76 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 SFTA2Q6UW10 78 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 SMIM4Q8WVI0 70 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 Q96NJ1 140 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 SDK1Q7Z5N4 2213 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 SPTBP11277 2137 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 PI4KAP42356 2102 aa1.24□□□□□ -2.21
CLK1-214ENST00000496205 NRAPQ86VF7 1730 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 LAMA2P24043 3122 aaKnown RBP1.23□□□□□ -2.21
CLK1-214ENST00000496205 F2Z2F3 143 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 H3BUT2 72 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 H7BZZ5 65 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 M0R135 149 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 IGLC2P0DOY2 106 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 IGLC3P0DOY3 106 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 LYNX1P0DP58 116 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 ACYP2P14621 99 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 PMCHL1Q16048 86 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 ETDBQ3ZM63 59 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 BVES-AS1Q5T3Y7 98 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 SMIM11BQ8TCY0 68 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 PLAC4Q8WY50 150 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 BPESC1Q9GZL8 116 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 ST20Q9HBF5 79 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 NXT2Q9NPJ8 142 aaKnown RBP1.23□□□□□ -2.21
CLK1-214ENST00000496205 LINC01558Q9Y6Z2 57 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 RGPD2P0DJD1 1756 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 ARFGEF2Q9Y6D5 1785 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 ATP7BP35670 1465 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 CD163L1Q9NR16 1453 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 DNAH12Q6ZR08 3092 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 LY75O60449 1722 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 EDC4Q6P2E9 1401 aaKnown RBP1.23□□□□□ -2.21
CLK1-214ENST00000496205 ANKARQ7Z5J8 1434 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 MUC6Q6W4X9 2439 aa1.23□□□□□ -2.21
CLK1-214ENST00000496205 LRP6O75581 1613 aa1.22□□□□□ -2.21
CLK1-214ENST00000496205 PAPPAQ13219 1627 aa1.22□□□□□ -2.21
CLK1-214ENST00000496205 PLIN4Q96Q06 1357 aa1.22□□□□□ -2.21
CLK1-214ENST00000496205 TULP4Q9NRJ4 1543 aa1.22□□□□□ -2.21
CLK1-214ENST00000496205 TRBV25-1A0A075B6N4 114 aa1.22□□□□□ -2.21
CLK1-214ENST00000496205 TRGV1A0A0A0MS02 117 aa1.22□□□□□ -2.21
CLK1-214ENST00000496205 A0A0G2JND7 137 aa1.22□□□□□ -2.21
CLK1-214ENST00000496205 RPL37P61927 97 aaKnown RBP1.22□□□□□ -2.21
CLK1-214ENST00000496205 NMSQ5H8A3 153 aa1.22□□□□□ -2.21
CLK1-214ENST00000496205 BAGE2Q86Y30 109 aa1.22□□□□□ -2.21
CLK1-214ENST00000496205 MKI67P46013 3256 aaKnown RBP1.21□□□□□ -2.21
CLK1-214ENST00000496205 KDM3BQ7LBC6 1761 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 NFAT5O94916 1531 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 TRAV1-2A0A0B4J238 106 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 CTXND1A0A1B0GTU2 59 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 MGPP08493 103 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 SMIM11AP58511 58 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 HEPN1Q6WQI6 88 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 Q6ZSA8 131 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 HIGD1BQ9P298 99 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 ASCC3Q8N3C0 2202 aaKnown RBP1.21□□□□□ -2.22
CLK1-214ENST00000496205 TECTAO75443 2155 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 A0A1B0GUL6 1792 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 COL14A1Q05707 1796 aaKnown RBP1.21□□□□□ -2.22
CLK1-214ENST00000496205 ANKRD36CQ5JPF3 1778 aa1.21□□□□□ -2.22
CLK1-214ENST00000496205 C4AP0C0L4 1744 aa1.2□□□□□ -2.22
CLK1-214ENST00000496205 C4BP0C0L5 1744 aa1.2□□□□□ -2.22
CLK1-214ENST00000496205 SPTBN5Q9NRC6 3674 aaKnown RBP1.2□□□□□ -2.22
CLK1-214ENST00000496205 HTTP42858 3142 aa1.2□□□□□ -2.22
CLK1-214ENST00000496205 UBR3Q6ZT12 1888 aa1.2□□□□□ -2.22
CLK1-214ENST00000496205 COL4A6Q14031 1691 aa1.2□□□□□ -2.22
CLK1-214ENST00000496205 K7EIL1 84 aa1.2□□□□□ -2.22
CLK1-214ENST00000496205 ARL2-SNX15V9GYD0 113 aa1.2□□□□□ -2.22
CLK1-214ENST00000496205 MUC3AQ02505 3323 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 LAMA3Q16787 3333 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 BCORQ6W2J9 1755 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 FLG2Q5D862 2391 aaPredicted RBP1.19□□□□□ -2.22
CLK1-214ENST00000496205 UMAD1C9J7I0 102 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 PIN1P1O15428 100 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 PDCD11Q14690 1871 aaKnown RBP1.19□□□□□ -2.22
CLK1-214ENST00000496205 HMGN3Q15651 99 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 NUP188Q5SRE5 1749 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 FAM223AQ8IWN6 122 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 DDX60Q8IY21 1712 aaKnown RBP1.19□□□□□ -2.22
CLK1-214ENST00000496205 TOGARAM1Q9Y4F4 1720 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 LAMA4Q16363 1823 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 NHSQ6T4R5 1651 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 DOCK11Q5JSL3 2073 aa1.19□□□□□ -2.22
CLK1-214ENST00000496205 LRRC37A2A6NM11 1700 aa1.18□□□□□ -2.22
CLK1-214ENST00000496205 DUOX1Q9NRD9 1551 aa1.18□□□□□ -2.22
CLK1-214ENST00000496205 BTAF1O14981 1849 aa1.18□□□□□ -2.22
CLK1-214ENST00000496205 GVQW2A0A096LPI5 108 aaPredicted RBP1.18□□□□□ -2.22
CLK1-214ENST00000496205 C7orf77A4D0Y5 90 aa1.18□□□□□ -2.22
CLK1-214ENST00000496205 PSMG4Q5JS54 123 aa1.18□□□□□ -2.22
CLK1-214ENST00000496205 CFAP126Q5VTH2 177 aa1.18□□□□□ -2.22
CLK1-214ENST00000496205 C18orf32Q8TCD1 76 aa1.18□□□□□ -2.22
CLK1-214ENST00000496205 C5P01031 1676 aa1.18□□□□□ -2.22
CLK1-214ENST00000496205 TRANK1O15050 2925 aa1.18□□□□□ -2.22
CLK1-214ENST00000496205 C1orf167Q5SNV9 1468 aa1.18□□□□□ -2.22
CLK1-214ENST00000496205 SCN7AQ01118 1682 aa1.17□□□□□ -2.22
CLK1-214ENST00000496205 A0A1B0GWA3 101 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms