RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 CKS1BP61024 79 aa14.9□□□□□ -0.02
HLA-C-209ENST00000495835 CDKN2A-AS1Q9UH64 79 aa14.89□□□□□ -0.03
HLA-C-209ENST00000495835 KRTAP10-8P60410 259 aa14.88□□□□□ -0.03
HLA-C-209ENST00000495835 TOMM7Q9P0U1 55 aa14.88□□□□□ -0.03
HLA-C-209ENST00000495835 FAM168BA1KXE4 195 aa14.87□□□□□ -0.03
HLA-C-209ENST00000495835 C1orf137Q5JT78 98 aa14.87□□□□□ -0.03
HLA-C-209ENST00000495835 MRPL18Q9H0U6 180 aaKnown RBP14.86□□□□□ -0.03
HLA-C-209ENST00000495835 RPS10P5Q9NQ39 176 aa14.86□□□□□ -0.03
HLA-C-209ENST00000495835 TINCRA0A1B0GVN0 87 aa14.85□□□□□ -0.03
HLA-C-209ENST00000495835 CXCL5P42830 114 aa14.85□□□□□ -0.03
HLA-C-209ENST00000495835 FABP9Q0Z7S8 132 aa14.85□□□□□ -0.03
HLA-C-209ENST00000495835 ODF1Q14990 250 aa14.85□□□□□ -0.03
HLA-C-209ENST00000495835 FAM19A5Q7Z5A7 132 aaPredicted RBP14.85□□□□□ -0.03
HLA-C-209ENST00000495835 F8VRH5 84 aa14.83□□□□□ -0.04
HLA-C-209ENST00000495835 FA2HQ7L5A8 372 aa14.83□□□□□ -0.04
HLA-C-209ENST00000495835 SMCO4Q9NRQ5 59 aa14.83□□□□□ -0.04
HLA-C-209ENST00000495835 IGLV5-45A0A087WSX0 123 aa14.82□□□□□ -0.04
HLA-C-209ENST00000495835 M0QXV9 152 aa14.82□□□□□ -0.04
HLA-C-209ENST00000495835 IGLV7-43P04211 117 aa14.82□□□□□ -0.04
HLA-C-209ENST00000495835 PDZD11Q5EBL8 140 aa14.82□□□□□ -0.04
HLA-C-209ENST00000495835 C9orf129Q5T035 196 aaKnown RBP14.82□□□□□ -0.04
HLA-C-209ENST00000495835 KRTAP7-1Q8IUC3 87 aa14.82□□□□□ -0.04
HLA-C-209ENST00000495835 LINC00469Q8N7U9 141 aa14.81□□□□□ -0.04
HLA-C-209ENST00000495835 CST9LQ9H4G1 147 aa14.81□□□□□ -0.04
HLA-C-209ENST00000495835 PMVKQ15126 192 aa14.8□□□□□ -0.04
HLA-C-209ENST00000495835 DIRC1Q969H9 104 aa14.8□□□□□ -0.04
HLA-C-209ENST00000495835 UBR4Q5T4S7 5183 aa14.79□□□□□ -0.04
HLA-C-209ENST00000495835 SMIM1B2RUZ4 78 aa14.79□□□□□ -0.04
HLA-C-209ENST00000495835 UBE2BP63146 152 aa14.78□□□□□ -0.04
HLA-C-209ENST00000495835 KRTAP11-1Q8IUC1 163 aa14.77□□□□□ -0.05
HLA-C-209ENST00000495835 COX7B2Q8TF08 81 aa14.76□□□□□ -0.05
HLA-C-209ENST00000495835 TRAPPC1Q9Y5R8 145 aa14.76□□□□□ -0.05
HLA-C-209ENST00000495835 SNAPINO95295 136 aa14.74□□□□□ -0.05
HLA-C-209ENST00000495835 LINC00614P0C842 121 aa14.74□□□□□ -0.05
HLA-C-209ENST00000495835 NDUFA5Q16718 116 aa14.74□□□□□ -0.05
HLA-C-209ENST00000495835 H0Y9J4 135 aa14.73□□□□□ -0.05
HLA-C-209ENST00000495835 H3BRM9 83 aa14.73□□□□□ -0.05
HLA-C-209ENST00000495835 LBHQ53QV2 105 aaPredicted RBP14.73□□□□□ -0.05
HLA-C-209ENST00000495835 APOC3P02656 99 aa14.72□□□□□ -0.05
HLA-C-209ENST00000495835 SVBPQ8N300 66 aa14.72□□□□□ -0.05
HLA-C-209ENST00000495835 C18orf32Q8TCD1 76 aa14.72□□□□□ -0.05
HLA-C-209ENST00000495835 TP73-AS1Q9UF72 201 aa14.72□□□□□ -0.05
HLA-C-209ENST00000495835 XAGE1AQ9HD64 81 aa14.71□□□□□ -0.05
HLA-C-209ENST00000495835 C22orf24Q9Y442 160 aa14.71□□□□□ -0.05
HLA-C-209ENST00000495835 NUPR1O60356 82 aa14.7□□□□□ -0.06
HLA-C-209ENST00000495835 RAB5BP61020 215 aa14.7□□□□□ -0.06
HLA-C-209ENST00000495835 A0A096LNJ9 63 aa14.69□□□□□ -0.06
HLA-C-209ENST00000495835 HBDP02042 147 aa14.69□□□□□ -0.06
HLA-C-209ENST00000495835 IGLC3P0DOY3 106 aa14.69□□□□□ -0.06
HLA-C-209ENST00000495835 URB1-AS1Q96HZ7 61 aa14.68□□□□□ -0.06
HLA-C-209ENST00000495835 SPINK8P0C7L1 97 aa14.67□□□□□ -0.06
HLA-C-209ENST00000495835 ATP5LO75964 103 aa14.65□□□□□ -0.06
HLA-C-209ENST00000495835 IGLV1-50A0A075B6I6 118 aa14.64□□□□□ -0.07
HLA-C-209ENST00000495835 IGLV5-39A0A0G2JS06 123 aa14.64□□□□□ -0.07
HLA-C-209ENST00000495835 MRPL55Q7Z7F7 128 aaKnown RBP14.64□□□□□ -0.07
HLA-C-209ENST00000495835 LRP2P98164 4655 aa14.64□□□□□ -0.07
HLA-C-209ENST00000495835 ZNF861PO60384 105 aa14.63□□□□□ -0.07
HLA-C-209ENST00000495835 NDUFA6P56556 154 aa14.63□□□□□ -0.07
HLA-C-209ENST00000495835 KRTAP1-4P0C5Y4 121 aa14.6□□□□□ -0.07
HLA-C-209ENST00000495835 ZNF22P17026 224 aaPredicted RBP14.6□□□□□ -0.07
HLA-C-209ENST00000495835 PRR26Q8N8Z3 221 aa14.6□□□□□ -0.07
HLA-C-209ENST00000495835 IGLV5-37A0A075B6J1 123 aa14.59□□□□□ -0.07
HLA-C-209ENST00000495835 SFTA2Q6UW10 78 aa14.59□□□□□ -0.07
HLA-C-209ENST00000495835 YPEL4Q96NS1 127 aa14.58□□□□□ -0.08
HLA-C-209ENST00000495835 COX17Q14061 63 aa14.57□□□□□ -0.08
HLA-C-209ENST00000495835 PMCHL1Q16048 86 aa14.57□□□□□ -0.08
HLA-C-209ENST00000495835 BAGE3Q86Y29 109 aa14.57□□□□□ -0.08
HLA-C-209ENST00000495835 CHCHD1Q96BP2 118 aaKnown RBP14.57□□□□□ -0.08
HLA-C-209ENST00000495835 RPL13AP40429 203 aaKnown RBP14.56□□□□□ -0.08
HLA-C-209ENST00000495835 LINC00167Q96N53 147 aa14.56□□□□□ -0.08
HLA-C-209ENST00000495835 BCE1O60756 84 aa14.55□□□□□ -0.08
HLA-C-209ENST00000495835 RPL28P46779 137 aaKnown RBP14.54□□□□□ -0.08
HLA-C-209ENST00000495835 NKAPP1Q8N9T2 125 aa14.54□□□□□ -0.08
HLA-C-209ENST00000495835 C11orf86A6NJI1 115 aa14.53□□□□□ -0.08
HLA-C-209ENST00000495835 TRAV12-1A0A0B4J245 112 aa14.51□□□□□ -0.09
HLA-C-209ENST00000495835 PFN2P35080 140 aa14.51□□□□□ -0.09
HLA-C-209ENST00000495835 TMEM170BQ5T4T1 132 aa14.51□□□□□ -0.09
HLA-C-209ENST00000495835 ERG28Q9UKR5 140 aa14.51□□□□□ -0.09
HLA-C-209ENST00000495835 CHTOPQ9Y3Y2 248 aaKnown RBP14.51□□□□□ -0.09
HLA-C-209ENST00000495835 RPL37AP8A6NKH3 93 aa14.49□□□□□ -0.09
HLA-C-209ENST00000495835 RPL24P83731 157 aaKnown RBP14.47□□□□□ -0.09
HLA-C-209ENST00000495835 IFI27L1Q96BM0 104 aa14.47□□□□□ -0.09
HLA-C-209ENST00000495835 SND1-IT1Q9HBX3 110 aa14.47□□□□□ -0.09
HLA-C-209ENST00000495835 ZNF625Q96I27 306 aaPredicted RBP14.46□□□□□ -0.09
HLA-C-209ENST00000495835 GAGE10A6NGK3 116 aa14.45□□□□□ -0.1
HLA-C-209ENST00000495835 VPREB1P12018 145 aa14.44□□□□□ -0.1
HLA-C-209ENST00000495835 TMEM223A0PJW6 202 aa14.43□□□□□ -0.1
HLA-C-209ENST00000495835 HSBP1O75506 76 aa14.43□□□□□ -0.1
HLA-C-209ENST00000495835 KRTAP13-1Q8IUC0 172 aa14.41□□□□□ -0.1
HLA-C-209ENST00000495835 CBLN2Q8IUK8 224 aa14.41□□□□□ -0.1
HLA-C-209ENST00000495835 UBE2AP49459 152 aa14.39□□□□□ -0.11
HLA-C-209ENST00000495835 IGKV2-28A0A075B6P5 120 aa14.38□□□□□ -0.11
HLA-C-209ENST00000495835 IGKV2D-28P01615 120 aa14.38□□□□□ -0.11
HLA-C-209ENST00000495835 TRGC2P03986 189 aa14.37□□□□□ -0.11
HLA-C-209ENST00000495835 CRYGAP11844 174 aa14.37□□□□□ -0.11
HLA-C-209ENST00000495835 LINC00158P58513 81 aa14.36□□□□□ -0.11
HLA-C-209ENST00000495835 FAM19A2Q8N3H0 131 aa14.36□□□□□ -0.11
HLA-C-209ENST00000495835 SCO1O75880 301 aa14.35□□□□□ -0.11
HLA-C-209ENST00000495835 HERV-K104P63124 156 aa14.35□□□□□ -0.11
HLA-C-209ENST00000495835 TMEM126AQ9H061 195 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms